| Microexon ID | Bn_scaffoldC01:51091866-51091874:+ |
| Species | Brassica Napus | Coordinates | scaffoldC01:51091866..51091874 |
| Microexon Cluster ID | MEP22 |
| Size | 9 |
| Phase | 1 |
| Pfam Domain Motif | Glyco_hydro_32N |
| Structure of Microexon-tag (flanking exon, microexon, flanking exon sizes) | 49,9,50 |
| Microexon location in the Microexon-tag | 2 |
| Microexon-tag DNA Seq | YSKYAMMGRACYGSYTWYCAYTTYCARCCYSMCAARAAYTGGATGAAYGATCCYAAYGGTCCAATGTWYTACAAGGGATKGTACCAYYTSTTCTAYCARTACAAYCCV |
| Logo of Microexon-tag DNA Seq |  |
| Alignment of exons |  |
| Microexon DNA seq | ATCCTAATG |
| Microexon Amino Acid seq | DPNG |
| Microexon-tag DNA Seq | CCCTACCGGACCGGCTTCCATTTTCAACCACCCAAGAATTGGATGAACGATCCTAATGGCCCTATGATATACAAAGGAATATATCATCTTTTCTACCAATGGAACCCC |
| Microexon-tag Amino Acid Seq | PYRTGFHFQPPKNWMNDPNGPMIYKGIYHLFYQWNP |
| Microexon-tag spanning region | 51091693-51092124 |
| Microexon-tag prediction score | 0.9445 |
| Overlapped with the annotated transcript (%) | 100 |
| New Transcript ID | BnaC01T0444800ZSx |
| Reference Transcript ID | BnaC01T0444800ZS |
| Gene ID | BnaC01G0444800ZS |
| Gene Name | NA |
| Transcript ID | BnaC01T0444800ZS |
| Protein ID | |
| Gene ID | BnaC01G0444800ZS |
| Gene Name | |
| Pfam domain motif | Glyco_hydro_32N |
| Motif E-value | 4.60E-108 |
| Motif start | 56 |
| Motif end | 378 |
| Protein seq | >BnaC01T0444800ZS MTKEVCSNIGLWLLFTLLLSNYVVDLEASHHVYNRLTQSSNIKSPSVNQPYRTGFHFQPPKNWMNDPNGPMIYKGIYHLF YQWNPKGAVWGNIVWAHSTSTDLINWDPHPPAIFPSEPFDINGCWSGSATILPDGKPVILYTGIDPKNQQVQNIAEPKDL SDPYLVEWKKSPLNPLMAPDAVNGINASSFRDPTTAWLGHDKKWRVIIGSKIHRRGLAITYTSKDFLKWEKSPEPLHYDD GSGMWECPDFFPVTRFGSKGVETSSFGEPNEVLKHVLKISLDDTKHDYYTIGTYDRVGDKFVPDKGFKMDGTAPRYDYGK YYASKTFYDSAKNRRVLWGWTNESSSVEDDVEKGWSGIQTIPRKIWLDRSGKQLIQWPVRELERLRMKQVNLRNKVLNSR SRLEVYGVTAAQADVEVLFKVRNLEKADVIQPSWTDPQLICSKMNVSVESGLGPFGLMVLASKNLEEYTSVYFRIFKARQ NSNKYVVVMCSDQSRSSLEEDNDKTTYGAFVDINPRQPLSLRALIDHSVVESFGGRGRACITSRVYPKLAMGKNSHLFAF NYGSQSVDVLSLSAWSMKSAQIS* |
| CDS seq | >BnaC01T0444800ZS ATGACCAAAGAAGTTTGCTCCAACATTGGACTTTGGTTGTTATTCACGTTACTTCTTAGTAACTATGTCGTCGATCTCGA GGCCTCGCACCATGTGTACAACAGACTTACCCAAAGCTCTAACATCAAATCTCCTTCCGTAAACCAGCCCTACCGGACCG GCTTCCATTTTCAACCACCCAAGAATTGGATGAACGATCCTAATGGCCCTATGATATACAAAGGAATATATCATCTTTTC TACCAATGGAACCCCAAAGGCGCCGTGTGGGGTAACATCGTGTGGGCTCATTCCACATCAACAGACTTAATCAACTGGGA CCCACATCCTCCGGCTATCTTCCCGTCTGAGCCGTTTGATATCAACGGATGCTGGTCCGGTTCGGCTACAATCCTCCCCG ACGGCAAACCAGTTATCCTCTATACCGGAATCGACCCCAAGAACCAACAGGTTCAAAACATAGCCGAGCCTAAAGATCTC TCCGATCCATACCTCGTGGAATGGAAAAAGTCACCGTTAAATCCTCTGATGGCTCCTGATGCCGTCAACGGAATCAACGC CAGCTCGTTCCGTGACCCAACAACCGCGTGGCTAGGGCACGACAAGAAATGGAGAGTGATCATCGGAAGCAAGATCCACC GTCGTGGACTAGCGATCACTTACACGAGCAAAGACTTTCTAAAATGGGAAAAATCTCCTGAGCCGTTGCATTATGACGAC GGAAGTGGAATGTGGGAGTGTCCTGACTTTTTCCCCGTGACGAGGTTTGGCTCTAAAGGCGTGGAAACGTCGTCTTTTGG TGAACCAAATGAGGTTTTAAAACACGTGTTGAAAATAAGCTTGGATGACACGAAACATGATTATTACACGATCGGTACGT ACGACCGGGTTGGTGATAAGTTCGTACCCGACAAGGGTTTTAAAATGGACGGTACAGCTCCTAGGTACGATTACGGAAAG TACTATGCTTCGAAAACGTTTTACGACTCGGCCAAGAACCGAAGAGTGTTGTGGGGTTGGACTAACGAGTCGTCATCGGT TGAGGATGATGTTGAGAAAGGCTGGTCCGGTATTCAGACGATTCCAAGGAAAATTTGGCTTGATCGGTCCGGGAAACAAC TGATTCAATGGCCGGTTAGGGAATTAGAGAGATTACGTATGAAGCAAGTCAACTTACGTAACAAAGTTTTAAATTCAAGA TCTAGACTTGAAGTCTATGGTGTGACAGCTGCACAGGCGGATGTGGAGGTTTTGTTCAAAGTGAGAAACTTGGAGAAAGC GGATGTGATACAACCAAGTTGGACTGATCCACAGTTGATTTGTAGTAAGATGAATGTGTCGGTTGAGTCAGGTTTAGGTC CATTCGGTTTAATGGTTCTCGCATCTAAGAACTTGGAAGAGTACACATCCGTTTATTTTAGAATCTTCAAAGCCCGGCAA AACAGCAATAAGTACGTTGTGGTCATGTGCAGTGACCAAAGCAGATCTTCATTGGAAGAAGATAATGACAAAACAACTTA TGGAGCTTTTGTGGATATTAATCCTCGCCAACCACTCTCCCTCAGAGCCTTGATTGATCATTCAGTAGTGGAGAGCTTCG GTGGACGAGGAAGAGCATGCATTACCTCCAGAGTGTATCCAAAACTGGCAATGGGAAAAAATTCACATCTCTTTGCTTTT AACTATGGATCTCAAAGTGTTGATGTCTTAAGCTTAAGTGCTTGGAGCATGAAGTCTGCCCAAATCAGTTGA |
Bn_scaffoldC01:51091866-51091874:+ does not have available information here.