| Microexon ID | Bn_scaffoldA09:9624235-9624243:- |
| Species | Brassica Napus | Coordinates | scaffoldA09:9624235..9624243 |
| Microexon Cluster ID | MEP22 |
| Size | 9 |
| Phase | 1 |
| Pfam Domain Motif | Glyco_hydro_32N |
| Structure of Microexon-tag (flanking exon, microexon, flanking exon sizes) | 49,9,50 |
| Microexon location in the Microexon-tag | 2 |
| Microexon-tag DNA Seq | YSKYAMMGRACYGSYTWYCAYTTYCARCCYSMCAARAAYTGGATGAAYGATCCYAAYGGTCCAATGTWYTACAAGGGATKGTACCAYYTSTTCTAYCARTACAAYCCV |
| Logo of Microexon-tag DNA Seq |  |
| Alignment of exons |  |
| Microexon DNA seq | ATCCTAATG |
| Microexon Amino Acid seq | DPNG |
| Microexon-tag DNA Seq | TGGCAACGAACTGCGTTTCATTTCCAACCTGAGAAAAATTGGATGAACGATCCTAATGGTCCATTGTTTTACAAGGGATGGTACCATTTCTTCTATCAATACAACCCA |
| Microexon-tag Amino Acid Seq | WQRTAFHFQPEKNWMNDPNGPLFYKGWYHFFYQYNP |
| Microexon-tag spanning region | 9623433-9624648 |
| Microexon-tag prediction score | 0.9745 |
| Overlapped with the annotated transcript (%) | 100 |
| New Transcript ID | BnaA09T0154800ZSx |
| Reference Transcript ID | BnaA09T0154800ZS |
| Gene ID | BnaA09G0154800ZS |
| Gene Name | NA |
| Transcript ID | BnaA09T0154800ZS |
| Protein ID | |
| Gene ID | BnaA09G0154800ZS |
| Gene Name | |
| Pfam domain motif | Glyco_hydro_32N |
| Motif E-value | 3.00E-104 |
| Motif start | 116 |
| Motif end | 436 |
| Protein seq | >BnaA09T0154800ZS MASSESLLPVSSQQDPLSDSRCDSIPESRRRRPIKVHLAIYSGFLLIALYVTLIITHGGSAPKNDVNDDTTVESRARLAG VSEKSNDHIWNLSNDLKGEAFAWNNTVLSWQRTAFHFQPEKNWMNDPNGPLFYKGWYHFFYQYNPNAAVWGDIVWGHAVS KDLIHWLYLPFAMVPDQWYDANGVWTGSATFLDDGSIVMLYTGSTDKFVQVQNLAYPEDPKDPLLLKWTKFSGNPVLVPP PGIGAKDFRDPTTAWKTSDGKWRITIGSKINRTGISLIYDTTDFKTYEKHETLLHQVPNTGMWECVDFYPVSKTKDKGLD TSVNGPDVKHIIKASMDDTRIDHYAIGTYYDSNATWVPDNPSIDVGISTGLRYDYGKFYASKTFYDQHKGRRILWGWIGE SDSEAADVQKGWSSVQGIPRTVALDTKTGKNLVQWPVKEIESLRLGRKKFHMKVEPGTVVPVDVGPAAQLDIEAEFKIKK DDLEVVFGDDSVEDDKEFSCETSGGATVRGALGPFGFSVLADQSLSEQTQVYFYVTKGKDSKLKTFFCTDTSRSTMANDV VKPVYGSFVPVLRGEKLTMRILVDHSIIEGFGQGGRTCITSRVYPTKAIYGATRLFLFNNAIDATITASFKVWQMNSAFI HPFSADDLGVPSST* |
| CDS seq | >BnaA09T0154800ZS ATGGCAAGCTCTGAATCTCTCTTGCCGGTTAGCTCTCAGCAAGATCCATTATCTGATTCAAGATGCGACTCTATCCCGGA GAGCCGGAGAAGAAGACCTATCAAAGTTCATCTCGCCATCTATTCTGGTTTTCTTTTGATTGCTTTATACGTTACTCTCA TCATTACACACGGCGGATCCGCACCCAAAAATGATGTCAATGATGACACGACGGTGGAGTCACGTGCTCGTTTGGCCGGC GTGTCGGAAAAGAGCAACGACCATATTTGGAATCTTTCCAATGATCTGAAAGGAGAAGCGTTTGCCTGGAACAATACTGT GTTGTCGTGGCAACGAACTGCGTTTCATTTCCAACCTGAGAAAAATTGGATGAACGATCCTAATGGTCCATTGTTTTACA AGGGATGGTACCATTTCTTCTATCAATACAACCCAAATGCAGCCGTGTGGGGTGACATTGTTTGGGGTCACGCTGTATCA AAGGATCTTATCCACTGGCTTTACCTCCCATTTGCCATGGTTCCTGACCAATGGTACGATGCTAACGGCGTTTGGACCGG TTCAGCTACTTTCCTTGATGATGGTTCTATTGTCATGCTCTACACTGGTTCCACCGACAAATTCGTACAGGTTCAAAACC TTGCCTATCCTGAAGACCCAAAAGATCCACTTTTGTTGAAATGGACCAAGTTCTCCGGCAACCCGGTTCTTGTACCACCT CCAGGTATCGGTGCTAAGGACTTCCGTGACCCAACAACTGCATGGAAGACTTCAGACGGGAAATGGCGGATCACTATTGG CTCCAAAATCAACAGAACCGGAATATCTCTTATTTACGATACAACAGATTTCAAGACCTACGAGAAACATGAGACCTTGT TGCACCAAGTCCCAAACACTGGAATGTGGGAGTGTGTTGACTTTTATCCAGTGTCCAAGACTAAAGACAAGGGTCTTGAC ACTTCGGTCAATGGACCGGATGTTAAGCATATCATTAAGGCTAGCATGGACGATACTAGAATTGACCATTATGCCATTGG GACATACTATGACTCTAATGCAACATGGGTCCCCGACAATCCTTCAATCGATGTCGGGATTAGTACCGGTTTGAGATATG ATTACGGTAAATTTTATGCATCCAAGACGTTTTATGATCAACATAAGGGACGAAGAATCTTATGGGGTTGGATTGGTGAA TCTGATAGCGAAGCAGCTGATGTACAGAAGGGTTGGTCTTCTGTTCAGGGCATCCCTAGAACTGTTGCATTGGACACAAA GACAGGGAAGAACTTAGTCCAGTGGCCAGTTAAGGAAATTGAGTCTCTGAGATTAGGACGCAAGAAGTTCCACATGAAGG TTGAACCAGGGACGGTGGTTCCGGTTGATGTAGGTCCCGCCGCTCAGCTAGACATAGAGGCTGAGTTCAAGATTAAGAAG GACGATCTCGAAGTAGTCTTTGGAGATGACTCCGTGGAGGACGACAAGGAGTTCAGCTGTGAAACAAGCGGTGGAGCCAC CGTACGTGGGGCTTTAGGACCTTTCGGATTCTCGGTTCTTGCTGACCAAAGCTTGTCGGAACAAACTCAGGTTTACTTCT ATGTGACTAAGGGAAAAGATTCGAAACTCAAAACGTTCTTCTGCACTGACACCTCAAGGTCGACCATGGCAAATGATGTT GTGAAACCGGTATATGGAAGCTTCGTACCGGTTCTAAGAGGAGAGAAATTGACCATGAGAATCTTGGTGGATCATTCGAT AATAGAGGGGTTTGGACAAGGTGGAAGAACATGTATTACCTCAAGGGTTTATCCAACGAAGGCCATCTACGGAGCTACAA GGCTTTTCTTGTTCAACAATGCTATTGATGCGACTATTACGGCGTCGTTTAAGGTGTGGCAAATGAACAGTGCTTTTATT CATCCTTTCTCTGCGGACGATTTGGGTGTTCCTTCTAGCACCTGA |
Bn_scaffoldA09:9624235-9624243:- does not have available information here.