| Microexon ID | Bn_scaffoldA09:62057331-62057339:- |
| Species | Brassica Napus | Coordinates | scaffoldA09:62057331..62057339 |
| Microexon Cluster ID | MEP22 |
| Size | 9 |
| Phase | 1 |
| Pfam Domain Motif | Glyco_hydro_32N |
| Structure of Microexon-tag (flanking exon, microexon, flanking exon sizes) | 49,9,50 |
| Microexon location in the Microexon-tag | 2 |
| Microexon-tag DNA Seq | YSKYAMMGRACYGSYTWYCAYTTYCARCCYSMCAARAAYTGGATGAAYGATCCYAAYGGTCCAATGTWYTACAAGGGATKGTACCAYYTSTTCTAYCARTACAAYCCV |
| Logo of Microexon-tag DNA Seq |  |
| Alignment of exons |  |
| Microexon DNA seq | ATCCTAATG |
| Microexon Amino Acid seq | DPNG |
| Microexon-tag DNA Seq | TGGCAACGAACGGCCTTTCATTTTCAGCCTGAACAGAATTGGATGAACGATCCTAATGGTCCATTGTTCTACAAAGGATGGTACCATTTCTTCTACCAGTATAATCCA |
| Microexon-tag Amino Acid Seq | WQRTAFHFQPEQNWMNDPNGPLFYKGWYHFFYQYNP |
| Microexon-tag spanning region | 62056757-62057773 |
| Microexon-tag prediction score | 0.9707 |
| Overlapped with the annotated transcript (%) | 100 |
| New Transcript ID | BnaA09T0648600ZSx |
| Reference Transcript ID | BnaA09T0648600ZS |
| Gene ID | BnaA09G0648600ZS |
| Gene Name | NA |
| Transcript ID | BnaA09T0648600ZS |
| Protein ID | |
| Gene ID | BnaA09G0648600ZS |
| Gene Name | |
| Pfam domain motif | Glyco_hydro_32N |
| Motif E-value | 7.80E-103 |
| Motif start | 124 |
| Motif end | 444 |
| Protein seq | >BnaA09T0648600ZS MASSDALLPISAREEDPLVSDGSRSDPNAETHRRKRPVKGLLAVSFGLLFIAFYVVLIATHHGSSRSNDVKIESDETATT TSRARLAGVSEKSNDQLWKLSGERNTVSFAWNNSVLSWQRTAFHFQPEQNWMNDPNGPLFYKGWYHFFYQYNPNAAVWGD IVWGHAVSKDLIHWVHLPIAMVADQWYDANGVWTGSATFLDDGSLVMLYTGSTDKSVQVQNLAYPEDLNDPLLLKWVKYS GNPVLVPPPGILPKDFRDPTTAWKTSDGKWRITIGSKINKTGISLVYDTIDFKTYEKHDTLLHKVPNTGMWECVDFYPVS KTAINGLDTSVNGPNVKHIVKASMDDTRFDHYAVGTYFDSNGTWIPDDPTIDVGMSASLRYDYGKFYASKTFYDQNKGRR ILWSWIGESDSEAADVQKGWSSLQGIPRTVVLDTKTGKNLVQWPVEEIKSLRLSSKQFDMEVGPGSVVPVDVNTATQLDI EAEFEIKKETLDKILGDSSVVAEAEEFSCQKSGGSTVRGALGPFGFSVLADKSLSEQTPVYFYVAKGKDSKLKAFFCTDT SRSTFANDVVKPIYGSSVPVLEGEKLTMRILVDHSIVEGFAQGGRTCITSRVYPTKAIYGAAKLFVFNNAIDATVTASFK VWQMNSAFIHPYFEEAVRALSST* |
| CDS seq | >BnaA09T0648600ZS ATGGCGAGCTCCGATGCTCTCTTGCCAATCTCCGCCAGAGAAGAAGACCCATTAGTATCCGACGGGTCAAGATCCGACCC TAACGCGGAAACCCATCGCCGTAAAAGACCCGTTAAAGGTCTCCTCGCCGTCTCATTTGGGCTTTTGTTTATCGCCTTTT ACGTCGTTCTCATCGCCACACACCACGGATCTAGTAGATCCAACGACGTTAAAATCGAAAGCGATGAAACAGCGACGACA ACGTCACGTGCCCGTCTTGCCGGCGTATCGGAGAAAAGCAATGATCAGTTGTGGAAGCTTTCCGGTGAGCGGAATACGGT GTCGTTCGCTTGGAACAACAGTGTGTTGTCATGGCAACGAACGGCCTTTCATTTTCAGCCTGAACAGAATTGGATGAACG ATCCTAATGGTCCATTGTTCTACAAAGGATGGTACCATTTCTTCTACCAGTATAATCCAAACGCAGCCGTATGGGGTGAT ATTGTTTGGGGTCATGCCGTGTCTAAGGACCTAATCCATTGGGTCCATTTGCCCATAGCCATGGTAGCTGATCAATGGTA TGATGCCAATGGTGTCTGGACAGGCTCAGCCACATTCCTCGATGATGGCTCTCTCGTCATGTTGTACACTGGTTCCACCG ACAAATCCGTTCAGGTCCAAAATCTTGCATACCCTGAGGACCTCAACGACCCACTCCTATTGAAATGGGTCAAGTACTCA GGCAATCCGGTTCTAGTACCTCCTCCTGGCATTCTCCCCAAGGACTTCCGTGACCCAACGACTGCATGGAAGACATCAGA TGGAAAATGGCGGATCACAATCGGTTCCAAGATCAACAAAACCGGGATCTCACTAGTGTACGACACAATCGACTTCAAGA CTTACGAGAAACACGACACATTGTTGCACAAGGTTCCAAACACGGGGATGTGGGAGTGTGTTGACTTCTATCCAGTGTCT AAGACCGCGATCAATGGGCTCGACACATCAGTCAACGGACCAAATGTGAAGCACATCGTGAAGGCTAGCATGGACGACAC CAGGTTTGATCATTATGCCGTGGGGACGTACTTTGATTCGAACGGAACATGGATCCCGGATGATCCTACTATTGATGTTG GGATGAGTGCTAGTTTGAGATATGATTACGGAAAGTTCTATGCTTCAAAGACGTTTTATGACCAAAACAAGGGTCGAAGA ATCTTGTGGAGTTGGATTGGTGAATCTGATAGTGAGGCAGCTGATGTACAAAAGGGCTGGTCTTCTCTTCAGGGTATCCC AAGAACCGTTGTTCTCGACACAAAGACAGGGAAGAACTTGGTCCAATGGCCAGTGGAAGAAATAAAATCCCTTAGATTAA GCAGCAAGCAATTTGATATGGAAGTTGGTCCTGGTTCAGTGGTACCGGTCGATGTGAATACCGCAACTCAGCTAGACATT GAAGCAGAGTTCGAGATCAAGAAAGAGACTCTTGACAAAATCCTTGGAGATTCATCGGTGGTGGCTGAAGCTGAGGAGTT TAGCTGCCAGAAGAGCGGTGGATCTACTGTCCGTGGTGCGTTAGGACCGTTTGGATTCTCGGTTCTCGCCGATAAGAGCT TGTCGGAGCAAACTCCGGTTTACTTCTACGTGGCTAAGGGAAAAGATTCCAAGCTCAAAGCTTTCTTCTGCACAGATACT TCAAGGTCAACGTTTGCCAACGATGTCGTTAAGCCGATTTATGGTAGTTCTGTACCGGTTCTAGAAGGAGAGAAATTGAC CATGAGAATACTGGTGGATCATTCGATAGTAGAAGGATTCGCACAAGGTGGAAGAACATGCATAACGTCAAGGGTATATC CAACAAAAGCCATCTATGGAGCAGCTAAGCTTTTTGTATTCAACAATGCCATTGATGCGACTGTTACGGCGTCGTTCAAA GTCTGGCAAATGAACAGTGCTTTTATTCACCCTTACTTTGAGGAAGCTGTCCGTGCTCTCTCCAGCACCTGA |
Bn_scaffoldA09:62057331-62057339:- does not have available information here.