| Microexon ID | Bn_scaffoldA06:544923-544931:- |
| Species | Brassica Napus | Coordinates | scaffoldA06:544923..544931 |
| Microexon Cluster ID | MEP22 |
| Size | 9 |
| Phase | 1 |
| Pfam Domain Motif | Glyco_hydro_32N |
| Structure of Microexon-tag (flanking exon, microexon, flanking exon sizes) | 49,9,50 |
| Microexon location in the Microexon-tag | 2 |
| Microexon-tag DNA Seq | YSKYAMMGRACYGSYTWYCAYTTYCARCCYSMCAARAAYTGGATGAAYGATCCYAAYGGTCCAATGTWYTACAAGGGATKGTACCAYYTSTTCTAYCARTACAAYCCV |
| Logo of Microexon-tag DNA Seq |  |
| Alignment of exons |  |
| Microexon DNA seq | ATCCTAATG |
| Microexon Amino Acid seq | DPNG |
| Microexon-tag DNA Seq | CCGTACCGGACCGGTTATCACTTTCAACCTCCCAGTAATTGGATGAACGATCCTAATGGACCAATGGTATACAAGGGAATATACCATCTTTTCTACCAGTACAACCCA |
| Microexon-tag Amino Acid Seq | PYRTGYHFQPPSNWMNDPNGPMVYKGIYHLFYQYNP |
| Microexon-tag spanning region | 544796-545102 |
| Microexon-tag prediction score | 0.9584 |
| Overlapped with the annotated transcript (%) | 100 |
| New Transcript ID | BnaA06T0006300ZSx |
| Reference Transcript ID | BnaA06T0006300ZS |
| Gene ID | BnaA06G0006300ZS |
| Gene Name | NA |
| Transcript ID | BnaA06T0006300ZS |
| Protein ID | |
| Gene ID | BnaA06G0006300ZS |
| Gene Name | |
| Pfam domain motif | Glyco_hydro_32N |
| Motif E-value | 1.50E-104 |
| Motif start | 35 |
| Motif end | 355 |
| Protein seq | >BnaA06T0006300ZS MGKTLLLLSLLLCSFIIDLEASRQDLNQPYRTGYHFQPPSNWMNDPNGPMVYKGIYHLFYQYNPYGAVWDVRIVWGHSTS LDLVNWTPQPPAFSPSQPSDINGCWSGSVTILPNGTPVILYTGIDQNKSQVQNVAVPVNISDPYLREWSKSPANPLMAPN AVNGINPDRFRDPTTAWMGHDGEWRVIVGSSTDDRRGLAVLYKSRDFFNWTQATKPLHHEDLTGMWECPDFFPVSITGTD CLETSSFGEVKHVLKVSLIETLHDYYTIGSYDREKDVYVPDHGFVQDGSAPRLDYGKFYASKTFYDDVKKRRILWGWVNE SSPAKDDIEKGWSGLQSFPRKIWLGESGNELLQWPIEEIETLRETQVKWDNKVLKAGSTIQVHGVTAAQADVDVSFKVKD LEKADVIEPSWTDPQKICSEEDLSVKSGLGPFGLMVLTSNDMEEYTSVYFRIFKSNDTKYVVLMCSDQSRSSLNEENDKA TFGAFVAIDPSQETLSLRTLIDHSIVESYGGGGKVCITSRVYPKLAIGENTNLFVFNKGTQSVDVLGLNAWSLKSAQING ERVSPFSECEDSHSLNQY* |
| CDS seq | >BnaA06T0006300ZS ATGGGGAAAACACTGTTACTGCTGTCTTTGTTGCTCTGCAGCTTTATCATCGATCTTGAAGCTTCACGCCAAGATCTCAA CCAACCGTACCGGACCGGTTATCACTTTCAACCTCCCAGTAATTGGATGAACGATCCTAATGGACCAATGGTATACAAGG GAATATACCATCTTTTCTACCAGTACAACCCATACGGCGCCGTTTGGGATGTAAGAATCGTGTGGGGTCACTCCACGTCA CTTGATCTAGTTAACTGGACCCCACAGCCTCCAGCATTCAGTCCATCTCAGCCGTCAGACATCAACGGTTGTTGGTCAGG CTCCGTCACGATTCTACCAAACGGCACACCGGTGATCCTCTACACCGGCATTGACCAAAACAAAAGTCAAGTCCAAAACG TCGCCGTTCCGGTTAACATCTCCGATCCATATCTCCGAGAATGGTCGAAGTCGCCGGCAAATCCTCTGATGGCTCCTAAC GCCGTCAACGGAATCAACCCCGACCGGTTCCGAGATCCGACCACGGCGTGGATGGGACACGACGGAGAATGGAGAGTCAT CGTCGGAAGCTCGACGGACGATCGTCGAGGATTAGCGGTTCTTTACAAGAGCAGAGATTTCTTCAACTGGACGCAAGCGA CGAAGCCTCTTCACCACGAAGACTTAACCGGAATGTGGGAGTGTCCTGATTTTTTCCCGGTTTCGATAACCGGAACGGAC TGTCTCGAAACGTCGTCGTTTGGTGAGGTGAAACACGTGCTGAAAGTTAGTTTGATCGAGACGTTGCATGATTATTACAC GATTGGGAGTTACGACCGTGAGAAGGATGTTTACGTACCGGATCATGGGTTTGTGCAAGATGGTTCGGCTCCGAGGTTGG ACTACGGGAAGTTTTACGCGTCGAAAACGTTTTACGATGATGTTAAGAAACGAAGGATCTTGTGGGGTTGGGTTAACGAG TCTTCACCTGCTAAGGATGATATTGAGAAGGGTTGGTCTGGTCTTCAGTCATTTCCAAGAAAAATATGGCTTGGTGAATC GGGAAATGAGCTGCTACAATGGCCGATTGAAGAGATTGAGACCTTGCGTGAGACACAAGTCAAATGGGACAACAAGGTTC TTAAGGCAGGGTCTACTATCCAAGTTCATGGTGTTACTGCTGCACAGGCTGATGTTGATGTATCATTCAAAGTGAAAGAT TTGGAAAAAGCGGATGTGATTGAACCAAGTTGGACTGACCCTCAAAAGATATGTAGTGAGGAAGATTTATCGGTTAAGTC CGGTTTAGGGCCATTTGGTTTGATGGTGTTGACATCAAATGACATGGAGGAATACACATCAGTTTACTTCAGAATCTTCA AGTCAAATGATACTAAGTACGTAGTCTTGATGTGCAGTGACCAAAGCAGATCTTCGTTGAATGAAGAAAATGATAAAGCA ACGTTTGGTGCTTTTGTAGCAATAGACCCTTCTCAAGAAACACTTTCTCTTAGGACTTTGATTGACCACTCTATAGTGGA GAGTTATGGTGGAGGAGGCAAAGTATGTATAACTTCTCGAGTGTATCCAAAATTGGCAATAGGAGAAAATACAAATCTCT TTGTCTTCAACAAGGGAACTCAAAGTGTTGATGTCTTGGGCCTAAATGCTTGGAGCTTAAAGTCTGCCCAAATCAATGGC GAGAGAGTGTCACCTTTCAGCGAATGTGAAGATTCACACTCACTTAATCAGTATTGA |
Bn_scaffoldA06:544923-544931:- does not have available information here.