| Microexon ID | Bn_scaffoldA03:8851027-8851035:- |
| Species | Brassica Napus | Coordinates | scaffoldA03:8851027..8851035 |
| Microexon Cluster ID | MEP22 |
| Size | 9 |
| Phase | 1 |
| Pfam Domain Motif | Glyco_hydro_32N |
| Structure of Microexon-tag (flanking exon, microexon, flanking exon sizes) | 49,9,50 |
| Microexon location in the Microexon-tag | 2 |
| Microexon-tag DNA Seq | YSKYAMMGRACYGSYTWYCAYTTYCARCCYSMCAARAAYTGGATGAAYGATCCYAAYGGTCCAATGTWYTACAAGGGATKGTACCAYYTSTTCTAYCARTACAAYCCV |
| Logo of Microexon-tag DNA Seq |  |
| Alignment of exons |  |
| Microexon DNA seq | ATCCAAATG |
| Microexon Amino Acid seq | DPNG |
| Microexon-tag DNA Seq | CTTCACAGATCCGCTTTTCACTTTCAACCTCCAAAGCATTGGATTAACGATCCAAATGGTCCATTGTACTACAAAGGATTCTACCATCTCTTCTACCAATATAACACC |
| Microexon-tag Amino Acid Seq | LHRSAFHFQPPKHWINDPNGPLYYKGFYHLFYQYNT |
| Microexon-tag spanning region | 8850867-8851961 |
| Microexon-tag prediction score | 0.9533 |
| Overlapped with the annotated transcript (%) | 100 |
| New Transcript ID | BnaA03T0173500ZSx |
| Reference Transcript ID | BnaA03T0173500ZS |
| Gene ID | BnaA03G0173500ZS |
| Gene Name | NA |
| Transcript ID | BnaA03T0173500ZS |
| Protein ID | |
| Gene ID | BnaA03G0173500ZS |
| Gene Name | |
| Pfam domain motif | Glyco_hydro_32N |
| Motif E-value | 5.00E-101 |
| Motif start | 52 |
| Motif end | 371 |
| Protein seq | >BnaA03T0173500ZS MGVSSIVSVILLLVLINLCNNITGIDAFHQVYEKLQSQSVGSVNHLHRSAFHFQPPKHWINDPNGPLYYKGFYHLFYQYN TKGAVWGNIVWAHSVSKDLVNWEALEHAIYPSKWFDIKGTWSGSITIVPGKGPVILYTGINQNETQIQNYAIPEDPSDPY LRKWIKPDDNPVAVPDYTMNGSDFRDPTTAWFSKDGHWRTVVGSRRKHRGIGYIYRSKDFKHWVKAKHPIHSKESTGMWE CPDFFPVSTTDFENGLDLDYAGPNAKHVLKVSLDMTRYEYYTLGKYYPNKDRYVPNGESPDGWDGLRFDYGNFYASKTFF DYKKNRRILWGWANESDTVEDDISKGWAGLQVIPRTVLLDSTNKNQLVFWPIEEIESLRSSYVRMNNKDIKMGQRLEVKG ITPAQADVEVTFNVGSLEKAEPFDPSYTYKPLDLCRVKGSNVTGSVGPFGLITLATPDLEEYTPVFFRVFKGTSINKPKV LMCSDARPSSLKQDRGPLKQDRMYKPPFAGFVDVDLTDGRISLRSLIDHSVVESFGALGKTVITSRVYPIKAVKENAHLY VFNNGTQTVNVESLDAWSMERPLQMNNGAT* |
| CDS seq | >BnaA03T0173500ZS ATGGGTGTCTCAAGTATTGTTTCTGTGATATTATTGCTTGTACTAATCAATTTATGCAATAATATCACAGGAATTGACGC TTTTCATCAAGTTTATGAAAAATTGCAGTCTCAGTCAGTTGGGTCAGTGAATCATCTTCACAGATCCGCTTTTCACTTTC AACCTCCAAAGCATTGGATTAACGATCCAAATGGTCCATTGTACTACAAAGGATTCTACCATCTCTTCTACCAATATAAC ACCAAAGGTGCAGTTTGGGGTAATATTGTGTGGGCGCATTCGGTTTCCAAAGACTTGGTGAATTGGGAGGCTCTTGAACA TGCCATCTATCCCTCCAAATGGTTCGACATCAAAGGTACATGGTCCGGTTCAATAACAATCGTACCGGGAAAAGGACCGG TTATCCTCTATACCGGCATTAACCAAAACGAAACTCAAATCCAAAACTACGCAATCCCGGAGGATCCCTCAGACCCATAC CTAAGAAAATGGATTAAACCAGATGATAATCCGGTTGCAGTGCCAGATTATACCATGAATGGTTCAGACTTTCGTGACCC AACCACGGCCTGGTTTTCCAAAGACGGACATTGGAGAACCGTTGTGGGGTCAAGAAGAAAGCATAGAGGAATCGGATATA TCTACAGAAGCAAAGATTTTAAGCATTGGGTCAAAGCTAAGCACCCTATCCACTCCAAAGAATCCACCGGTATGTGGGAA TGTCCTGACTTCTTCCCGGTTTCCACAACCGATTTTGAGAACGGTTTGGACTTAGATTACGCCGGTCCAAACGCTAAGCA CGTGTTGAAAGTTAGCTTGGACATGACACGGTACGAGTATTACACGCTTGGCAAATACTATCCTAACAAGGACCGTTATG TACCAAACGGTGAATCGCCAGATGGTTGGGACGGTTTAAGATTTGATTACGGTAACTTCTATGCCTCCAAGACATTCTTT GACTACAAAAAGAACAGAAGAATCTTGTGGGGTTGGGCTAATGAATCTGACACCGTTGAAGATGATATATCCAAGGGCTG GGCTGGTCTTCAGGTAATTCCAAGAACGGTGCTTCTTGACTCAACAAACAAGAATCAACTAGTGTTTTGGCCTATTGAAG AAATAGAGTCATTAAGAAGTAGTTATGTCCGAATGAACAACAAAGACATCAAGATGGGTCAACGCTTAGAAGTCAAAGGA ATCACTCCTGCCCAGGCCGATGTGGAAGTGACATTCAACGTTGGAAGTCTAGAGAAAGCTGAGCCATTCGACCCGAGCTA CACATACAAGCCGTTAGATTTGTGTAGAGTGAAAGGCTCGAACGTGACAGGTAGTGTTGGACCGTTTGGTCTGATCACAT TAGCCACTCCTGATCTGGAAGAGTACACTCCTGTCTTCTTTAGAGTCTTCAAAGGCACTTCCATAAATAAGCCTAAGGTC CTCATGTGCTCCGATGCTAGACCTTCGTCCTTAAAGCAAGACAGGGGTCCACTCAAACAAGATAGGATGTATAAGCCACC ATTTGCTGGTTTTGTGGATGTTGACCTAACTGATGGAAGGATCTCTCTAAGGAGTTTGATTGACCATTCGGTAGTAGAGA GCTTTGGAGCGTTAGGGAAGACAGTGATAACGTCAAGAGTGTATCCGATAAAAGCAGTGAAAGAGAATGCACATTTGTAT GTGTTTAATAATGGAACACAAACTGTGAACGTAGAGAGTCTTGATGCTTGGAGCATGGAGAGGCCTTTGCAGATGAATAA TGGAGCTACTTAA |
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