
Microexon ID | At_5:3839851-3839859:+ |
Species | Arabidopsis thaliana | Coordinates | 5:3839851..3839859 |
Microexon Cluster ID | MEP22 |
Size | 9 |
Phase | 1 |
Pfam Domain Motif | Glyco_hydro_32N |
Structure of Microexon-tag (flanking exon, microexon, flanking exon sizes) | 49,9,50 |
Microexon location in the Microexon-tag | 2 |
Microexon-tag DNA Seq | YSKYAMMGRACYGSYTWYCAYTTYCARCCYSMCAARAAYTGGATGAAYGATCCYAAYGGTCCAATGTWYTACAAGGGATKGTACCAYYTSTTCTAYCARTACAAYCCV |
Logo of Microexon-tag DNA Seq | ![]() |
Alignment of exons | ![]() |
Microexon DNA seq | ATCCAAACG |
Microexon Amino Acid seq | DPNA |
Microexon-tag DNA Seq | CTTAACCGGACGTCCTTCCATTTCCAACCTCAGAGAAATTGGCTCAACGATCCAAACGCGCCAATGTATTACAAAGGATTCTACCATTTGTTCTACCAGAATAACCCT |
Microexon-tag Amino Acid Seq | LNRTSFHFQPQRNWLNDPNAPMYYKGFYHLFYQNNP |
Microexon-tag spanning region | 3839532-3840004 |
Microexon-tag prediction score | 0.938 |
Overlapped with the annotated transcript (%) | 100 |
New Transcript ID | AT5G11920.1x |
Reference Transcript ID | AT5G11920.1 |
Gene ID | AT5G11920 |
Gene Name | CWINV6 |
Transcript ID | AT5G11920.1 |
Protein ID | AT5G11920.1 |
Gene ID | AT5G11920 |
Gene Name | CWINV6 |
Pfam domain motif | Glyco_hydro_32N |
Motif E-value | 4.4e-98 |
Motif start | 21 |
Motif end | 341 |
Protein seq | >AT5G11920.1 MADVMEQNLLQTAVLNRTSFHFQPQRNWLNDPNAPMYYKGFYHLFYQNNPLAPEFSRTRIIWGHSVSQDMVNWIQLEPAL VPSESFDINSCWSGSATILPDGRPVILYTGLDVNNKQQVTVVAEPKDVSDPLLREWVKPKYNPVMVPPSNVPFNCFRDPT EAWKGQDGKWRVLIGAKEKDTEKGMAILYRSDDFVQWTKYPVPLLESEGTGMWECPDFFPVSITGKEGVDTSVNNASVRH VLKASFGGNDCYVIGKYSSETEDFSADYEFTNTSADLRYDHGTFYASKAFFDSVKNRRINWGWVIETDSKEDDFKKGWAG LMTLPREIWMDTSGKKLMQWPIEEINNLRTKSVSLDDCYEFKTGSTFEISGITAAQADVEVTFNLPFLENNPEILDADQV DDATLFDRDSSVGCVYGPFGLLALASSDLSEQTAIFFKVIRRGNGYAVVMCSSEKRSSLRDNIKKSSHGAFLDIDPRHEK ISLRCLIDHSIIESYGVGGKTVITSRVYPKLAIGEAAKLYVFNDGENGVIMTSLEAWSMRNAQINSNPTY* |
CDS seq | >AT5G11920.1 ATGGCTGATGTAATGGAACAGAATCTTCTTCAAACCGCTGTGCTTAACCGGACGTCCTTCCATTTCCAACCTCAGAGAAA TTGGCTCAACGATCCAAACGCGCCAATGTATTACAAAGGATTCTACCATTTGTTCTACCAGAATAACCCTTTGGCTCCCG AATTCAGTAGGACAAGAATCATATGGGGACACTCTGTTTCACAAGACATGGTCAATTGGATCCAGCTCGAACCAGCCCTT GTCCCTTCTGAGTCCTTTGACATCAACAGCTGCTGGTCAGGATCCGCCACGATCCTCCCTGATGGCAGACCTGTAATTTT GTACACTGGACTCGACGTCAACAACAAACAGCAAGTCACAGTTGTTGCCGAACCAAAGGACGTTTCTGACCCTTTGCTTC GTGAGTGGGTTAAGCCAAAGTACAATCCTGTGATGGTTCCGCCAAGTAATGTCCCTTTTAATTGTTTCCGTGATCCCACG GAGGCGTGGAAAGGGCAAGATGGGAAATGGAGAGTGCTCATAGGAGCTAAGGAGAAAGATACTGAGAAAGGAATGGCGAT TTTGTACCGAAGCGATGATTTTGTCCAGTGGACAAAGTATCCGGTGCCTTTACTTGAGTCAGAAGGAACCGGAATGTGGG AATGCCCTGATTTTTTCCCGGTTTCTATCACTGGTAAAGAAGGTGTTGACACTTCGGTAAACAATGCTAGTGTGAGGCAT GTCTTGAAGGCGAGTTTTGGAGGCAATGATTGCTATGTCATTGGTAAATACTCTTCTGAGACTGAAGACTTTTCAGCGGA TTATGAGTTCACTAACACTAGTGCAGATTTGAGATATGATCATGGAACGTTTTATGCCTCAAAGGCGTTCTTCGATAGTG TTAAAAATAGGAGGATCAACTGGGGATGGGTCATAGAGACTGATAGCAAAGAAGATGATTTTAAGAAAGGATGGGCTGGC CTTATGACTCTTCCCAGGGAAATTTGGATGGACACAAGTGGAAAGAAGCTGATGCAATGGCCAATTGAAGAAATCAACAA TCTCCGGACCAAAAGTGTTAGCCTTGATGATTGCTATGAATTCAAAACCGGCTCTACCTTTGAAATCTCAGGCATCACTG CTGCCCAAGCAGATGTAGAAGTGACTTTTAATCTGCCTTTCCTGGAAAATAATCCCGAGATACTTGATGCTGACCAAGTT GATGATGCGACTCTGTTTGATCGTGATAGCTCGGTTGGATGTGTTTACGGGCCTTTTGGATTGCTAGCATTGGCTTCCAG TGATTTATCAGAACAAACCGCAATCTTCTTTAAAGTTATTCGTCGCGGTAACGGATATGCAGTTGTAATGTGCAGCAGCG AGAAGAGGTCTTCGTTGAGAGACAACATAAAAAAATCTTCGCATGGAGCATTCCTAGATATTGATCCAAGGCATGAGAAG ATCTCATTAAGATGTTTGATCGATCACTCGATTATAGAGAGCTACGGAGTAGGAGGAAAAACTGTGATAACATCTAGAGT TTATCCAAAATTGGCAATTGGTGAAGCCGCTAAGCTTTATGTCTTCAATGATGGAGAAAATGGTGTGATCATGACGTCCC TGGAAGCTTGGAGCATGAGAAATGCCCAAATCAATTCAAACCCAACTTATTAG |
Microexon DNA seq | ATCCAAACG |
Microexon Amino Acid seq | DPNA |
Microexon-tag DNA Seq | CTTAACCGGACGTCCTTCCATTTCCAACCTCAGAGAAATTGGCTCAACGATCCAAACGCGCCAATGTATTACAAAGGATTCTACCATTTGTTCTACCAGAATAACCCT |
Microexon-tag Amino Acid seq | LNRTSFHFQPQRNWLNDPNAPMYYKGFYHLFYQNNP |
Transcript ID | AT5G11920.1 |
Gene ID | At.22805 |
Gene Name | CWINV6 |
Pfam domain motif | Glyco_hydro_32N |
Motif E-value | 4.4e-98 |
Motif start | 21 |
Motif end | 341 |
Protein seq | >AT5G11920.1 MADVMEQNLLQTAVLNRTSFHFQPQRNWLNDPNAPMYYKGFYHLFYQNNPLAPEFSRTRIIWGHSVSQDMVNWIQLEPAL VPSESFDINSCWSGSATILPDGRPVILYTGLDVNNKQQVTVVAEPKDVSDPLLREWVKPKYNPVMVPPSNVPFNCFRDPT EAWKGQDGKWRVLIGAKEKDTEKGMAILYRSDDFVQWTKYPVPLLESEGTGMWECPDFFPVSITGKEGVDTSVNNASVRH VLKASFGGNDCYVIGKYSSETEDFSADYEFTNTSADLRYDHGTFYASKAFFDSVKNRRINWGWVIETDSKEDDFKKGWAG LMTLPREIWMDTSGKKLMQWPIEEINNLRTKSVSLDDCYEFKTGSTFEISGITAAQADVEVTFNLPFLENNPEILDADQV DDATLFDRDSSVGCVYGPFGLLALASSDLSEQTAIFFKVIRRGNGYAVVMCSSEKRSSLRDNIKKSSHGAFLDIDPRHEK ISLRCLIDHSIIESYGVGGKTVITSRVYPKLAIGEAAKLYVFNDGENGVIMTSLEAWSMRNAQINSNPTY* |
CDS seq | >AT5G11920.1 ATGGCTGATGTAATGGAACAGAATCTTCTTCAAACCGCTGTGCTTAACCGGACGTCCTTCCATTTCCAACCTCAGAGAAA TTGGCTCAACGATCCAAACGCGCCAATGTATTACAAAGGATTCTACCATTTGTTCTACCAGAATAACCCTTTGGCTCCCG AATTCAGTAGGACAAGAATCATATGGGGACACTCTGTTTCACAAGACATGGTCAATTGGATCCAGCTCGAACCAGCCCTT GTCCCTTCTGAGTCCTTTGACATCAACAGCTGCTGGTCAGGATCCGCCACGATCCTCCCTGATGGCAGACCTGTAATTTT GTACACTGGACTCGACGTCAACAACAAACAGCAAGTCACAGTTGTTGCCGAACCAAAGGACGTTTCTGACCCTTTGCTTC GTGAGTGGGTTAAGCCAAAGTACAATCCTGTGATGGTTCCGCCAAGTAATGTCCCTTTTAATTGTTTCCGTGATCCCACG GAGGCGTGGAAAGGGCAAGATGGGAAATGGAGAGTGCTCATAGGAGCTAAGGAGAAAGATACTGAGAAAGGAATGGCGAT TTTGTACCGAAGCGATGATTTTGTCCAGTGGACAAAGTATCCGGTGCCTTTACTTGAGTCAGAAGGAACCGGAATGTGGG AATGCCCTGATTTTTTCCCGGTTTCTATCACTGGTAAAGAAGGTGTTGACACTTCGGTAAACAATGCTAGTGTGAGGCAT GTCTTGAAGGCGAGTTTTGGAGGCAATGATTGCTATGTCATTGGTAAATACTCTTCTGAGACTGAAGACTTTTCAGCGGA TTATGAGTTCACTAACACTAGTGCAGATTTGAGATATGATCATGGAACGTTTTATGCCTCAAAGGCGTTCTTCGATAGTG TTAAAAATAGGAGGATCAACTGGGGATGGGTCATAGAGACTGATAGCAAAGAAGATGATTTTAAGAAAGGATGGGCTGGC CTTATGACTCTTCCCAGGGAAATTTGGATGGACACAAGTGGAAAGAAGCTGATGCAATGGCCAATTGAAGAAATCAACAA TCTCCGGACCAAAAGTGTTAGCCTTGATGATTGCTATGAATTCAAAACCGGCTCTACCTTTGAAATCTCAGGCATCACTG CTGCCCAAGCAGATGTAGAAGTGACTTTTAATCTGCCTTTCCTGGAAAATAATCCCGAGATACTTGATGCTGACCAAGTT GATGATGCGACTCTGTTTGATCGTGATAGCTCGGTTGGATGTGTTTACGGGCCTTTTGGATTGCTAGCATTGGCTTCCAG TGATTTATCAGAACAAACCGCAATCTTCTTTAAAGTTATTCGTCGCGGTAACGGATATGCAGTTGTAATGTGCAGCAGCG AGAAGAGGTCTTCGTTGAGAGACAACATAAAAAAATCTTCGCATGGAGCATTCCTAGATATTGATCCAAGGCATGAGAAG ATCTCATTAAGATGTTTGATCGATCACTCGATTATAGAGAGCTACGGAGTAGGAGGAAAAACTGTGATAACATCTAGAGT TTATCCAAAATTGGCAATTGGTGAAGCCGCTAAGCTTTATGTCTTCAATGATGGAGAAAATGGTGTGATCATGACGTCCC TGGAAGCTTGGAGCATGAGAAATGCCCAAATCAATTCAAACCCAACTTATTAG |