Microexon ID At_3:4530347-4530355:-
Species Arabidopsis thaliana
Coordinates 3:4530347..4530355
Microexon Cluster ID MEP22
Size 9
Phase 1
Pfam Domain Motif Glyco_hydro_32N
Structure of Microexon-tag (flanking exon, microexon, flanking exon sizes) 49,9,50
Microexon location in the Microexon-tag 2
Microexon-tag DNA Seq YSKYAMMGRACYGSYTWYCAYTTYCARCCYSMCAARAAYTGGATGAAYGATCCYAAYGGTCCAATGTWYTACAAGGGATKGTACCAYYTSTTCTAYCARTACAAYCCV
Logo of Microexon-tag DNA Seq NT60 Logo
Alignment of exons MSA
Microexon DNA seq ATCCTAACG
Microexon Amino Acid seq DPNG
Microexon-tag DNA Seq CCTTACCGAACCGGTTATCATTTCCAGCCTCCCAAAAATTGGATGAACGATCCTAACGGGCCTATGATATACAAAGGAATCTATCATCTATTCTATCAATGGAACCAA
Microexon-tag Amino Acid Seq PYRTGYHFQPPKNWMNDPNGPMIYKGIYHLFYQWNQ
Microexon-tag spanning region4530194-4530549
Microexon-tag prediction score0.937
Overlapped with the annotated transcript (%) 100
New Transcript ID AT3G13784.2x
Reference Transcript ID AT3G13784.2
Gene ID AT3G13784
Gene Name CWINV5
Transcript ID AT3G13784.2
Protein ID AT3G13784.2
Gene ID AT3G13784
Gene Name CWINV5
Pfam domain motif Glyco_hydro_32N
Motif E-value 3e-104
Motif start 47
Motif end 369
Protein seq >AT3G13784.2
MANIVWCNIAMFLLVSLFLTDDAVVVLDALDNVPNNIKNQPYRTGYHFQPPKNWMNDPNGPMIYKGIYHLFYQWNQNGAV
MDVNKTVWGHATSTDLINWITLSPAIRPSRPSDINGCWSGSVTILPNGKPVILYTGNDRYNRQVQNLVKPKNLTDPYLRH
WTKSPENPLVTPSPVNHINSSAFRDPTTAWFGRDGRWRITTGSQEGRRGLAILHTSKDFVIWKQSPKPLHYHDGTGMWEC
PDFFPVARTDSRGLDTSFSSGPMVKHVLKVSLTDTFNDYYTIGTYDEVRDVYVPDKGFVQDETAPRYDYGKFYASKTFYD
SVNQRRILWGWVNESSPEKDNIKKGWAGLQAIPRKVWLDESGKRLVQWPVKEIERLRTTQVKWGNKLLKGGSVMEVHGVT
APQADVEVFFKVSGFDLEKADVIEPGWTDPQLICSQRNASSGLGPFGLMVLASKNMEEYTSVNIRIFRAGENSKEHVVVM
CSDQSTSSLEKGNDKTTYGAFLDISPYQPISLRTLIDKSIVESFGGKGKTCITSRVYPKLAIGERTHLFAFNKGSQNVNV
LSLSAWSMKSSL*
CDS seq >AT3G13784.2
ATGGCTAATATAGTTTGGTGTAACATTGCCATGTTCTTGTTGGTCTCGTTGTTTCTCACTGACGATGCTGTTGTTGTTCT
TGATGCCTTGGACAACGTTCCCAATAATATCAAGAACCAACCTTACCGAACCGGTTATCATTTCCAGCCTCCCAAAAATT
GGATGAACGATCCTAACGGGCCTATGATATACAAAGGAATCTATCATCTATTCTATCAATGGAACCAAAACGGCGCCGTC
ATGGACGTTAACAAAACCGTATGGGGCCATGCAACATCAACGGATCTAATCAACTGGATCACACTTTCTCCAGCAATCAG
ACCATCTCGACCGTCCGATATTAACGGATGCTGGTCCGGCTCCGTCACGATTCTCCCTAATGGCAAACCTGTAATTCTTT
ACACCGGCAACGACCGTTATAACCGCCAGGTCCAAAACTTAGTTAAACCTAAAAACCTCACCGATCCATATCTACGGCAC
TGGACCAAATCGCCGGAAAATCCCCTCGTGACACCTAGCCCCGTCAACCACATCAACTCCAGCGCGTTTCGTGATCCAAC
CACCGCGTGGTTTGGCCGTGACGGGCGTTGGCGCATAACCACCGGAAGCCAAGAAGGTCGACGTGGATTAGCGATTCTAC
ACACGAGCAAAGATTTCGTAATATGGAAGCAATCTCCAAAGCCTCTTCATTACCACGACGGTACCGGAATGTGGGAGTGC
CCTGATTTTTTCCCGGTGGCTAGAACTGATTCACGGGGCCTAGATACGTCTTTTTCAAGTGGGCCGATGGTTAAACACGT
CCTTAAAGTGAGCTTAACAGATACGTTTAATGATTACTACACGATTGGTACGTACGATGAAGTGAGAGATGTCTACGTAC
CGGACAAGGGTTTTGTTCAGGACGAAACGGCTCCGAGATATGATTACGGCAAATTTTATGCGTCGAAAACATTTTACGAC
TCTGTTAATCAGCGCAGGATTTTGTGGGGTTGGGTTAACGAGTCGTCACCGGAGAAAGATAACATCAAGAAGGGTTGGGC
CGGTTTACAGGCTATTCCTAGGAAAGTATGGCTTGATGAATCAGGAAAGAGATTGGTGCAATGGCCGGTTAAGGAAATAG
AGAGGTTACGTACAACGCAAGTCAAGTGGGGAAACAAACTATTGAAAGGAGGGTCGGTAATGGAGGTTCATGGAGTCACA
GCTCCACAAGCAGATGTGGAAGTTTTCTTCAAAGTGAGTGGTTTTGACTTAGAGAAAGCAGATGTGATTGAACCGGGCTG
GACCGATCCGCAATTGATCTGCAGTCAGAGGAATGCGTCATCAGGTTTAGGTCCATTCGGTTTAATGGTTCTAGCTTCCA
AGAACATGGAAGAGTATACATCGGTCAATATCAGAATCTTCAGAGCTGGTGAGAATAGTAAGGAGCACGTAGTGGTCATG
TGCAGTGACCAAAGCACATCAAGTTTAGAGAAAGGGAATGATAAAACAACTTATGGTGCTTTTTTAGATATCTCTCCTTA
TCAACCAATCTCTCTCAGGACTTTGATTGATAAATCAATAGTGGAGAGCTTTGGTGGGAAAGGGAAAACATGTATTACCT
CGAGAGTTTATCCAAAATTGGCAATAGGAGAAAGAACACATCTCTTTGCTTTTAACAAGGGATCTCAAAATGTTAATGTT
TTAAGCCTAAGTGCTTGGAGCATGAAGTCTTCTCTTTAA
At_3:4530347-4530355:- does not have available information here.