
Microexon ID | At_1:20566930-20566938:+ |
Species | Arabidopsis thaliana | Coordinates | 1:20566930..20566938 |
Microexon Cluster ID | MEP22 |
Size | 9 |
Phase | 1 |
Pfam Domain Motif | Glyco_hydro_32N |
Structure of Microexon-tag (flanking exon, microexon, flanking exon sizes) | 49,9,50 |
Microexon location in the Microexon-tag | 2 |
Microexon-tag DNA Seq | YSKYAMMGRACYGSYTWYCAYTTYCARCCYSMCAARAAYTGGATGAAYGATCCYAAYGGTCCAATGTWYTACAAGGGATKGTACCAYYTSTTCTAYCARTACAAYCCV |
Logo of Microexon-tag DNA Seq | ![]() |
Alignment of exons | ![]() |
Microexon DNA seq | ATCCTAATG |
Microexon Amino Acid seq | DPNG |
Microexon-tag DNA Seq | CCGTACCGGACCGGTTATCACTTTCAACCTCTCAAAAATTGGATGAACGATCCTAATGGACCAATGATATACAAAGGAATATACCATCTTTTTTACCAATATAACCCA |
Microexon-tag Amino Acid Seq | PYRTGYHFQPLKNWMNDPNGPMIYKGIYHLFYQYNP |
Microexon-tag spanning region | 20566725-20567081 |
Microexon-tag prediction score | 0.9487 |
Overlapped with the annotated transcript (%) | 100 |
New Transcript ID | AT1G55120.1x |
Reference Transcript ID | AT1G55120.1 |
Gene ID | AT1G55120 |
Gene Name | CWINV3 |
Transcript ID | AT1G55120.1 |
Protein ID | AT1G55120.1 |
Gene ID | AT1G55120 |
Gene Name | CWINV3 |
Pfam domain motif | Glyco_hydro_32N |
Motif E-value | 8.2e-107 |
Motif start | 43 |
Motif end | 365 |
Protein seq | >AT1G55120.1 MAKLNRSNIGLSLLLSMFLANFITDLEASSHQDLNQPYRTGYHFQPLKNWMNDPNGPMIYKGIYHLFYQYNPYGAVWDVR IVWGHSTSVDLVNWISQPPAFNPSQPSDINGCWSGSVTILPNGKPVILYTGIDQNKGQVQNVAVPVNISDPYLREWSKPP QNPLMTTNAVNGINPDRFRDPTTAWLGRDGEWRVIVGSSTDDRRGLAILYKSRDFFNWTQSMKPLHYEDLTGMWECPDFF PVSITGSDGVETSSVGENGIKHVLKVSLIETLHDYYTIGSYDREKDVYVPDLGFVQNESAPRLDYGKYYASKTFYDDVKK RRILWGWVNESSPAKDDIEKGWSGLQSFPRKIWLDESGKELLQWPIEEIETLRGQQVNWQKKVLKAGSTLQVHGVTAAQA DVEVSFKVKELEKADVIEPSWTDPQKICSQGDLSVMSGLGPFGLMVLASNDMEEYTSVYFRIFKSNDDTNKKTKYVVLMC SDQSRSSLNDENDKSTFGAFVAIDPSHQTISLRTLIDHSIVESYGGGGRTCITSRVYPKLAIGENANLFVFNKGTQSVDI LTLSAWSLKSAQINGDLMSPFIEREESRSPNHQF* |
CDS seq | >AT1G55120.1 ATGGCGAAATTAAATCGTTCCAACATTGGTCTCTCACTGTTACTATCTATGTTCCTCGCAAACTTTATCACCGATCTTGA AGCTTCTTCTCATCAAGATCTCAACCAACCGTACCGGACCGGTTATCACTTTCAACCTCTCAAAAATTGGATGAACGATC CTAATGGACCAATGATATACAAAGGAATATACCATCTTTTTTACCAATATAACCCATACGGTGCCGTTTGGGATGTGAGA ATCGTGTGGGGACACTCCACGTCAGTTGACTTAGTCAACTGGATTTCACAACCTCCAGCTTTTAATCCATCTCAGCCGTC AGATATCAACGGTTGTTGGTCAGGCTCCGTCACGATTCTACCAAACGGCAAACCTGTGATCCTCTACACCGGCATTGACC AAAACAAAGGTCAAGTCCAAAACGTCGCCGTTCCGGTTAACATCTCTGATCCTTATCTCCGAGAATGGTCAAAACCGCCG CAAAATCCTCTAATGACAACTAACGCGGTTAACGGAATTAACCCGGACCGGTTTCGTGATCCGACCACCGCGTGGCTTGG ACGTGACGGAGAATGGCGAGTAATCGTCGGAAGCTCGACGGACGATCGACGAGGATTAGCGATTCTTTACAAAAGCAGAG ATTTCTTCAACTGGACGCAATCAATGAAGCCTTTACATTACGAAGACTTAACCGGAATGTGGGAATGTCCTGATTTTTTC CCGGTTTCGATAACCGGATCGGACGGTGTAGAAACGTCGTCGGTTGGTGAGAATGGGATTAAGCATGTGCTTAAAGTGAG TTTGATTGAGACATTGCATGATTATTACACGATTGGGAGTTATGATCGTGAGAAAGATGTTTACGTACCGGATCTTGGGT TTGTGCAAAACGAATCAGCTCCGAGGTTAGATTACGGGAAATATTACGCGTCGAAAACGTTTTACGATGATGTTAAAAAA CGAAGGATCTTGTGGGGTTGGGTTAATGAATCGTCTCCAGCTAAAGATGATATTGAGAAGGGTTGGTCTGGTCTTCAGTC ATTTCCGAGGAAAATATGGCTCGATGAATCAGGAAAGGAATTGCTACAGTGGCCGATTGAAGAGATTGAGACATTGCGTG GGCAACAAGTCAACTGGCAAAAGAAAGTTCTCAAAGCAGGATCTACTCTCCAAGTTCATGGTGTCACTGCTGCGCAGGCA GATGTTGAGGTATCGTTCAAGGTGAAGGAATTGGAAAAGGCGGATGTGATTGAACCGAGTTGGACCGATCCACAAAAGAT ATGTAGTCAGGGAGATTTATCGGTTATGTCGGGTTTAGGACCATTTGGTTTGATGGTTTTGGCATCCAATGACATGGAAG AGTACACGTCCGTTTACTTCAGAATTTTCAAGTCAAATGACGATACTAACAAGAAGACTAAATACGTGGTGTTGATGTGC AGTGACCAAAGCAGATCATCGTTAAATGATGAAAATGATAAATCAACCTTTGGTGCTTTTGTTGCGATAGACCCTTCTCA CCAAACAATTTCTCTTAGGACTTTGATTGATCACTCGATAGTGGAGAGTTATGGTGGAGGAGGCAGAACATGTATAACCT CAAGAGTGTATCCAAAATTGGCAATCGGAGAAAATGCAAATCTGTTTGTCTTCAACAAAGGCACTCAAAGTGTTGATATC TTGACCCTAAGTGCTTGGAGTTTAAAGTCTGCTCAAATCAATGGCGACTTAATGTCACCATTTATTGAGCGTGAAGAGTC ACGCTCACCTAATCATCAGTTTTGA |
Microexon DNA seq | ATCCTAATG |
Microexon Amino Acid seq | DPNG |
Microexon-tag DNA Seq | CCGTACCGGACCGGTTATCACTTTCAACCTCTCAAAAATTGGATGAACGATCCTAATGGACCAATGATATACAAAGGAATATACCATCTTTTTTACCAATATAACCCA |
Microexon-tag Amino Acid seq | PYRTGYHFQPLKNWMNDPNGPMIYKGIYHLFYQYNP |
Transcript ID | AT1G55120.1 |
Gene ID | At.4749 |
Gene Name | CWINV3 |
Pfam domain motif | Glyco_hydro_32N |
Motif E-value | 8.2e-107 |
Motif start | 43 |
Motif end | 365 |
Protein seq | >AT1G55120.1 MAKLNRSNIGLSLLLSMFLANFITDLEASSHQDLNQPYRTGYHFQPLKNWMNDPNGPMIYKGIYHLFYQYNPYGAVWDVR IVWGHSTSVDLVNWISQPPAFNPSQPSDINGCWSGSVTILPNGKPVILYTGIDQNKGQVQNVAVPVNISDPYLREWSKPP QNPLMTTNAVNGINPDRFRDPTTAWLGRDGEWRVIVGSSTDDRRGLAILYKSRDFFNWTQSMKPLHYEDLTGMWECPDFF PVSITGSDGVETSSVGENGIKHVLKVSLIETLHDYYTIGSYDREKDVYVPDLGFVQNESAPRLDYGKYYASKTFYDDVKK RRILWGWVNESSPAKDDIEKGWSGLQSFPRKIWLDESGKELLQWPIEEIETLRGQQVNWQKKVLKAGSTLQVHGVTAAQA DVEVSFKVKELEKADVIEPSWTDPQKICSQGDLSVMSGLGPFGLMVLASNDMEEYTSVYFRIFKSNDDTNKKTKYVVLMC SDQSRSSLNDENDKSTFGAFVAIDPSHQTISLRTLIDHSIVESYGGGGRTCITSRVYPKLAIGENANLFVFNKGTQSVDI LTLSAWSLKSAQINGDLMSPFIEREESRSPNHQF* |
CDS seq | >AT1G55120.1 ATGGCGAAATTAAATCGTTCCAACATTGGTCTCTCACTGTTACTATCTATGTTCCTCGCAAACTTTATCACCGATCTTGA AGCTTCTTCTCATCAAGATCTCAACCAACCGTACCGGACCGGTTATCACTTTCAACCTCTCAAAAATTGGATGAACGATC CTAATGGACCAATGATATACAAAGGAATATACCATCTTTTTTACCAATATAACCCATACGGTGCCGTTTGGGATGTGAGA ATCGTGTGGGGACACTCCACGTCAGTTGACTTAGTCAACTGGATTTCACAACCTCCAGCTTTTAATCCATCTCAGCCGTC AGATATCAACGGTTGTTGGTCAGGCTCCGTCACGATTCTACCAAACGGCAAACCTGTGATCCTCTACACCGGCATTGACC AAAACAAAGGTCAAGTCCAAAACGTCGCCGTTCCGGTTAACATCTCTGATCCTTATCTCCGAGAATGGTCAAAACCGCCG CAAAATCCTCTAATGACAACTAACGCGGTTAACGGAATTAACCCGGACCGGTTTCGTGATCCGACCACCGCGTGGCTTGG ACGTGACGGAGAATGGCGAGTAATCGTCGGAAGCTCGACGGACGATCGACGAGGATTAGCGATTCTTTACAAAAGCAGAG ATTTCTTCAACTGGACGCAATCAATGAAGCCTTTACATTACGAAGACTTAACCGGAATGTGGGAATGTCCTGATTTTTTC CCGGTTTCGATAACCGGATCGGACGGTGTAGAAACGTCGTCGGTTGGTGAGAATGGGATTAAGCATGTGCTTAAAGTGAG TTTGATTGAGACATTGCATGATTATTACACGATTGGGAGTTATGATCGTGAGAAAGATGTTTACGTACCGGATCTTGGGT TTGTGCAAAACGAATCAGCTCCGAGGTTAGATTACGGGAAATATTACGCGTCGAAAACGTTTTACGATGATGTTAAAAAA CGAAGGATCTTGTGGGGTTGGGTTAATGAATCGTCTCCAGCTAAAGATGATATTGAGAAGGGTTGGTCTGGTCTTCAGTC ATTTCCGAGGAAAATATGGCTCGATGAATCAGGAAAGGAATTGCTACAGTGGCCGATTGAAGAGATTGAGACATTGCGTG GGCAACAAGTCAACTGGCAAAAGAAAGTTCTCAAAGCAGGATCTACTCTCCAAGTTCATGGTGTCACTGCTGCGCAGGCA GATGTTGAGGTATCGTTCAAGGTGAAGGAATTGGAAAAGGCGGATGTGATTGAACCGAGTTGGACCGATCCACAAAAGAT ATGTAGTCAGGGAGATTTATCGGTTATGTCGGGTTTAGGACCATTTGGTTTGATGGTTTTGGCATCCAATGACATGGAAG AGTACACGTCCGTTTACTTCAGAATTTTCAAGTCAAATGACGATACTAACAAGAAGACTAAATACGTGGTGTTGATGTGC AGTGACCAAAGCAGATCATCGTTAAATGATGAAAATGATAAATCAACCTTTGGTGCTTTTGTTGCGATAGACCCTTCTCA CCAAACAATTTCTCTTAGGACTTTGATTGATCACTCGATAGTGGAGAGTTATGGTGGAGGAGGCAGAACATGTATAACCT CAAGAGTGTATCCAAAATTGGCAATCGGAGAAAATGCAAATCTGTTTGTCTTCAACAAAGGCACTCAAAGTGTTGATATC TTGACCCTAAGTGCTTGGAGTTTAAAGTCTGCTCAAATCAATGGCGACTTAATGTCACCATTTATTGAGCGTGAAGAGTC ACGCTCACCTAATCATCAGTTTTGA |