| Microexon ID | Zm_9:110230847-110230855:- |
| Species | Zea mays | Coordinates | 9:110230847..110230855 |
| Microexon Cluster ID | MEP21 |
| Size | 9 |
| Phase | 1 |
| Pfam Domain Motif | AP2 |
| Structure of Microexon-tag (flanking exon, microexon, flanking exon sizes) | 49,9,50 |
| Microexon location in the Microexon-tag | 2 |
| Microexon-tag DNA Seq | TGGGAYAAYAGYWSYWGRARWGARRGYCARAVYARGAARGGAARRCAAGTTTAYYTRGGKGSWTATGAYRAKGARGARRMWGCWGCWMGRGCWTATGAYYTDGCWGCW |
| Logo of Microexon-tag DNA Seq |  |
| Alignment of exons |  |
| Microexon DNA seq | TCTACCTAG |
| Microexon Amino Acid seq | VYLG |
| Microexon-tag DNA Seq | TGGGACAACAGCTGCCGCCGGGAGGGCCAAAGCCGCAAAGGACGGCAAGTCTACCTAGGAGGCTATGACAAGGAGGAGAAGGCGGCTAGAGCTTACGACCTCGCCGCG |
| Microexon-tag Amino Acid Seq | WDNSCRREGQSRKGRQVYLGGYDKEEKAARAYDLAA |
| Microexon-tag spanning region | 110230639-110231033 |
| Microexon-tag prediction score | 0.9482 |
| Overlapped with the annotated transcript (%) | 91.67 |
| New Transcript ID | Zm00001d046913_T001x |
| Reference Transcript ID | Zm00001d046913_T001 |
| Gene ID | Zm00001d046913 |
| Gene Name | heat shock complementing factor1 |
Zm_9:110230847-110230855:- does not have available information here.
| Microexon DNA seq | TCTACCTAG |
| Microexon Amino Acid seq | VYLG |
| Microexon-tag DNA Seq | TGGGACAACAGCTGCCGCCGGGAGGGCCAAAGCCGCAAAGGACGGCAAGTCTACCTAGGAGGCTATGACAAGGAGGAGAAGGCGGCTAGAGCTTACGACCTCGCCGCG |
| Microexon-tag Amino Acid seq | WDNSCRREGQSRKGRQVYLGGYDKEEKAARAYDLAA |
| Transcript ID | Zm.37553.1 |
| Gene ID | Zm.37553 |
| Gene Name | heat shock complementing factor1 |
| Pfam domain motif | AP2 |
| Motif E-value | 3.6e-13 |
| Motif start | 140 |
| Motif end | 198 |
| Protein seq | >Zm.37553.1 MDMDMSSAYPHHWLSFSLSNNYHHGLLEAFSNSSGTPLGDEQGAVEESPRTVEDFLGGVGGAGAPPQPAAAADQDHQLVC GELGSITARFLRHYPAAPAGTTVENPGAVTVAAMSSTDVAGAESDQARRPAETFGQRTSIYRGVTRHRWTGRYEAHLWDN SCRREGQSRKGRQVYLGGYDKEEKAARAYDLAALKYWGPTTTTNFPVSNYEKELEEMKSMTRQEFIASLRRKSSGFSRGA SIYRGVTRHHQHGRWQARIGRVAGNKDLYLGTFSTQEEAAEAYDIAAIKFRGLNAVTNFDMSRYDVESILSSDLPVGGGA SGRAPAKFPLDSLQPGSAAAMMLAGAAAASQATMPPSEKDYWSLLALHYQQQQEQERQFPASAYEAYGSGGVNVDFTMGT SSGNNNNNTGSGVMWGATTGAVVVGQQDSSGKQGNGYASNIPYAAAAMVSGSAGYEGSTGDNGTWVTTTTSSNTGTAPHY YNYLFGME* |
| CDS seq | >Zm.37553.1 ATGGACATGGACATGAGCTCAGCTTATCCCCACCATTGGCTCTCCTTCTCCCTCTCCAACAACTACCACCATGGCCTACT CGAAGCCTTCTCTAACTCCTCCGGTACTCCTCTTGGAGACGAGCAGGGCGCAGTGGAGGAGTCCCCGAGGACGGTGGAGG ACTTCCTCGGCGGCGTCGGTGGCGCCGGCGCCCCGCCGCAGCCGGCGGCGGCTGCAGATCAGGATCACCAGCTTGTGTGC GGCGAGCTGGGCAGCATCACAGCCAGGTTCTTGCGCCACTACCCGGCGGCGCCAGCTGGGACGACGGTGGAGAACCCCGG CGCGGTGACCGTGGCGGCCATGTCGTCGACGGACGTGGCCGGGGCGGAGTCCGACCAGGCGAGGCGGCCCGCCGAGACGT TCGGCCAGCGCACATCCATCTACCGTGGCGTCACCAGGCACCGGTGGACGGGGAGATATGAGGCGCACCTGTGGGACAAC AGCTGCCGCCGGGAGGGCCAAAGCCGCAAAGGACGGCAAGTCTACCTAGGAGGCTATGACAAGGAGGAGAAGGCGGCTAG AGCTTACGACCTCGCCGCGCTCAAGTACTGGGGGCCTACAACCACGACCAACTTCCCGGTGTCCAACTACGAGAAGGAGC TGGAGGAGATGAAGTCCATGACGCGGCAGGAGTTCATCGCGTCGTTGCGCAGGAAGAGCAGCGGCTTCTCACGAGGCGCC TCCATCTACAGAGGAGTCACAAGGCATCATCAGCACGGCCGGTGGCAGGCGAGGATCGGCAGGGTGGCCGGAAACAAGGA CCTGTACTTGGGCACTTTCAGTACTCAGGAAGAGGCGGCGGAGGCGTACGACATCGCTGCGATCAAGTTCCGCGGGCTCA ACGCCGTCACCAACTTTGACATGAGCCGCTACGACGTGGAGAGCATCCTCAGCAGCGACCTCCCCGTCGGGGGCGGAGCT AGCGGTCGCGCCCCCGCCAAGTTCCCGTTGGACTCGCTGCAGCCGGGGAGCGCTGCCGCCATGATGCTCGCCGGGGCTGC TGCCGCTTCGCAGGCCACCATGCCGCCGTCCGAGAAGGACTACTGGTCTCTGCTCGCCCTGCACTACCAGCAGCAGCAGG AGCAGGAGCGGCAGTTCCCGGCTTCTGCTTACGAGGCTTACGGCTCCGGCGGCGTGAACGTGGACTTCACGATGGGCACC AGTAGCGGCAACAACAACAACAACACCGGCAGCGGCGTCATGTGGGGCGCCACCACTGGTGCAGTAGTAGTGGGACAGCA AGACAGCAGCGGCAAGCAGGGCAACGGCTATGCCAGCAACATTCCTTATGCTGCTGCTGCTATGGTTTCTGGATCTGCTG GCTACGAGGGCTCCACCGGCGACAATGGAACCTGGGTTACTACGACTACCAGCAGCAACACCGGCACGGCTCCCCACTAC TACAACTATCTCTTCGGGATGGAGTAG |