| Microexon ID | Zm_5:188935263-188935271:+ |
| Species | Zea mays | Coordinates | 5:188935263..188935271 |
| Microexon Cluster ID | MEP21 |
| Size | 9 |
| Phase | 1 |
| Pfam Domain Motif | AP2 |
| Structure of Microexon-tag (flanking exon, microexon, flanking exon sizes) | 49,9,50 |
| Microexon location in the Microexon-tag | 2 |
| Microexon-tag DNA Seq | TGGGAYAAYAGYWSYWGRARWGARRGYCARAVYARGAARGGAARRCAAGTTTAYYTRGGKGSWTATGAYRAKGARGARRMWGCWGCWMGRGCWTATGAYYTDGCWGCW |
| Logo of Microexon-tag DNA Seq |  |
| Alignment of exons |  |
| Microexon DNA seq | TTTACCTTG |
| Microexon Amino Acid seq | VYLG |
| Microexon-tag DNA Seq | TGGGATAATAGTTGTAGAAGGGAAGGGCAGAGTCGCAAGGGTAGGCAAGTTTACCTTGGTGGCTATGACAAGGAGGACAAGGCAGCAAGGGCTTACGATTTGGCAGCT |
| Microexon-tag Amino Acid Seq | WDNSCRREGQSRKGRQVYLGGYDKEDKAARAYDLAA |
| Microexon-tag spanning region | 188935050-188935428 |
| Microexon-tag prediction score | 0.9646 |
| Overlapped with the annotated transcript (%) | 91.67 |
| New Transcript ID | Zm00001d017207_T001x |
| Reference Transcript ID | Zm00001d017207_T001 |
| Gene ID | Zm00001d017207 |
| Gene Name | AP2-EREBP-transcription factor 206 |
Zm_5:188935263-188935271:+ does not have available information here.
| Microexon DNA seq | TTTACCTTG |
| Microexon Amino Acid seq | VYLG |
| Microexon-tag DNA Seq | TGGGATAATAGTTGTAGAAGGGAAGGGCAGAGTCGCAAGGGTAGGCAAGTTTACCTTGGTGGCTATGACAAGGAGGACAAGGCAGCAAGGGCTTACGATTTGGCAGCT |
| Microexon-tag Amino Acid seq | WDNSCRREGQSRKGRQVYLGGYDKEDKAARAYDLAA |
| Transcript ID | Zm.24850.3 |
| Gene ID | Zm.24850 |
| Gene Name | AP2-EREBP-transcription factor 206 |
| Pfam domain motif | AP2 |
| Motif E-value | 8.4e-12 |
| Motif start | 279 |
| Motif end | 337 |
| Protein seq | >Zm.24850.3 MASANNWLGFSLSGQDNPQPNQDSSPAAGIDISGASDFYGLPTQQGSDGHLGVPGLRDDHASYGIMEAYNRVPQETQDWN MRGLDYNGGGSELSMLVGSSGGGGGNGKRAVEDSEPKLEDFLGGNSFVSDQDQSGGYLFSGVPIASSANSNSGSNTMELS MIKTWLRNNQVAQPQPPAPHQPQPEEMSTDASGSSFGCSDSMGRNSMVAAGGSSQSLALSMSTGSHLPMVVPSGAASGAA SESTSSENKRASGAMDSPGSAVEAVPRKSIDTFGQRTSIYRGVTRHRWTGRYEAHLWDNSCRREGQSRKGRQVYLGGYDK EDKAARAYDLAALKYWGTTTTTNFPISNYEKELEEMKHMTRQEYIAYLRRNSSGFSRGASKYRGVTRHHQHGRWQARIGR VAGNKDLYLGTFSTEEEAAEAYDIAAIKFRGLNAVTNFDMSRYDVKSILESSTLPVGGAARRLKDAVDHVEAGATIWRAD MDGAVISQLAEAGMGGYASYGHHGWPTIAFQQPSPLSVHYPYGQPSRGWCKPEQDAAAAAAHSLQDLQQLHLGSAAHNFF QASSSSTVYNGGAGASGGYQGLGGGSSFLMPSSTVVAAADQGHSSTANQGSTCSYGDDHQEGKLIGYDAAMVATAAGGDP YAAARNGYQFSQGSGSTVSIARANGYANNWSSPFNNGMG* |
| CDS seq | >Zm.24850.3 ATGGCTTCAGCGAACAACTGGCTGGGCTTCTCGCTCTCGGGCCAGGATAACCCGCAGCCTAACCAGGACAGCTCGCCTGC CGCCGGTATCGACATCTCCGGCGCCAGCGACTTCTATGGCCTGCCCACGCAGCAGGGCTCCGACGGGCATCTCGGCGTGC CGGGCCTGCGGGACGATCACGCTTCTTATGGTATCATGGAGGCCTACAACAGGGTTCCTCAAGAAACCCAAGATTGGAAC ATGAGGGGCTTGGACTACAACGGCGGTGGCTCGGAGCTCTCGATGCTTGTGGGGTCCAGCGGCGGCGGCGGGGGCAACGG CAAGAGGGCCGTGGAAGACAGCGAGCCCAAGCTCGAAGATTTCCTCGGCGGCAACTCGTTCGTCTCCGATCAAGATCAGT CCGGCGGTTACCTGTTCTCTGGAGTCCCGATAGCCAGCAGCGCCAATAGCAACAGCGGGAGCAACACCATGGAGCTCTCC ATGATCAAGACCTGGCTACGGAACAACCAGGTGGCCCAGCCCCAGCCGCCAGCTCCACATCAGCCGCAGCCTGAGGAAAT GAGCACCGACGCCAGCGGCAGCAGCTTTGGATGCTCGGATTCGATGGGAAGGAACAGCATGGTGGCGGCTGGTGGGAGCT CGCAGAGCCTGGCGCTCTCGATGAGCACGGGCTCGCACCTGCCCATGGTTGTGCCCAGCGGCGCCGCCAGCGGAGCGGCC TCGGAGAGCACATCGTCGGAGAACAAGCGAGCGAGCGGTGCCATGGATTCGCCCGGCAGCGCGGTAGAAGCCGTACCGAG GAAGTCCATCGACACGTTCGGGCAAAGGACCTCTATATATCGAGGTGTAACAAGGCATAGATGGACAGGGCGGTATGAGG CTCATCTATGGGATAATAGTTGTAGAAGGGAAGGGCAGAGTCGCAAGGGTAGGCAAGTTTACCTTGGTGGCTATGACAAG GAGGACAAGGCAGCAAGGGCTTACGATTTGGCAGCTCTCAAGTATTGGGGCACTACGACAACAACAAATTTCCCTATAAG CAACTACGAAAAAGAGCTAGAAGAAATGAAACATATGACTAGACAGGAGTACATTGCATACCTAAGAAGAAATAGCAGTG GATTTTCTCGTGGGGCATCAAAGTATCGTGGAGTAACTAGACATCATCAGCATGGGAGATGGCAAGCAAGGATAGGGAGA GTTGCAGGAAACAAGGATCTTTACTTGGGCACATTCAGCACCGAGGAGGAGGCGGCGGAGGCCTACGACATCGCCGCGAT CAAGTTCCGCGGTCTCAACGCCGTCACCAACTTCGACATGAGCCGCTACGACGTGAAGAGCATCCTCGAGAGCAGCACAC TGCCTGTCGGCGGTGCGGCCAGGCGCCTCAAGGACGCCGTGGACCACGTGGAGGCCGGCGCCACCATCTGGCGCGCCGAC ATGGACGGCGCCGTGATCTCCCAGCTGGCCGAAGCCGGGATGGGCGGCTACGCCTCGTACGGCCACCACGGCTGGCCGAC CATCGCGTTCCAGCAGCCGTCGCCGCTCTCCGTCCACTACCCGTACGGCCAGCCGTCCCGCGGGTGGTGCAAACCCGAGC AGGACGCGGCCGCCGCCGCGGCGCACAGCCTGCAGGACCTCCAGCAGCTGCACCTCGGCAGCGCGGCCCACAACTTCTTC CAGGCGTCGTCGAGCTCCACAGTCTACAACGGCGGCGCCGGCGCCAGTGGTGGGTACCAGGGCCTCGGTGGTGGCAGCTC TTTCCTCATGCCGTCGAGCACTGTCGTGGCGGCGGCCGACCAGGGGCACAGCAGCACGGCCAACCAGGGGAGCACGTGCA GCTACGGGGACGACCACCAGGAGGGGAAGCTCATCGGTTACGACGCCGCCATGGTGGCGACCGCAGCTGGTGGAGACCCG TACGCTGCGGCGAGGAACGGGTACCAGTTCTCGCAGGGCTCGGGATCCACGGTGAGCATCGCGAGGGCGAACGGGTACGC TAACAACTGGAGCTCTCCTTTCAACAACGGCATGGGGTGA |