Microexon ID Zm_4:189193678-189193686:-
Species Zea mays
Coordinates 4:189193678..189193686
Microexon Cluster ID MEP21
Size 9
Phase 1
Pfam Domain Motif AP2
Structure of Microexon-tag (flanking exon, microexon, flanking exon sizes) 49,9,50
Microexon location in the Microexon-tag 2
Microexon-tag DNA Seq TGGGAYAAYAGYWSYWGRARWGARRGYCARAVYARGAARGGAARRCAAGTTTAYYTRGGKGSWTATGAYRAKGARGARRMWGCWGCWMGRGCWTATGAYYTDGCWGCW
Logo of Microexon-tag DNA Seq NT60 Logo
Alignment of exons MSA
Zm_4:189193678-189193686:- does not have available information here.
Zm_4:189193678-189193686:- does not have available information here.
Microexon DNA seq TCTATCTGG
Microexon Amino Acid seq VYLG
Microexon-tag DNA Seq GACAAGCACTGCCTCGCCGCGCTCCACAACAAGAAGAAAGGCAGGCAAGTCTATCTGGGGGCGTACGACGGCGAGGAGGCAGCGGCTCGTGCCTATGACCTTGCAGCT
Microexon-tag Amino Acid seq DKHCLAALHNKKKGRQVYLGAYDGEEAAARAYDLAA
Transcript ID Zm.20233.1
Gene ID Zm.20233
Gene Name WRI1 transcription factor2
Pfam domain motif AP2
Motif E-value 4.2e-13
Motif start 65
Motif end 125
Protein seq >Zm.20233.1
MTMERSQPQHQQSPPSPSSSSSCVSADTVLVPPGKRRRRAATAKANKRARKDPSDPPPAAGKRSSVYRGVTRHRWTGRFE
AHLWDKHCLAALHNKKKGRQVYLGAYDGEEAAARAYDLAALKYWGPEALLNFPVEDYSSEMPEMEAASREEYLASLRRRS
SGFSRGVSKYRGVARHHHNGRWEARIGRVLGNKYLYLGTFDTQEEAAKAYDLAAIEYRGANAVTNFDISCYLDHPLFLAQ
LQQEQPQVVPALDQEPQADQREPETTAQEPVSSQAKTPADDNAEPDDIAEPLITVDNSVEESLWSPCMDYELDTMSRSNF
GSSINLSEWFTDADFDSDLGCLFDGRSAVDGGSKGGVGVADFSLFEAGDGQLKDVLSDMEEGIQPPTIISVCN*
CDS seq >Zm.20233.1
ATGACCATGGAGAGATCTCAACCGCAGCACCAGCAGTCTCCTCCGTCGCCGTCGTCCTCCTCGTCCTGCGTCTCCGCGGA
CACCGTCCTCGTCCCTCCGGGAAAGAGGCGGCGGAGGGCGGCGACAGCCAAGGCCAATAAGAGGGCCCGCAAGGACCCCT
CTGATCCTCCTCCCGCCGCCGGGAAGAGGAGCTCCGTATACAGAGGAGTCACCAGGCACAGGTGGACGGGCAGGTTCGAG
GCGCATCTCTGGGACAAGCACTGCCTCGCCGCGCTCCACAACAAGAAGAAAGGCAGGCAAGTCTATCTGGGGGCGTACGA
CGGCGAGGAGGCAGCGGCTCGTGCCTATGACCTTGCAGCTCTCAAGTACTGGGGTCCTGAGGCTCTGCTCAACTTCCCTG
TGGAGGATTACTCCAGCGAGATGCCGGAGATGGAGGCAGCGTCCCGGGAGGAGTACCTGGCCTCCCTCCGCCGCAGGAGC
AGCGGCTTCTCCAGGGGGGTCTCCAAGTACAGAGGCGTCGCCAGGCATCACCACAACGGGAGATGGGAGGCACGGATCGG
GCGAGTTTTAGGGAACAAGTACCTCTACTTGGGAACATTCGACACTCAAGAAGAGGCAGCCAAGGCCTATGATCTTGCGG
CCATCGAATACCGAGGTGCCAATGCTGTAACCAACTTCGACATCAGCTGCTACCTGGACCACCCACTGTTCCTGGCGCAG
CTCCAGCAGGAGCAGCCACAGGTGGTGCCAGCGCTCGACCAAGAACCTCAGGCTGATCAGAGAGAACCTGAAACCACAGC
CCAAGAGCCTGTGTCAAGCCAAGCCAAGACACCGGCGGATGACAATGCAGAGCCTGATGACATCGCGGAGCCCCTCATCA
CGGTCGACAACAGCGTCGAGGAGAGCTTATGGAGTCCTTGCATGGATTATGAGCTAGACACCATGTCGAGATCTAACTTT
GGCAGCTCGATCAACCTGAGCGAGTGGTTCACTGACGCAGACTTCGACAGCGACTTGGGATGCCTGTTCGACGGGCGCTC
TGCAGTTGATGGAGGAAGCAAGGGTGGCGTAGGTGTGGCGGATTTCAGTTTGTTTGAAGCAGGTGATGGTCAGCTGAAGG
ATGTTCTTTCGGATATGGAAGAGGGGATACAACCTCCAACGATAATCAGTGTGTGCAATTGA