
Microexon ID | Zm_4:189193678-189193686:- |
Species | Zea mays | Coordinates | 4:189193678..189193686 |
Microexon Cluster ID | MEP21 |
Size | 9 |
Phase | 1 |
Pfam Domain Motif | AP2 |
Structure of Microexon-tag (flanking exon, microexon, flanking exon sizes) | 49,9,50 |
Microexon location in the Microexon-tag | 2 |
Microexon-tag DNA Seq | TGGGAYAAYAGYWSYWGRARWGARRGYCARAVYARGAARGGAARRCAAGTTTAYYTRGGKGSWTATGAYRAKGARGARRMWGCWGCWMGRGCWTATGAYYTDGCWGCW |
Logo of Microexon-tag DNA Seq | ![]() |
Alignment of exons | ![]() |
Zm_4:189193678-189193686:- does not have available information here.
Zm_4:189193678-189193686:- does not have available information here.
Microexon DNA seq | TCTATCTGG |
Microexon Amino Acid seq | VYLG |
Microexon-tag DNA Seq | GACAAGCACTGCCTCGCCGCGCTCCACAACAAGAAGAAAGGCAGGCAAGTCTATCTGGGGGCGTACGACGGCGAGGAGGCAGCGGCTCGTGCCTATGACCTTGCAGCT |
Microexon-tag Amino Acid seq | DKHCLAALHNKKKGRQVYLGAYDGEEAAARAYDLAA |
Transcript ID | Zm.20233.1 |
Gene ID | Zm.20233 |
Gene Name | WRI1 transcription factor2 |
Pfam domain motif | AP2 |
Motif E-value | 4.2e-13 |
Motif start | 65 |
Motif end | 125 |
Protein seq | >Zm.20233.1 MTMERSQPQHQQSPPSPSSSSSCVSADTVLVPPGKRRRRAATAKANKRARKDPSDPPPAAGKRSSVYRGVTRHRWTGRFE AHLWDKHCLAALHNKKKGRQVYLGAYDGEEAAARAYDLAALKYWGPEALLNFPVEDYSSEMPEMEAASREEYLASLRRRS SGFSRGVSKYRGVARHHHNGRWEARIGRVLGNKYLYLGTFDTQEEAAKAYDLAAIEYRGANAVTNFDISCYLDHPLFLAQ LQQEQPQVVPALDQEPQADQREPETTAQEPVSSQAKTPADDNAEPDDIAEPLITVDNSVEESLWSPCMDYELDTMSRSNF GSSINLSEWFTDADFDSDLGCLFDGRSAVDGGSKGGVGVADFSLFEAGDGQLKDVLSDMEEGIQPPTIISVCN* |
CDS seq | >Zm.20233.1 ATGACCATGGAGAGATCTCAACCGCAGCACCAGCAGTCTCCTCCGTCGCCGTCGTCCTCCTCGTCCTGCGTCTCCGCGGA CACCGTCCTCGTCCCTCCGGGAAAGAGGCGGCGGAGGGCGGCGACAGCCAAGGCCAATAAGAGGGCCCGCAAGGACCCCT CTGATCCTCCTCCCGCCGCCGGGAAGAGGAGCTCCGTATACAGAGGAGTCACCAGGCACAGGTGGACGGGCAGGTTCGAG GCGCATCTCTGGGACAAGCACTGCCTCGCCGCGCTCCACAACAAGAAGAAAGGCAGGCAAGTCTATCTGGGGGCGTACGA CGGCGAGGAGGCAGCGGCTCGTGCCTATGACCTTGCAGCTCTCAAGTACTGGGGTCCTGAGGCTCTGCTCAACTTCCCTG TGGAGGATTACTCCAGCGAGATGCCGGAGATGGAGGCAGCGTCCCGGGAGGAGTACCTGGCCTCCCTCCGCCGCAGGAGC AGCGGCTTCTCCAGGGGGGTCTCCAAGTACAGAGGCGTCGCCAGGCATCACCACAACGGGAGATGGGAGGCACGGATCGG GCGAGTTTTAGGGAACAAGTACCTCTACTTGGGAACATTCGACACTCAAGAAGAGGCAGCCAAGGCCTATGATCTTGCGG CCATCGAATACCGAGGTGCCAATGCTGTAACCAACTTCGACATCAGCTGCTACCTGGACCACCCACTGTTCCTGGCGCAG CTCCAGCAGGAGCAGCCACAGGTGGTGCCAGCGCTCGACCAAGAACCTCAGGCTGATCAGAGAGAACCTGAAACCACAGC CCAAGAGCCTGTGTCAAGCCAAGCCAAGACACCGGCGGATGACAATGCAGAGCCTGATGACATCGCGGAGCCCCTCATCA CGGTCGACAACAGCGTCGAGGAGAGCTTATGGAGTCCTTGCATGGATTATGAGCTAGACACCATGTCGAGATCTAACTTT GGCAGCTCGATCAACCTGAGCGAGTGGTTCACTGACGCAGACTTCGACAGCGACTTGGGATGCCTGTTCGACGGGCGCTC TGCAGTTGATGGAGGAAGCAAGGGTGGCGTAGGTGTGGCGGATTTCAGTTTGTTTGAAGCAGGTGATGGTCAGCTGAAGG ATGTTCTTTCGGATATGGAAGAGGGGATACAACCTCCAACGATAATCAGTGTGTGCAATTGA |