| Microexon ID | Zm_2:4631269-4631277:+ |
| Species | Zea mays | Coordinates | 2:4631269..4631277 |
| Microexon Cluster ID | MEP21 |
| Size | 9 |
| Phase | 1 |
| Pfam Domain Motif | AP2 |
| Structure of Microexon-tag (flanking exon, microexon, flanking exon sizes) | 49,9,50 |
| Microexon location in the Microexon-tag | 2 |
| Microexon-tag DNA Seq | TGGGAYAAYAGYWSYWGRARWGARRGYCARAVYARGAARGGAARRCAAGTTTAYYTRGGKGSWTATGAYRAKGARGARRMWGCWGCWMGRGCWTATGAYYTDGCWGCW |
| Logo of Microexon-tag DNA Seq |  |
| Alignment of exons |  |
| Microexon DNA seq | TATATTTGG |
| Microexon Amino Acid seq | VYLG |
| Microexon-tag DNA Seq | TGGGACAACAGCTGCCGACGCGAAGGGCAGAGCCGCAAGGGCCGCCAAGTATATTTGGGTGGCTATGATAAGGAGGAGAAGGCTGCCAGGGCGTATGATCTTGCAGCT |
| Microexon-tag Amino Acid Seq | WDNSCRREGQSRKGRQVYLGGYDKEEKAARAYDLAA |
| Microexon-tag spanning region | 4631078-4631436 |
| Microexon-tag prediction score | 0.9592 |
| Overlapped with the annotated transcript (%) | 84.62 |
| New Transcript ID | Zm00001d002025_T002x |
| Reference Transcript ID | Zm00001d002025_T002 |
| Gene ID | Zm00001d002025 |
| Gene Name | AP2-EREBP-transcription factor 24 |
Zm_2:4631269-4631277:+ does not have available information here.
| Microexon DNA seq | TATATTTGG |
| Microexon Amino Acid seq | VYLG |
| Microexon-tag DNA Seq | TGGGACAACAGCTGCCGACGCGAAGGGCAGAGCCGCAAGGGCCGCCAAGTATATTTGGGTGGCTATGATAAGGAGGAGAAGGCTGCCAGGGCGTATGATCTTGCAGCT |
| Microexon-tag Amino Acid seq | WDNSCRREGQSRKGRQVYLGGYDKEEKAARAYDLAA |
| Transcript ID | Zm.8727.2 |
| Gene ID | Zm.8727 |
| Gene Name | AP2-EREBP-transcription factor 24 |
| Pfam domain motif | AP2 |
| Motif E-value | 6.5e-13 |
| Motif start | 127 |
| Motif end | 185 |
| Protein seq | >Zm.8727.2 MDTSHHYHPWLNFSLAHHCDLEEEERGAAAELAAIAGAAPPPKLEDFLGGGVATGGPEAVAPAEMYDSDLKFIAAAGFLG GSAAAAATSPLSSLDQAGSKLALPAAAAAPAPEQRKAVDSFGQRTSIYRGVTRHRWTGRYEAHLWDNSCRREGQSRKGRQ VYLGGYDKEEKAARAYDLAALKYWGSSTTTNFPVAEYEKEVEEMKNMTRQEFVASLRRKSSGFSRGASIYRGVTRHHQHG RWQARIGRVAGNKDLYLGTFSTEEEAAEAYDIAAIKFRGLNAVTNFEISRYNVETIMSSNLPVASMSSSAAAAAGGRSSK ALESPPSGSLDGGGGMPVVEASTAPPLFIPVKYDQQQQEYLSMLALQQHHQQQQAGNLLQGPLVGFGGLYSSGVNLDFAN SHGTAAPSSMAHHCYANGTASASHEHQHQMQQGGENETQPQPQQSSSSCSSLPFATPVAFNGSYESSITAAGPFGYSYPN VAAFQTPIYGME* |
| CDS seq | >Zm.8727.2 ATGGACACCTCGCACCACTATCATCCATGGCTCAACTTCTCCCTCGCCCACCACTGTGACCTCGAGGAGGAGGAGAGGGG CGCGGCCGCCGAGCTGGCCGCGATAGCCGGCGCCGCGCCGCCGCCGAAGCTGGAGGACTTCCTCGGCGGAGGCGTCGCCA CCGGTGGTCCGGAGGCGGTGGCGCCCGCGGAGATGTACGACTCGGACCTCAAGTTCATAGCCGCCGCCGGGTTCCTTGGC GGCTCGGCGGCGGCGGCGGCGACGTCGCCGCTGTCCTCCCTCGACCAGGCCGGTTCCAAGCTGGCCTTGCCTGCGGCGGC GGCTGCTCCGGCGCCGGAGCAGAGGAAGGCCGTCGACTCCTTTGGGCAGCGCACGTCCATCTACCGCGGCGTCACACGGC ACCGGTGGACTGGCAGGTACGAGGCACATCTGTGGGACAACAGCTGCCGACGCGAAGGGCAGAGCCGCAAGGGCCGCCAA GTATATTTGGGTGGCTATGATAAGGAGGAGAAGGCTGCCAGGGCGTATGATCTTGCAGCTTTGAAGTACTGGGGTTCTAG CACCACCACCAACTTTCCGGTTGCTGAGTATGAGAAGGAGGTCGAGGAGATGAAGAACATGACGCGACAAGAGTTTGTTG CTTCCCTTCGAAGGAAGAGCAGTGGATTCTCTCGGGGTGCTTCCATCTACCGAGGTGTAACCAGACATCACCAGCATGGA CGGTGGCAGGCGAGGATCGGAAGGGTGGCCGGTAACAAGGACCTCTACCTTGGGACGTTCAGCACCGAGGAGGAAGCTGC AGAGGCCTACGACATAGCGGCCATCAAGTTCAGAGGCCTGAACGCCGTCACAAACTTCGAGATCAGCCGGTACAACGTGG AGACCATAATGAGCAGCAACCTTCCAGTCGCGAGCATGTCGTCGTCGGCGGCGGCGGCGGCGGGTGGCCGGAGCAGCAAG GCGCTGGAGTCCCCTCCGTCCGGCTCGCTTGACGGCGGCGGCGGCATGCCAGTCGTCGAAGCCAGCACGGCACCGCCGCT GTTCATTCCGGTGAAGTACGACCAGCAGCAGCAGGAGTACCTGTCGATGCTCGCGTTGCAGCAGCACCACCAGCAGCAAC AAGCAGGGAACCTGTTGCAGGGGCCGCTAGTAGGGTTCGGCGGCCTCTACTCCTCCGGGGTGAACCTGGATTTCGCCAAC TCCCACGGCACGGCGGCTCCGTCGTCGATGGCCCACCACTGCTACGCCAATGGCACCGCCTCCGCCTCGCATGAGCACCA GCACCAGATGCAGCAGGGCGGCGAGAACGAGACGCAGCCGCAGCCGCAGCAGAGCTCCAGCAGCTGCTCCTCCCTGCCAT TCGCCACCCCGGTCGCTTTCAATGGGTCCTATGAAAGCTCCATCACGGCGGCAGGCCCCTTTGGATACTCCTACCCAAAT GTGGCAGCCTTTCAGACGCCGATCTATGGAATGGAATGA |