
Microexon ID | Zm_2:153922100-153922108:+ |
Species | Zea mays | Coordinates | 2:153922100..153922108 |
Microexon Cluster ID | MEP21 |
Size | 9 |
Phase | 1 |
Pfam Domain Motif | AP2 |
Structure of Microexon-tag (flanking exon, microexon, flanking exon sizes) | 49,9,50 |
Microexon location in the Microexon-tag | 2 |
Microexon-tag DNA Seq | TGGGAYAAYAGYWSYWGRARWGARRGYCARAVYARGAARGGAARRCAAGTTTAYYTRGGKGSWTATGAYRAKGARGARRMWGCWGCWMGRGCWTATGAYYTDGCWGCW |
Logo of Microexon-tag DNA Seq | ![]() |
Alignment of exons | ![]() |
Zm_2:153922100-153922108:+ does not have available information here.
Zm_2:153922100-153922108:+ does not have available information here.
Microexon DNA seq | TCTACCTGG |
Microexon Amino Acid seq | VYLG |
Microexon-tag DNA Seq | GACAAGCACTGCCTCGCCGCGCTCCACAACAAGAAGAAAGGCAGGCAAGTCTACCTGGGGGCGTATGACAGCGAGGAGGCAGCTGCTCGTGCCTATGACCTCGCAGCT |
Microexon-tag Amino Acid seq | DKHCLAALHNKKKGRQVYLGAYDSEEAAARAYDLAA |
Transcript ID | Zm.11010.1 |
Gene ID | Zm.11010 |
Gene Name | WRI1 transcription factor1 |
Pfam domain motif | AP2 |
Motif E-value | 1e-13 |
Motif start | 63 |
Motif end | 123 |
Protein seq | >Zm.11010.1 MERSQRQSPPPPSPSSSSSSVSADTVLVPPGKRRRAATAKAGAEPNKRIRKDPAAAAAGKRSSVYRGVTRHRWTGRFEAH LWDKHCLAALHNKKKGRQVYLGAYDSEEAAARAYDLAALKYWGPETLLNFPVEDYSSEMPEMEAVSREEYLASLRRRSSG FSRGVSKYRGVARHHHNGRWEARIGRVFGNKYLYLGTFDTQEEAAKAYDLAAIEYRGVNAVTNFDISCYLDHPLFLAQLQ QEPQVVPALNQEPQPDQSETGTTEQEPESSEAKTPDGSAEPDENAVPDDTAEPLTTVDDSIEEGLWSPCMDYELDTMSRP NFGSSINLSEWFADADFDCNIGCLFDGCSAADEGSKDGVGLADFSLFEAGDVQLKDVLSDMEEGIQPPAMISVCN* |
CDS seq | >Zm.11010.1 ATGGAGAGATCTCAACGGCAGTCTCCTCCGCCACCGTCGCCGTCCTCCTCCTCGTCCTCCGTCTCCGCGGACACCGTCCT CGTCCCTCCCGGAAAGAGGCGGAGGGCGGCGACGGCCAAGGCCGGCGCCGAGCCTAATAAGAGGATCCGCAAGGACCCCG CCGCCGCCGCCGCGGGGAAGAGGAGCTCCGTCTACAGGGGAGTCACCAGGCACAGGTGGACGGGCAGGTTCGAGGCGCAT CTCTGGGACAAGCACTGCCTCGCCGCGCTCCACAACAAGAAGAAAGGCAGGCAAGTCTACCTGGGGGCGTATGACAGCGA GGAGGCAGCTGCTCGTGCCTATGACCTCGCAGCTCTCAAGTACTGGGGTCCTGAGACTCTGCTCAACTTCCCTGTGGAGG ATTACTCCAGCGAGATGCCGGAGATGGAGGCCGTGTCCCGGGAGGAGTACCTGGCCTCCCTCCGCCGCAGGAGCAGCGGC TTCTCCAGGGGCGTCTCCAAGTACAGAGGCGTCGCCAGGCATCACCACAACGGGAGGTGGGAGGCACGGATTGGGCGAGT CTTTGGGAACAAGTACCTCTACTTGGGAACATTTGACACTCAAGAAGAGGCAGCCAAGGCCTATGACCTTGCGGCCATTG AATACCGTGGCGTCAATGCTGTAACCAACTTCGACATCAGCTGCTACCTGGACCACCCGCTGTTCCTGGCACAGCTCCAA CAGGAGCCACAGGTGGTGCCGGCACTCAACCAAGAACCTCAACCTGATCAGAGCGAAACCGGAACTACAGAGCAAGAGCC GGAGTCAAGCGAAGCCAAGACACCGGATGGCAGTGCAGAACCCGATGAGAACGCGGTGCCTGACGACACCGCGGAGCCCC TCACCACAGTCGACGACAGCATCGAAGAGGGCTTGTGGAGCCCTTGCATGGATTACGAGCTAGACACCATGTCGAGACCA AACTTTGGCAGCTCAATCAATCTGAGCGAGTGGTTCGCTGACGCAGACTTCGACTGCAACATCGGATGCCTGTTCGATGG GTGTTCTGCGGCTGACGAAGGAAGCAAGGATGGTGTAGGTCTGGCAGATTTCAGTCTGTTTGAGGCAGGTGATGTCCAGC TGAAGGATGTTCTTTCGGATATGGAAGAGGGGATACAACCTCCAGCGATGATCAGTGTGTGCAACTAA |