
Microexon ID | Vv_Un:38382947-38382955:+ |
Species | Vistis vinifera | Coordinates | Un:38382947..38382955 |
Microexon Cluster ID | MEP21 |
Size | 9 |
Phase | 1 |
Pfam Domain Motif | AP2 |
Structure of Microexon-tag (flanking exon, microexon, flanking exon sizes) | 49,9,50 |
Microexon location in the Microexon-tag | 2 |
Microexon-tag DNA Seq | TGGGAYAAYAGYWSYWGRARWGARRGYCARAVYARGAARGGAARRCAAGTTTAYYTRGGKGSWTATGAYRAKGARGARRMWGCWGCWMGRGCWTATGAYYTDGCWGCW |
Logo of Microexon-tag DNA Seq | ![]() |
Alignment of exons | ![]() |
Microexon DNA seq | TGTACTTGG |
Microexon Amino Acid seq | VYLG |
Microexon-tag DNA Seq | TGGGATAACAGCAGCAGAAGGGAGGGCCAGGCCAGGAAGGGGCGTCAAGTGTACTTGGGTGGGTATGACAAGGAAGAAAAGGCAGCAAGGGCCTATGATTTAGCAGCT |
Microexon-tag Amino Acid Seq | WDNSSRREGQARKGRQVYLGGYDKEEKAARAYDLAA |
Microexon-tag spanning region | 38381638-38383117 |
Microexon-tag prediction score | 0.9738 |
Overlapped with the annotated transcript (%) | 91.67 |
New Transcript ID | VIT_00s1291g00010.t01x |
Reference Transcript ID | VIT_00s1291g00010.t01 |
Gene ID | VIT_00s1291g00010 |
Gene Name | NA |
Vv_Un:38382947-38382955:+ does not have available information here.
Microexon DNA seq | TGTACTTGG |
Microexon Amino Acid seq | VYLG |
Microexon-tag DNA Seq | TGGGATAACAGCAGCAGAAGGGAGGGCCAGGCCAGGAAGGGGCGTCAAGTGTACTTGGGTGGGTATGACAAGGAAGAAAAGGCAGCAAGGGCCTATGATTTAGCAGCT |
Microexon-tag Amino Acid seq | WDNSSRREGQARKGRQVYLGGYDKEEKAARAYDLAA |
Transcript ID | Vv.36262.1 |
Gene ID | Vv.36262 |
Gene Name | NA |
Pfam domain motif | AP2 |
Motif E-value | 2e-12 |
Motif start | 235 |
Motif end | 293 |
Protein seq | >Vv.36262.1 MAPVTNWLSFSLSPMEMLRCSESQIMPYESSSAASPHYYVDNFYANGWTNPKPQVMYTEGDDYQVKEAATPSITNSSMLT SFVDPQLHHQQVPKLEDFLGGDSSSLVRYSESQTETQDSSLTHIYDHGSAYFNEQQDLKAIAATAGFQAFSTNSGSEVED SSSIGRTQLASSDFPGHSIESGNELAFSHCPTGALSLGVTTTTTTTQRSDQQAIVSADSDCSKKIADTFGQRTSIYRGVT RHRWTGRYEAHLWDNSSRREGQARKGRQVYLGGYDKEEKAARAYDLAALKYWGASATTNFPVSNYTKELEEMKHVTKQEF IASLRRKSSGFSRGASIYRGVTRHHQQGRWQARIGRVAGNKDLYLGTFATEEEAAEAYDIAAIKFRGVNAVTNFEMNRYD VEAIANSALPIGGAAKRLKLSLESDQKPCLNLDQQTQSSASSSGITFGAIQPIPAIPCGIPLDTATAFYHHNLFNHLHSS NMGASNSPGTTSSSMPTPMALLPPPAEFFIWPHQSY* |
CDS seq | >Vv.36262.1 ATGGCACCGGTGACTAACTGGCTCTCTTTTTCGCTCTCTCCCATGGAAATGCTGCGGTGTTCAGAGTCTCAGATTATGCC CTATGAGAGCTCGTCTGCTGCTTCTCCGCATTACTATGTCGATAACTTCTATGCAAACGGGTGGACAAATCCTAAGCCTC AAGTTATGTACACAGAAGGAGACGACTATCAAGTAAAAGAGGCTGCTACACCAAGCATTACCAACTCGTCCATGCTCACA AGCTTCGTCGACCCTCAACTCCATCACCAACAGGTTCCCAAGCTCGAGGACTTCCTTGGCGGCGACTCATCGTCCTTGGT CCGATATTCGGAGAGCCAAACAGAGACCCAAGATTCCTCCCTGACTCACATCTACGACCATGGTTCTGCTTACTTCAACG AACAACAAGATCTCAAAGCCATTGCGGCGACGGCAGGATTTCAAGCCTTTTCTACTAACTCGGGATCGGAAGTGGAAGAC TCATCGTCCATTGGGAGAACCCAGCTCGCATCGAGCGATTTTCCAGGTCATTCGATTGAGTCAGGGAACGAGTTGGCCTT CTCGCATTGTCCTACAGGGGCATTGTCACTTGGGGTTACGACTACGACTACGACTACTCAGAGATCTGATCAGCAGGCTA TTGTTTCAGCTGATTCTGATTGCTCTAAAAAGATTGCTGATACCTTTGGCCAAAGAACTTCTATTTACAGGGGAGTTACC AGACACAGGTGGACGGGTAGATATGAAGCGCATCTGTGGGATAACAGCAGCAGAAGGGAGGGCCAGGCCAGGAAGGGGCG TCAAGTGTACTTGGGTGGGTATGACAAGGAAGAAAAGGCAGCAAGGGCCTATGATTTAGCAGCTCTAAAGTACTGGGGTG CTTCTGCAACTACCAATTTCCCTGTTTCAAATTATACCAAAGAATTGGAGGAGATGAAACATGTGACCAAGCAAGAATTC ATCGCTTCACTGAGAAGGAAAAGTAGTGGCTTTTCAAGGGGAGCTTCCATTTACAGGGGTGTCACAAGGCATCATCAACA AGGTCGATGGCAAGCAAGGATAGGTCGAGTTGCTGGAAATAAAGACCTGTACCTGGGGACATTTGCCACCGAAGAGGAAG CAGCAGAGGCATATGACATAGCAGCCATAAAGTTCAGGGGTGTGAATGCGGTGACCAATTTCGAGATGAACCGATATGAT GTGGAAGCAATTGCAAATAGTGCTCTTCCCATTGGTGGAGCAGCAAAGCGGCTAAAGCTCTCGCTTGAATCAGATCAGAA GCCTTGTTTGAACCTGGACCAGCAAACTCAGTCCAGCGCCAGCAGCAGTGGCATCACTTTCGGCGCAATCCAACCAATTC CTGCAATCCCATGTGGAATTCCATTAGATACTGCAACTGCATTTTATCATCACAACCTCTTCAACCATCTTCACTCCAGT AACATGGGCGCCTCCAACTCCCCAGGCACGACCTCCTCCTCTATGCCAACCCCAATGGCTTTGTTGCCGCCTCCAGCTGA GTTTTTCATATGGCCTCACCAGTCCTACTGA |