Microexon ID Vv_Un:38382947-38382955:+
Species Vistis vinifera
Coordinates Un:38382947..38382955
Microexon Cluster ID MEP21
Size 9
Phase 1
Pfam Domain Motif AP2
Structure of Microexon-tag (flanking exon, microexon, flanking exon sizes) 49,9,50
Microexon location in the Microexon-tag 2
Microexon-tag DNA Seq TGGGAYAAYAGYWSYWGRARWGARRGYCARAVYARGAARGGAARRCAAGTTTAYYTRGGKGSWTATGAYRAKGARGARRMWGCWGCWMGRGCWTATGAYYTDGCWGCW
Logo of Microexon-tag DNA Seq NT60 Logo
Alignment of exons MSA
Microexon DNA seq TGTACTTGG
Microexon Amino Acid seq VYLG
Microexon-tag DNA Seq TGGGATAACAGCAGCAGAAGGGAGGGCCAGGCCAGGAAGGGGCGTCAAGTGTACTTGGGTGGGTATGACAAGGAAGAAAAGGCAGCAAGGGCCTATGATTTAGCAGCT
Microexon-tag Amino Acid Seq WDNSSRREGQARKGRQVYLGGYDKEEKAARAYDLAA
Microexon-tag spanning region38381638-38383117
Microexon-tag prediction score0.9738
Overlapped with the annotated transcript (%) 91.67
New Transcript ID VIT_00s1291g00010.t01x
Reference Transcript ID VIT_00s1291g00010.t01
Gene ID VIT_00s1291g00010
Gene Name NA
Vv_Un:38382947-38382955:+ does not have available information here.
Microexon DNA seq TGTACTTGG
Microexon Amino Acid seq VYLG
Microexon-tag DNA Seq TGGGATAACAGCAGCAGAAGGGAGGGCCAGGCCAGGAAGGGGCGTCAAGTGTACTTGGGTGGGTATGACAAGGAAGAAAAGGCAGCAAGGGCCTATGATTTAGCAGCT
Microexon-tag Amino Acid seq WDNSSRREGQARKGRQVYLGGYDKEEKAARAYDLAA
Transcript ID Vv.36262.1
Gene ID Vv.36262
Gene Name NA
Pfam domain motif AP2
Motif E-value 2e-12
Motif start 235
Motif end 293
Protein seq >Vv.36262.1
MAPVTNWLSFSLSPMEMLRCSESQIMPYESSSAASPHYYVDNFYANGWTNPKPQVMYTEGDDYQVKEAATPSITNSSMLT
SFVDPQLHHQQVPKLEDFLGGDSSSLVRYSESQTETQDSSLTHIYDHGSAYFNEQQDLKAIAATAGFQAFSTNSGSEVED
SSSIGRTQLASSDFPGHSIESGNELAFSHCPTGALSLGVTTTTTTTQRSDQQAIVSADSDCSKKIADTFGQRTSIYRGVT
RHRWTGRYEAHLWDNSSRREGQARKGRQVYLGGYDKEEKAARAYDLAALKYWGASATTNFPVSNYTKELEEMKHVTKQEF
IASLRRKSSGFSRGASIYRGVTRHHQQGRWQARIGRVAGNKDLYLGTFATEEEAAEAYDIAAIKFRGVNAVTNFEMNRYD
VEAIANSALPIGGAAKRLKLSLESDQKPCLNLDQQTQSSASSSGITFGAIQPIPAIPCGIPLDTATAFYHHNLFNHLHSS
NMGASNSPGTTSSSMPTPMALLPPPAEFFIWPHQSY*
CDS seq >Vv.36262.1
ATGGCACCGGTGACTAACTGGCTCTCTTTTTCGCTCTCTCCCATGGAAATGCTGCGGTGTTCAGAGTCTCAGATTATGCC
CTATGAGAGCTCGTCTGCTGCTTCTCCGCATTACTATGTCGATAACTTCTATGCAAACGGGTGGACAAATCCTAAGCCTC
AAGTTATGTACACAGAAGGAGACGACTATCAAGTAAAAGAGGCTGCTACACCAAGCATTACCAACTCGTCCATGCTCACA
AGCTTCGTCGACCCTCAACTCCATCACCAACAGGTTCCCAAGCTCGAGGACTTCCTTGGCGGCGACTCATCGTCCTTGGT
CCGATATTCGGAGAGCCAAACAGAGACCCAAGATTCCTCCCTGACTCACATCTACGACCATGGTTCTGCTTACTTCAACG
AACAACAAGATCTCAAAGCCATTGCGGCGACGGCAGGATTTCAAGCCTTTTCTACTAACTCGGGATCGGAAGTGGAAGAC
TCATCGTCCATTGGGAGAACCCAGCTCGCATCGAGCGATTTTCCAGGTCATTCGATTGAGTCAGGGAACGAGTTGGCCTT
CTCGCATTGTCCTACAGGGGCATTGTCACTTGGGGTTACGACTACGACTACGACTACTCAGAGATCTGATCAGCAGGCTA
TTGTTTCAGCTGATTCTGATTGCTCTAAAAAGATTGCTGATACCTTTGGCCAAAGAACTTCTATTTACAGGGGAGTTACC
AGACACAGGTGGACGGGTAGATATGAAGCGCATCTGTGGGATAACAGCAGCAGAAGGGAGGGCCAGGCCAGGAAGGGGCG
TCAAGTGTACTTGGGTGGGTATGACAAGGAAGAAAAGGCAGCAAGGGCCTATGATTTAGCAGCTCTAAAGTACTGGGGTG
CTTCTGCAACTACCAATTTCCCTGTTTCAAATTATACCAAAGAATTGGAGGAGATGAAACATGTGACCAAGCAAGAATTC
ATCGCTTCACTGAGAAGGAAAAGTAGTGGCTTTTCAAGGGGAGCTTCCATTTACAGGGGTGTCACAAGGCATCATCAACA
AGGTCGATGGCAAGCAAGGATAGGTCGAGTTGCTGGAAATAAAGACCTGTACCTGGGGACATTTGCCACCGAAGAGGAAG
CAGCAGAGGCATATGACATAGCAGCCATAAAGTTCAGGGGTGTGAATGCGGTGACCAATTTCGAGATGAACCGATATGAT
GTGGAAGCAATTGCAAATAGTGCTCTTCCCATTGGTGGAGCAGCAAAGCGGCTAAAGCTCTCGCTTGAATCAGATCAGAA
GCCTTGTTTGAACCTGGACCAGCAAACTCAGTCCAGCGCCAGCAGCAGTGGCATCACTTTCGGCGCAATCCAACCAATTC
CTGCAATCCCATGTGGAATTCCATTAGATACTGCAACTGCATTTTATCATCACAACCTCTTCAACCATCTTCACTCCAGT
AACATGGGCGCCTCCAACTCCCCAGGCACGACCTCCTCCTCTATGCCAACCCCAATGGCTTTGTTGCCGCCTCCAGCTGA
GTTTTTCATATGGCCTCACCAGTCCTACTGA