
Microexon ID | Vv_9:18938412-18938420:+ |
Species | Vistis vinifera | Coordinates | 9:18938412..18938420 |
Microexon Cluster ID | MEP21 |
Size | 9 |
Phase | 1 |
Pfam Domain Motif | AP2 |
Structure of Microexon-tag (flanking exon, microexon, flanking exon sizes) | 49,9,50 |
Microexon location in the Microexon-tag | 2 |
Microexon-tag DNA Seq | TGGGAYAAYAGYWSYWGRARWGARRGYCARAVYARGAARGGAARRCAAGTTTAYYTRGGKGSWTATGAYRAKGARGARRMWGCWGCWMGRGCWTATGAYYTDGCWGCW |
Logo of Microexon-tag DNA Seq | ![]() |
Alignment of exons | ![]() |
Microexon DNA seq | TGTATCTAG |
Microexon Amino Acid seq | VYLG |
Microexon-tag DNA Seq | TGGGATAAGAACTGCTGGAATGAGTCACAAAACAAAAAGGGAAGGCAAGTGTATCTAGGGGCTTATGATGATGAAGAAGCTGCAGCACATGCTTATGACTTGGCAGCA |
Microexon-tag Amino Acid Seq | WDKNCWNESQNKKGRQVYLGAYDDEEAAAHAYDLAA |
Microexon-tag spanning region | 18938222-18938648 |
Microexon-tag prediction score | 0.9668 |
Overlapped with the annotated transcript (%) | 100 |
New Transcript ID | VIT_09s0018g01650.t01x |
Reference Transcript ID | VIT_09s0018g01650.t01 |
Gene ID | VIT_09s0018g01650 |
Gene Name | NA |
Transcript ID | VIT_09s0018g01650.t01 |
Protein ID | VIT_09s0018g01650.t01 |
Gene ID | VIT_09s0018g01650 |
Gene Name | NA |
Pfam domain motif | AP2 |
Motif E-value | 1.3e-12 |
Motif start | 45 |
Motif end | 102 |
Protein seq | >VIT_09s0018g01650.t01 MAKTSQKSQKTTGNSTNNNGGSVAKVKRTRKSVPRDSPPQRSSIFRGVTRHRWTGRYEAHLWDKNCWNESQNKKGRQVYL GAYDDEEAAAHAYDLAALKYWGQETILNFPLSAYQEELKEMEGQSKEEYIGSLRRKSSGFSRGVSKYRGVARHHHNGRWE ARIGRVFGNKYLYLGTYATQEEAATAYDMAAIEYRGLNAVTNFDLSRYIKWLRPNQSDSVGSMQNPNGQSSPAPNPNPSD HELGLSFLQQQHGSDATELPLSHARSGAGGSGSGGGGGGASSALGLLLQSSKFKEMLERTSTADCPLTPPDQIEMPRSSF PDDIQTYFDCQETNSYGESDDIIFGDLKYFSSPMFQCELDT* |
CDS seq | >VIT_09s0018g01650.t01 ATGGCCAAGACCTCACAGAAGAGCCAGAAAACCACTGGTAATAGTACTAACAACAATGGTGGCAGTGTGGCCAAGGTCAA GAGGACTAGGAAGAGTGTCCCTAGAGACTCTCCCCCGCAGAGAAGCTCCATTTTTCGGGGCGTTACAAGGCACCGGTGGA CGGGTCGGTATGAGGCTCATTTGTGGGATAAGAACTGCTGGAATGAGTCACAAAACAAAAAGGGAAGGCAAGTGTATCTA GGGGCTTATGATGATGAAGAAGCTGCAGCACATGCTTATGACTTGGCAGCATTGAAGTACTGGGGTCAAGAGACCATTCT CAATTTCCCATTATCGGCATATCAAGAGGAGCTCAAAGAAATGGAAGGACAATCCAAAGAAGAATATATCGGATCTTTGA GGAGAAAAAGTAGTGGGTTTTCTCGAGGGGTGTCAAAATACAGAGGCGTAGCCAGGCACCATCATAATGGAAGATGGGAG GCTAGAATTGGAAGAGTTTTTGGCAACAAATATCTTTACCTTGGAACCTATGCCACCCAGGAGGAGGCAGCAACTGCATA TGACATGGCAGCTATAGAGTACAGAGGACTTAATGCTGTGACCAACTTTGACCTCAGCCGTTACATCAAGTGGCTTAGAC CTAACCAAAGTGATAGTGTTGGCTCCATGCAAAACCCTAATGGCCAAAGCAGCCCAGCTCCAAACCCTAACCCAAGTGAT CATGAGCTTGGCTTGAGCTTCCTCCAACAGCAGCATGGCTCGGATGCGACTGAGCTGCCTCTAAGCCATGCACGATCGGG TGCCGGTGGTAGTGGCAGTGGTGGTGGTGGTGGTGGTGCATCATCTGCACTTGGGCTTTTGTTACAGTCATCAAAATTCA AGGAAATGTTAGAGAGAACATCAACTGCAGACTGCCCATTGACTCCTCCAGATCAGATCGAGATGCCCAGGAGTAGCTTT CCAGATGACATTCAGACTTACTTTGATTGTCAGGAGACGAACAGCTATGGCGAGAGTGATGATATTATTTTTGGCGACTT GAAGTACTTCTCTTCCCCTATGTTCCAGTGCGAGCTTGACACATAA |
Microexon DNA seq | TGTATCTAG |
Microexon Amino Acid seq | VYLG |
Microexon-tag DNA Seq | TGGGATAAGAACTGCTGGAATGAGTCACAAAACAAAAAGGGAAGGCAAGTGTATCTAGGGGCTTATGATGATGAAGAAGCTGCAGCACATGCTTATGACTTGGCAGCA |
Microexon-tag Amino Acid seq | WDKNCWNESQNKKGRQVYLGAYDDEEAAAHAYDLAA |
Transcript ID | VIT_09s0018g01650.t01 |
Gene ID | Vv.33099 |
Gene Name | NA |
Pfam domain motif | AP2 |
Motif E-value | 1.3e-12 |
Motif start | 45 |
Motif end | 102 |
Protein seq | >VIT_09s0018g01650.t01 MAKTSQKSQKTTGNSTNNNGGSVAKVKRTRKSVPRDSPPQRSSIFRGVTRHRWTGRYEAHLWDKNCWNESQNKKGRQVYL GAYDDEEAAAHAYDLAALKYWGQETILNFPLSAYQEELKEMEGQSKEEYIGSLRRKSSGFSRGVSKYRGVARHHHNGRWE ARIGRVFGNKYLYLGTYATQEEAATAYDMAAIEYRGLNAVTNFDLSRYIKWLRPNQSDSVGSMQNPNGQSSPAPNPNPSD HELGLSFLQQQHGSDATELPLSHARSGAGGSGSGGGGGGASSALGLLLQSSKFKEMLERTSTADCPLTPPDQIEMPRSSF PDDIQTYFDCQETNSYGESDDIIFGDLKYFSSPMFQCELDT* |
CDS seq | >VIT_09s0018g01650.t01 ATGGCCAAGACCTCACAGAAGAGCCAGAAAACCACTGGTAATAGTACTAACAACAATGGTGGCAGTGTGGCCAAGGTCAA GAGGACTAGGAAGAGTGTCCCTAGAGACTCTCCCCCGCAGAGAAGCTCCATTTTTCGGGGCGTTACAAGGCACCGGTGGA CGGGTCGGTATGAGGCTCATTTGTGGGATAAGAACTGCTGGAATGAGTCACAAAACAAAAAGGGAAGGCAAGTGTATCTA GGGGCTTATGATGATGAAGAAGCTGCAGCACATGCTTATGACTTGGCAGCATTGAAGTACTGGGGTCAAGAGACCATTCT CAATTTCCCATTATCGGCATATCAAGAGGAGCTCAAAGAAATGGAAGGACAATCCAAAGAAGAATATATCGGATCTTTGA GGAGAAAAAGTAGTGGGTTTTCTCGAGGGGTGTCAAAATACAGAGGCGTAGCCAGGCACCATCATAATGGAAGATGGGAG GCTAGAATTGGAAGAGTTTTTGGCAACAAATATCTTTACCTTGGAACCTATGCCACCCAGGAGGAGGCAGCAACTGCATA TGACATGGCAGCTATAGAGTACAGAGGACTTAATGCTGTGACCAACTTTGACCTCAGCCGTTACATCAAGTGGCTTAGAC CTAACCAAAGTGATAGTGTTGGCTCCATGCAAAACCCTAATGGCCAAAGCAGCCCAGCTCCAAACCCTAACCCAAGTGAT CATGAGCTTGGCTTGAGCTTCCTCCAACAGCAGCATGGCTCGGATGCGACTGAGCTGCCTCTAAGCCATGCACGATCGGG TGCCGGTGGTAGTGGCAGTGGTGGTGGTGGTGGTGGTGCATCATCTGCACTTGGGCTTTTGTTACAGTCATCAAAATTCA AGGAAATGTTAGAGAGAACATCAACTGCAGACTGCCCATTGACTCCTCCAGATCAGATCGAGATGCCCAGGAGTAGCTTT CCAGATGACATTCAGACTTACTTTGATTGTCAGGAGACGAACAGCTATGGCGAGAGTGATGATATTATTTTTGGCGACTT GAAGTACTTCTCTTCCCCTATGTTCCAGTGCGAGCTTGACACATAA |