Microexon ID Vv_11:18417550-18417558:-
Species Vistis vinifera
Coordinates 11:18417550..18417558
Microexon Cluster ID MEP21
Size 9
Phase 1
Pfam Domain Motif AP2
Structure of Microexon-tag (flanking exon, microexon, flanking exon sizes) 49,9,50
Microexon location in the Microexon-tag 2
Microexon-tag DNA Seq TGGGAYAAYAGYWSYWGRARWGARRGYCARAVYARGAARGGAARRCAAGTTTAYYTRGGKGSWTATGAYRAKGARGARRMWGCWGCWMGRGCWTATGAYYTDGCWGCW
Logo of Microexon-tag DNA Seq NT60 Logo
Alignment of exons MSA
Microexon DNA seq TTTATTTGG
Microexon Amino Acid seq VYLG
Microexon-tag DNA Seq TGGGACAACAGCTGCAGAAGAGAAGGACAGAGCCGGAAGGGACGACAAGTTTATTTGGGTGGGTATGATAAGGAAGAGAAGGCAGCTAGAGCTTATGATCTCGCCGCT
Microexon-tag Amino Acid Seq WDNSCRREGQSRKGRQVYLGGYDKEEKAARAYDLAA
Microexon-tag spanning region18417363-18417898
Microexon-tag prediction score0.9818
Overlapped with the annotated transcript (%) 100
New Transcript ID VIT_11s0052g00840.t01x
Reference Transcript ID VIT_11s0052g00840.t01
Gene ID VIT_11s0052g00840
Gene Name NA
Transcript ID VIT_11s0052g00840.t01
Protein ID VIT_11s0052g00840.t01
Gene ID VIT_11s0052g00840
Gene Name NA
Pfam domain motif AP2
Motif E-value 3.7e-13
Motif start 141
Motif end 199
Protein seq >VIT_11s0052g00840.t01
MASNHNWLAFSLSNNSLPSDSSQLCLFEALSASTHHNGGVDREQGFPDRGGSDLIGGPKLEDFLGGGGGGGGAGAGLDQF
SAKTPAGLSDAEIYESELKTIAASFLRGFSSEQSEAQKQLALTPEPSPKKSVDTFGQRTSIYRGVTRHRWTGRYEAHLWD
NSCRREGQSRKGRQVYLGGYDKEEKAARAYDLAALKYWGPTTTTNFPVSNYEKELENMKNMTRQEFVASLRRKSSGFSRG
ASIYRGVTRHHQHGRWQARIGRVAGNKDLYLGTFSTQEEAAEAYDIAAIKFRGLNAVTNFDMSRYDVKSIANSNLPIGGA
ITTGKPKTSPSDSASDSGSRRSEEQVQVLSGPSNTLIFSKPLKQDHHQSVDYWSVLGYQASTLNSVVKNPILESSFPFQT
SSNLTMDFSTASAGFLCNGGGYIQQQQSNSSSSTASSSNSIPYATPVNGLNSSTSYEVSGYNSWAAATAAAAAAAAAPSL
HSFQAAKPSLSVFQTPIFGME*
CDS seq >VIT_11s0052g00840.t01
ATGGCTTCTAATCACAATTGGCTCGCCTTCTCTCTCTCCAACAACTCTCTCCCTTCCGACTCCTCCCAACTCTGCCTTTT
CGAAGCCCTCTCCGCCTCAACCCATCACAATGGGGGTGTTGATAGAGAGCAGGGTTTTCCGGATCGTGGTGGCAGTGACC
TCATCGGCGGCCCCAAGCTGGAGGACTTCCTCGGTGGAGGTGGAGGTGGAGGTGGAGCGGGTGCAGGTCTCGATCAGTTC
TCGGCTAAAACTCCGGCGGGTTTGTCTGATGCTGAGATATACGAGTCCGAGCTGAAGACCATAGCTGCGAGCTTCTTACG
TGGGTTTTCTTCAGAGCAAAGCGAGGCTCAGAAGCAGCTGGCGCTGACGCCGGAGCCGTCGCCGAAGAAGTCCGTCGACA
CCTTCGGCCAACGGACCTCCATTTACAGAGGAGTTACACGACATAGATGGACAGGGAGATATGAAGCCCATCTCTGGGAC
AACAGCTGCAGAAGAGAAGGACAGAGCCGGAAGGGACGACAAGTTTATTTGGGTGGGTATGATAAGGAAGAGAAGGCAGC
TAGAGCTTATGATCTCGCCGCTCTTAAGTACTGGGGTCCGACCACCACCACTAACTTCCCTGTTTCTAACTATGAGAAAG
AACTTGAGAATATGAAGAACATGACTAGGCAAGAGTTTGTTGCTTCACTCAGAAGGAAAAGCTCTGGATTCTCGAGAGGA
GCCTCTATTTACAGAGGAGTCACCAGACACCATCAGCATGGGAGATGGCAAGCCAGAATAGGAAGAGTTGCTGGGAACAA
AGATCTCTATCTTGGAACATTCAGCACTCAAGAAGAAGCAGCCGAAGCCTATGACATTGCTGCAATCAAATTCAGAGGCC
TAAATGCAGTAACCAACTTCGACATGAGCCGATACGATGTCAAAAGCATTGCCAACAGCAATCTCCCCATCGGAGGAGCA
ATAACCACTGGCAAACCAAAAACATCTCCCTCTGATTCTGCTTCCGATAGTGGAAGTCGCCGGTCTGAGGAGCAGGTTCA
GGTTCTCTCTGGCCCATCAAATACACTCATTTTTTCCAAACCCCTCAAGCAAGATCACCATCAATCGGTTGATTACTGGT
CCGTACTGGGGTACCAGGCCTCCACATTGAACAGTGTTGTGAAGAACCCCATATTGGAATCCTCCTTTCCATTTCAGACT
TCTAGCAACTTGACCATGGATTTCTCCACAGCTTCTGCAGGCTTCCTCTGCAATGGTGGTGGGTACATTCAACAACAACA
GAGCAACAGTAGTAGCAGCACTGCTTCAAGTTCAAACTCAATCCCATATGCAACACCCGTTAATGGTTTAAACAGCAGTA
CTAGCTATGAGGTCTCTGGGTACAACAGCTGGGCTGCTGCGACTGCTGCCGCTGCTGCTGCTGCTGCTGCACCATCTCTT
CATTCATTCCAAGCTGCAAAGCCCAGTCTCTCAGTGTTCCAAACCCCGATATTTGGCATGGAATGA
Microexon DNA seq TTTATTTGG
Microexon Amino Acid seq VYLG
Microexon-tag DNA Seq TGGGACAACAGCTGCAGAAGAGAAGGACAGAGCCGGAAGGGACGACAAGTTTATTTGGGTGGGTATGATAAGGAAGAGAAGGCAGCTAGAGCTTATGATCTCGCCGCT
Microexon-tag Amino Acid seq WDNSCRREGQSRKGRQVYLGGYDKEEKAARAYDLAA
Transcript ID VIT_11s0052g00840.t01
Gene ID Vv.4477
Gene Name NA
Pfam domain motif AP2
Motif E-value 3.7e-13
Motif start 141
Motif end 199
Protein seq >VIT_11s0052g00840.t01
MASNHNWLAFSLSNNSLPSDSSQLCLFEALSASTHHNGGVDREQGFPDRGGSDLIGGPKLEDFLGGGGGGGGAGAGLDQF
SAKTPAGLSDAEIYESELKTIAASFLRGFSSEQSEAQKQLALTPEPSPKKSVDTFGQRTSIYRGVTRHRWTGRYEAHLWD
NSCRREGQSRKGRQVYLGGYDKEEKAARAYDLAALKYWGPTTTTNFPVSNYEKELENMKNMTRQEFVASLRRKSSGFSRG
ASIYRGVTRHHQHGRWQARIGRVAGNKDLYLGTFSTQEEAAEAYDIAAIKFRGLNAVTNFDMSRYDVKSIANSNLPIGGA
ITTGKPKTSPSDSASDSGSRRSEEQVQVLSGPSNTLIFSKPLKQDHHQSVDYWSVLGYQASTLNSVVKNPILESSFPFQT
SSNLTMDFSTASAGFLCNGGGYIQQQQSNSSSSTASSSNSIPYATPVNGLNSSTSYEVSGYNSWAAATAAAAAAAAAPSL
HSFQAAKPSLSVFQTPIFGME*
CDS seq >VIT_11s0052g00840.t01
ATGGCTTCTAATCACAATTGGCTCGCCTTCTCTCTCTCCAACAACTCTCTCCCTTCCGACTCCTCCCAACTCTGCCTTTT
CGAAGCCCTCTCCGCCTCAACCCATCACAATGGGGGTGTTGATAGAGAGCAGGGTTTTCCGGATCGTGGTGGCAGTGACC
TCATCGGCGGCCCCAAGCTGGAGGACTTCCTCGGTGGAGGTGGAGGTGGAGGTGGAGCGGGTGCAGGTCTCGATCAGTTC
TCGGCTAAAACTCCGGCGGGTTTGTCTGATGCTGAGATATACGAGTCCGAGCTGAAGACCATAGCTGCGAGCTTCTTACG
TGGGTTTTCTTCAGAGCAAAGCGAGGCTCAGAAGCAGCTGGCGCTGACGCCGGAGCCGTCGCCGAAGAAGTCCGTCGACA
CCTTCGGCCAACGGACCTCCATTTACAGAGGAGTTACACGACATAGATGGACAGGGAGATATGAAGCCCATCTCTGGGAC
AACAGCTGCAGAAGAGAAGGACAGAGCCGGAAGGGACGACAAGTTTATTTGGGTGGGTATGATAAGGAAGAGAAGGCAGC
TAGAGCTTATGATCTCGCCGCTCTTAAGTACTGGGGTCCGACCACCACCACTAACTTCCCTGTTTCTAACTATGAGAAAG
AACTTGAGAATATGAAGAACATGACTAGGCAAGAGTTTGTTGCTTCACTCAGAAGGAAAAGCTCTGGATTCTCGAGAGGA
GCCTCTATTTACAGAGGAGTCACCAGACACCATCAGCATGGGAGATGGCAAGCCAGAATAGGAAGAGTTGCTGGGAACAA
AGATCTCTATCTTGGAACATTCAGCACTCAAGAAGAAGCAGCCGAAGCCTATGACATTGCTGCAATCAAATTCAGAGGCC
TAAATGCAGTAACCAACTTCGACATGAGCCGATACGATGTCAAAAGCATTGCCAACAGCAATCTCCCCATCGGAGGAGCA
ATAACCACTGGCAAACCAAAAACATCTCCCTCTGATTCTGCTTCCGATAGTGGAAGTCGCCGGTCTGAGGAGCAGGTTCA
GGTTCTCTCTGGCCCATCAAATACACTCATTTTTTCCAAACCCCTCAAGCAAGATCACCATCAATCGGTTGATTACTGGT
CCGTACTGGGGTACCAGGCCTCCACATTGAACAGTGTTGTGAAGAACCCCATATTGGAATCCTCCTTTCCATTTCAGACT
TCTAGCAACTTGACCATGGATTTCTCCACAGCTTCTGCAGGCTTCCTCTGCAATGGTGGTGGGTACATTCAACAACAACA
GAGCAACAGTAGTAGCAGCACTGCTTCAAGTTCAAACTCAATCCCATATGCAACACCCGTTAATGGTTTAAACAGCAGTA
CTAGCTATGAGGTCTCTGGGTACAACAGCTGGGCTGCTGCGACTGCTGCCGCTGCTGCTGCTGCTGCTGCACCATCTCTT
CATTCATTCCAAGCTGCAAAGCCCAGTCTCTCAGTGTTCCAAACCCCGATATTTGGCATGGAATGA