
Microexon ID | Vv_11:18417550-18417558:- |
Species | Vistis vinifera | Coordinates | 11:18417550..18417558 |
Microexon Cluster ID | MEP21 |
Size | 9 |
Phase | 1 |
Pfam Domain Motif | AP2 |
Structure of Microexon-tag (flanking exon, microexon, flanking exon sizes) | 49,9,50 |
Microexon location in the Microexon-tag | 2 |
Microexon-tag DNA Seq | TGGGAYAAYAGYWSYWGRARWGARRGYCARAVYARGAARGGAARRCAAGTTTAYYTRGGKGSWTATGAYRAKGARGARRMWGCWGCWMGRGCWTATGAYYTDGCWGCW |
Logo of Microexon-tag DNA Seq | ![]() |
Alignment of exons | ![]() |
Microexon DNA seq | TTTATTTGG |
Microexon Amino Acid seq | VYLG |
Microexon-tag DNA Seq | TGGGACAACAGCTGCAGAAGAGAAGGACAGAGCCGGAAGGGACGACAAGTTTATTTGGGTGGGTATGATAAGGAAGAGAAGGCAGCTAGAGCTTATGATCTCGCCGCT |
Microexon-tag Amino Acid Seq | WDNSCRREGQSRKGRQVYLGGYDKEEKAARAYDLAA |
Microexon-tag spanning region | 18417363-18417898 |
Microexon-tag prediction score | 0.9818 |
Overlapped with the annotated transcript (%) | 100 |
New Transcript ID | VIT_11s0052g00840.t01x |
Reference Transcript ID | VIT_11s0052g00840.t01 |
Gene ID | VIT_11s0052g00840 |
Gene Name | NA |
Transcript ID | VIT_11s0052g00840.t01 |
Protein ID | VIT_11s0052g00840.t01 |
Gene ID | VIT_11s0052g00840 |
Gene Name | NA |
Pfam domain motif | AP2 |
Motif E-value | 3.7e-13 |
Motif start | 141 |
Motif end | 199 |
Protein seq | >VIT_11s0052g00840.t01 MASNHNWLAFSLSNNSLPSDSSQLCLFEALSASTHHNGGVDREQGFPDRGGSDLIGGPKLEDFLGGGGGGGGAGAGLDQF SAKTPAGLSDAEIYESELKTIAASFLRGFSSEQSEAQKQLALTPEPSPKKSVDTFGQRTSIYRGVTRHRWTGRYEAHLWD NSCRREGQSRKGRQVYLGGYDKEEKAARAYDLAALKYWGPTTTTNFPVSNYEKELENMKNMTRQEFVASLRRKSSGFSRG ASIYRGVTRHHQHGRWQARIGRVAGNKDLYLGTFSTQEEAAEAYDIAAIKFRGLNAVTNFDMSRYDVKSIANSNLPIGGA ITTGKPKTSPSDSASDSGSRRSEEQVQVLSGPSNTLIFSKPLKQDHHQSVDYWSVLGYQASTLNSVVKNPILESSFPFQT SSNLTMDFSTASAGFLCNGGGYIQQQQSNSSSSTASSSNSIPYATPVNGLNSSTSYEVSGYNSWAAATAAAAAAAAAPSL HSFQAAKPSLSVFQTPIFGME* |
CDS seq | >VIT_11s0052g00840.t01 ATGGCTTCTAATCACAATTGGCTCGCCTTCTCTCTCTCCAACAACTCTCTCCCTTCCGACTCCTCCCAACTCTGCCTTTT CGAAGCCCTCTCCGCCTCAACCCATCACAATGGGGGTGTTGATAGAGAGCAGGGTTTTCCGGATCGTGGTGGCAGTGACC TCATCGGCGGCCCCAAGCTGGAGGACTTCCTCGGTGGAGGTGGAGGTGGAGGTGGAGCGGGTGCAGGTCTCGATCAGTTC TCGGCTAAAACTCCGGCGGGTTTGTCTGATGCTGAGATATACGAGTCCGAGCTGAAGACCATAGCTGCGAGCTTCTTACG TGGGTTTTCTTCAGAGCAAAGCGAGGCTCAGAAGCAGCTGGCGCTGACGCCGGAGCCGTCGCCGAAGAAGTCCGTCGACA CCTTCGGCCAACGGACCTCCATTTACAGAGGAGTTACACGACATAGATGGACAGGGAGATATGAAGCCCATCTCTGGGAC AACAGCTGCAGAAGAGAAGGACAGAGCCGGAAGGGACGACAAGTTTATTTGGGTGGGTATGATAAGGAAGAGAAGGCAGC TAGAGCTTATGATCTCGCCGCTCTTAAGTACTGGGGTCCGACCACCACCACTAACTTCCCTGTTTCTAACTATGAGAAAG AACTTGAGAATATGAAGAACATGACTAGGCAAGAGTTTGTTGCTTCACTCAGAAGGAAAAGCTCTGGATTCTCGAGAGGA GCCTCTATTTACAGAGGAGTCACCAGACACCATCAGCATGGGAGATGGCAAGCCAGAATAGGAAGAGTTGCTGGGAACAA AGATCTCTATCTTGGAACATTCAGCACTCAAGAAGAAGCAGCCGAAGCCTATGACATTGCTGCAATCAAATTCAGAGGCC TAAATGCAGTAACCAACTTCGACATGAGCCGATACGATGTCAAAAGCATTGCCAACAGCAATCTCCCCATCGGAGGAGCA ATAACCACTGGCAAACCAAAAACATCTCCCTCTGATTCTGCTTCCGATAGTGGAAGTCGCCGGTCTGAGGAGCAGGTTCA GGTTCTCTCTGGCCCATCAAATACACTCATTTTTTCCAAACCCCTCAAGCAAGATCACCATCAATCGGTTGATTACTGGT CCGTACTGGGGTACCAGGCCTCCACATTGAACAGTGTTGTGAAGAACCCCATATTGGAATCCTCCTTTCCATTTCAGACT TCTAGCAACTTGACCATGGATTTCTCCACAGCTTCTGCAGGCTTCCTCTGCAATGGTGGTGGGTACATTCAACAACAACA GAGCAACAGTAGTAGCAGCACTGCTTCAAGTTCAAACTCAATCCCATATGCAACACCCGTTAATGGTTTAAACAGCAGTA CTAGCTATGAGGTCTCTGGGTACAACAGCTGGGCTGCTGCGACTGCTGCCGCTGCTGCTGCTGCTGCTGCACCATCTCTT CATTCATTCCAAGCTGCAAAGCCCAGTCTCTCAGTGTTCCAAACCCCGATATTTGGCATGGAATGA |
Microexon DNA seq | TTTATTTGG |
Microexon Amino Acid seq | VYLG |
Microexon-tag DNA Seq | TGGGACAACAGCTGCAGAAGAGAAGGACAGAGCCGGAAGGGACGACAAGTTTATTTGGGTGGGTATGATAAGGAAGAGAAGGCAGCTAGAGCTTATGATCTCGCCGCT |
Microexon-tag Amino Acid seq | WDNSCRREGQSRKGRQVYLGGYDKEEKAARAYDLAA |
Transcript ID | VIT_11s0052g00840.t01 |
Gene ID | Vv.4477 |
Gene Name | NA |
Pfam domain motif | AP2 |
Motif E-value | 3.7e-13 |
Motif start | 141 |
Motif end | 199 |
Protein seq | >VIT_11s0052g00840.t01 MASNHNWLAFSLSNNSLPSDSSQLCLFEALSASTHHNGGVDREQGFPDRGGSDLIGGPKLEDFLGGGGGGGGAGAGLDQF SAKTPAGLSDAEIYESELKTIAASFLRGFSSEQSEAQKQLALTPEPSPKKSVDTFGQRTSIYRGVTRHRWTGRYEAHLWD NSCRREGQSRKGRQVYLGGYDKEEKAARAYDLAALKYWGPTTTTNFPVSNYEKELENMKNMTRQEFVASLRRKSSGFSRG ASIYRGVTRHHQHGRWQARIGRVAGNKDLYLGTFSTQEEAAEAYDIAAIKFRGLNAVTNFDMSRYDVKSIANSNLPIGGA ITTGKPKTSPSDSASDSGSRRSEEQVQVLSGPSNTLIFSKPLKQDHHQSVDYWSVLGYQASTLNSVVKNPILESSFPFQT SSNLTMDFSTASAGFLCNGGGYIQQQQSNSSSSTASSSNSIPYATPVNGLNSSTSYEVSGYNSWAAATAAAAAAAAAPSL HSFQAAKPSLSVFQTPIFGME* |
CDS seq | >VIT_11s0052g00840.t01 ATGGCTTCTAATCACAATTGGCTCGCCTTCTCTCTCTCCAACAACTCTCTCCCTTCCGACTCCTCCCAACTCTGCCTTTT CGAAGCCCTCTCCGCCTCAACCCATCACAATGGGGGTGTTGATAGAGAGCAGGGTTTTCCGGATCGTGGTGGCAGTGACC TCATCGGCGGCCCCAAGCTGGAGGACTTCCTCGGTGGAGGTGGAGGTGGAGGTGGAGCGGGTGCAGGTCTCGATCAGTTC TCGGCTAAAACTCCGGCGGGTTTGTCTGATGCTGAGATATACGAGTCCGAGCTGAAGACCATAGCTGCGAGCTTCTTACG TGGGTTTTCTTCAGAGCAAAGCGAGGCTCAGAAGCAGCTGGCGCTGACGCCGGAGCCGTCGCCGAAGAAGTCCGTCGACA CCTTCGGCCAACGGACCTCCATTTACAGAGGAGTTACACGACATAGATGGACAGGGAGATATGAAGCCCATCTCTGGGAC AACAGCTGCAGAAGAGAAGGACAGAGCCGGAAGGGACGACAAGTTTATTTGGGTGGGTATGATAAGGAAGAGAAGGCAGC TAGAGCTTATGATCTCGCCGCTCTTAAGTACTGGGGTCCGACCACCACCACTAACTTCCCTGTTTCTAACTATGAGAAAG AACTTGAGAATATGAAGAACATGACTAGGCAAGAGTTTGTTGCTTCACTCAGAAGGAAAAGCTCTGGATTCTCGAGAGGA GCCTCTATTTACAGAGGAGTCACCAGACACCATCAGCATGGGAGATGGCAAGCCAGAATAGGAAGAGTTGCTGGGAACAA AGATCTCTATCTTGGAACATTCAGCACTCAAGAAGAAGCAGCCGAAGCCTATGACATTGCTGCAATCAAATTCAGAGGCC TAAATGCAGTAACCAACTTCGACATGAGCCGATACGATGTCAAAAGCATTGCCAACAGCAATCTCCCCATCGGAGGAGCA ATAACCACTGGCAAACCAAAAACATCTCCCTCTGATTCTGCTTCCGATAGTGGAAGTCGCCGGTCTGAGGAGCAGGTTCA GGTTCTCTCTGGCCCATCAAATACACTCATTTTTTCCAAACCCCTCAAGCAAGATCACCATCAATCGGTTGATTACTGGT CCGTACTGGGGTACCAGGCCTCCACATTGAACAGTGTTGTGAAGAACCCCATATTGGAATCCTCCTTTCCATTTCAGACT TCTAGCAACTTGACCATGGATTTCTCCACAGCTTCTGCAGGCTTCCTCTGCAATGGTGGTGGGTACATTCAACAACAACA GAGCAACAGTAGTAGCAGCACTGCTTCAAGTTCAAACTCAATCCCATATGCAACACCCGTTAATGGTTTAAACAGCAGTA CTAGCTATGAGGTCTCTGGGTACAACAGCTGGGCTGCTGCGACTGCTGCCGCTGCTGCTGCTGCTGCTGCACCATCTCTT CATTCATTCCAAGCTGCAAAGCCCAGTCTCTCAGTGTTCCAAACCCCGATATTTGGCATGGAATGA |