Microexon ID Vv_1:10861365-10861373:-
Species Vistis vinifera
Coordinates 1:10861365..10861373
Microexon Cluster ID MEP21
Size 9
Phase 1
Pfam Domain Motif AP2
Structure of Microexon-tag (flanking exon, microexon, flanking exon sizes) 49,9,50
Microexon location in the Microexon-tag 2
Microexon-tag DNA Seq TGGGAYAAYAGYWSYWGRARWGARRGYCARAVYARGAARGGAARRCAAGTTTAYYTRGGKGSWTATGAYRAKGARGARRMWGCWGCWMGRGCWTATGAYYTDGCWGCW
Logo of Microexon-tag DNA Seq NT60 Logo
Alignment of exons MSA
Microexon DNA seq TCTATCTTG
Microexon Amino Acid seq VYLG
Microexon-tag DNA Seq TGGGATAAAGGGTCCTGGAATGTGACACAGAGAAAAAAGGGAAAGCAAGTCTATCTTGGAGCTTATGATGAAGAAGAATCTGCTGCAAGAGCGTATGACTTGGCCGCA
Microexon-tag Amino Acid Seq WDKGSWNVTQRKKGKQVYLGAYDEEESAARAYDLAA
Microexon-tag spanning region10861223-10861553
Microexon-tag prediction score0.9404
Overlapped with the annotated transcript (%) 91.67
New Transcript ID VIT_01s0026g01690.t01x
Reference Transcript ID VIT_01s0026g01690.t01
Gene ID VIT_01s0026g01690
Gene Name NA
Vv_1:10861365-10861373:- does not have available information here.
Microexon DNA seq TCTATCTTG
Microexon Amino Acid seq VYLG
Microexon-tag DNA Seq TGGGATAAAGGGTCCTGGAATGTGACACAGAGAAAAAAGGGAAAGCAAGTCTATCTTGGAGCTTATGATGAAGAAGAATCTGCTGCAAGAGCGTATGACTTGGCCGCA
Microexon-tag Amino Acid seq WDKGSWNVTQRKKGKQVYLGAYDEEESAARAYDLAA
Transcript ID Vv.1036.1
Gene ID Vv.1036
Gene Name NA
Pfam domain motif AP2
Motif E-value 9.5e-14
Motif start 74
Motif end 133
Protein seq >Vv.1036.1
MEMTTVKSELGLERGRLCTAETDALEVTKCVKRRRRDPSAVTPGCSKQGEQQKQVLLQAGQSITAIATTMKRSSRFRGVS
RHRWTGRFEAHLWDKGSWNVTQRKKGKQVYLGAYDEEESAARAYDLAALKYWGPSTFTNFPVSDYEKEIEIMQGLTKEEY
LASLRRRSSGFSRGVSKYRGVARHHHNGRWEARIGRVFGNKYLYLGTYSTQEEAAHAYDIAAIEYRGINAVTNFELSTYV
RWLRPRATALTPQEPRSNSIMQASSNCLPNEEVELSFLSPNPFTVDDLATPLKQEKFQREVSISPCTKSSSPTALSLLHR
SSVFRQLVEKNSNSIE*
CDS seq >Vv.1036.1
ATGGAGATGACTACAGTGAAATCTGAATTAGGCCTGGAAAGGGGCCGCTTGTGCACTGCAGAAACTGATGCTTTGGAGGT
GACCAAGTGTGTTAAGAGAAGGAGAAGAGATCCATCAGCAGTTACACCCGGATGCAGTAAACAAGGAGAGCAGCAGAAGC
AGGTGTTGCTGCAGGCTGGGCAATCCATTACTGCCATTGCCACTACTATGAAGAGAAGTTCAAGATTCAGGGGTGTTAGC
AGACATAGATGGACAGGGAGGTTTGAGGCTCATTTATGGGATAAAGGGTCCTGGAATGTGACACAGAGAAAAAAGGGAAA
GCAAGTCTATCTTGGAGCTTATGATGAAGAAGAATCTGCTGCAAGAGCGTATGACTTGGCCGCACTGAAGTATTGGGGGC
CATCAACTTTTACCAATTTCCCAGTATCAGATTATGAGAAGGAGATTGAAATAATGCAGGGTCTAACAAAGGAGGAATAC
TTGGCTTCTTTAAGAAGGAGAAGCAGTGGTTTTTCAAGAGGAGTGTCCAAGTACAGAGGAGTTGCAAGGCATCATCACAA
CGGAAGATGGGAAGCAAGGATTGGGAGGGTGTTTGGAAACAAGTATCTCTACCTTGGAACTTACAGTACCCAAGAAGAGG
CTGCTCATGCTTATGACATTGCAGCAATTGAGTACAGAGGGATCAATGCTGTAACAAACTTCGAGTTGAGCACATACGTA
AGGTGGCTGAGGCCCAGAGCCACTGCTCTTACCCCTCAGGAACCAAGATCAAATTCAATAATGCAAGCATCCTCTAACTG
CCTTCCAAATGAGGAAGTAGAGCTGTCCTTCCTCAGCCCCAATCCTTTTACAGTAGATGACTTGGCAACTCCTCTAAAGC
AAGAAAAGTTCCAAAGAGAGGTTTCCATCAGCCCTTGCACCAAGTCATCTTCGCCAACTGCACTAAGTCTCCTCCATAGA
TCTTCAGTATTTAGACAACTGGTGGAGAAGAATTCGAACAGCATCGAATAA