
Microexon ID | Vv_1:10861365-10861373:- |
Species | Vistis vinifera | Coordinates | 1:10861365..10861373 |
Microexon Cluster ID | MEP21 |
Size | 9 |
Phase | 1 |
Pfam Domain Motif | AP2 |
Structure of Microexon-tag (flanking exon, microexon, flanking exon sizes) | 49,9,50 |
Microexon location in the Microexon-tag | 2 |
Microexon-tag DNA Seq | TGGGAYAAYAGYWSYWGRARWGARRGYCARAVYARGAARGGAARRCAAGTTTAYYTRGGKGSWTATGAYRAKGARGARRMWGCWGCWMGRGCWTATGAYYTDGCWGCW |
Logo of Microexon-tag DNA Seq | ![]() |
Alignment of exons | ![]() |
Microexon DNA seq | TCTATCTTG |
Microexon Amino Acid seq | VYLG |
Microexon-tag DNA Seq | TGGGATAAAGGGTCCTGGAATGTGACACAGAGAAAAAAGGGAAAGCAAGTCTATCTTGGAGCTTATGATGAAGAAGAATCTGCTGCAAGAGCGTATGACTTGGCCGCA |
Microexon-tag Amino Acid Seq | WDKGSWNVTQRKKGKQVYLGAYDEEESAARAYDLAA |
Microexon-tag spanning region | 10861223-10861553 |
Microexon-tag prediction score | 0.9404 |
Overlapped with the annotated transcript (%) | 91.67 |
New Transcript ID | VIT_01s0026g01690.t01x |
Reference Transcript ID | VIT_01s0026g01690.t01 |
Gene ID | VIT_01s0026g01690 |
Gene Name | NA |
Vv_1:10861365-10861373:- does not have available information here.
Microexon DNA seq | TCTATCTTG |
Microexon Amino Acid seq | VYLG |
Microexon-tag DNA Seq | TGGGATAAAGGGTCCTGGAATGTGACACAGAGAAAAAAGGGAAAGCAAGTCTATCTTGGAGCTTATGATGAAGAAGAATCTGCTGCAAGAGCGTATGACTTGGCCGCA |
Microexon-tag Amino Acid seq | WDKGSWNVTQRKKGKQVYLGAYDEEESAARAYDLAA |
Transcript ID | Vv.1036.1 |
Gene ID | Vv.1036 |
Gene Name | NA |
Pfam domain motif | AP2 |
Motif E-value | 9.5e-14 |
Motif start | 74 |
Motif end | 133 |
Protein seq | >Vv.1036.1 MEMTTVKSELGLERGRLCTAETDALEVTKCVKRRRRDPSAVTPGCSKQGEQQKQVLLQAGQSITAIATTMKRSSRFRGVS RHRWTGRFEAHLWDKGSWNVTQRKKGKQVYLGAYDEEESAARAYDLAALKYWGPSTFTNFPVSDYEKEIEIMQGLTKEEY LASLRRRSSGFSRGVSKYRGVARHHHNGRWEARIGRVFGNKYLYLGTYSTQEEAAHAYDIAAIEYRGINAVTNFELSTYV RWLRPRATALTPQEPRSNSIMQASSNCLPNEEVELSFLSPNPFTVDDLATPLKQEKFQREVSISPCTKSSSPTALSLLHR SSVFRQLVEKNSNSIE* |
CDS seq | >Vv.1036.1 ATGGAGATGACTACAGTGAAATCTGAATTAGGCCTGGAAAGGGGCCGCTTGTGCACTGCAGAAACTGATGCTTTGGAGGT GACCAAGTGTGTTAAGAGAAGGAGAAGAGATCCATCAGCAGTTACACCCGGATGCAGTAAACAAGGAGAGCAGCAGAAGC AGGTGTTGCTGCAGGCTGGGCAATCCATTACTGCCATTGCCACTACTATGAAGAGAAGTTCAAGATTCAGGGGTGTTAGC AGACATAGATGGACAGGGAGGTTTGAGGCTCATTTATGGGATAAAGGGTCCTGGAATGTGACACAGAGAAAAAAGGGAAA GCAAGTCTATCTTGGAGCTTATGATGAAGAAGAATCTGCTGCAAGAGCGTATGACTTGGCCGCACTGAAGTATTGGGGGC CATCAACTTTTACCAATTTCCCAGTATCAGATTATGAGAAGGAGATTGAAATAATGCAGGGTCTAACAAAGGAGGAATAC TTGGCTTCTTTAAGAAGGAGAAGCAGTGGTTTTTCAAGAGGAGTGTCCAAGTACAGAGGAGTTGCAAGGCATCATCACAA CGGAAGATGGGAAGCAAGGATTGGGAGGGTGTTTGGAAACAAGTATCTCTACCTTGGAACTTACAGTACCCAAGAAGAGG CTGCTCATGCTTATGACATTGCAGCAATTGAGTACAGAGGGATCAATGCTGTAACAAACTTCGAGTTGAGCACATACGTA AGGTGGCTGAGGCCCAGAGCCACTGCTCTTACCCCTCAGGAACCAAGATCAAATTCAATAATGCAAGCATCCTCTAACTG CCTTCCAAATGAGGAAGTAGAGCTGTCCTTCCTCAGCCCCAATCCTTTTACAGTAGATGACTTGGCAACTCCTCTAAAGC AAGAAAAGTTCCAAAGAGAGGTTTCCATCAGCCCTTGCACCAAGTCATCTTCGCCAACTGCACTAAGTCTCCTCCATAGA TCTTCAGTATTTAGACAACTGGTGGAGAAGAATTCGAACAGCATCGAATAA |