Microexon ID Ta_7D:593238259-593238267:-
Species Triticum   Aestivum
Coordinates 7D:593238259..593238267
Microexon Cluster ID MEP21
Size 9
Phase 1
Pfam Domain Motif AP2
Structure of Microexon-tag (flanking exon, microexon, flanking exon sizes) 49,9,50
Microexon location in the Microexon-tag 2
Microexon-tag DNA Seq TGGGAYAAYAGYWSYWGRARWGARRGYCARAVYARGAARGGAARRCAAGTTTAYYTRGGKGSWTATGAYRAKGARGARRMWGCWGCWMGRGCWTATGAYYTDGCWGCW
Logo of Microexon-tag DNA Seq NT60 Logo
Alignment of exons MSA
Microexon DNA seq TCTATTTAG
Microexon Amino Acid seq VYLG
Microexon-tag DNA Seq TGGGACAACAGCTGCCGCCGGGAGGGCCAAAGCCGCAAAGGCCGCCAAGTCTATTTAGGAGGCTATGACAAGGAGGAGAAGGCGGCGAGGGCCTATGACATGGCCGCC
Microexon-tag Amino Acid Seq WDNSCRREGQSRKGRQVYLGGYDKEEKAARAYDMAA
Microexon-tag spanning region593238091-593238457
Microexon-tag prediction score0.9411
Overlapped with the annotated transcript (%) 100
New Transcript ID TraesCS7D02G483200.1x
Reference Transcript ID TraesCS7D02G483200.1
Gene ID TraesCS7D02G483200
Gene Name NA
Transcript ID TraesCS7D02G483200.1
Protein ID
Gene ID TraesCS7D02G483200
Gene Name
Pfam domain motif AP2
Motif E-value 1.80E-11
Motif start 131
Motif end 188
Protein seq >TraesCS7D02G483200.1
MDMDMSSATHPAHHWLSFSLSNNYHHGLLEALSSSSSAHQIAGDEAPVDEAPKMEDFLGCVGSAGTGSTAVVDHGELGSI
AAGFLHRYPAHDGMTDQNSGAVTVAAATMEVAESDQARRPAETFGQRTSIYRGVTRHRWTGRYEAHLWDNSCRREGQSRK
GRQVYLGGYDKEEKAARAYDMAALKYWGPTTTTNFPVSNYEKELEEMKSMTRQEFIASLRRKSSGFSRGASIYRGVTRHH
QHGRWQARIGRVAGNKDLYLGTFSTQEEAAEAYDIAAIKFRGLNAVTNFDMSRYDVESILNSDLPIGAGAAARASKFQPD
VLSLPAPNVASPDMLPPAEKDYWSLLALHYQQQQQQHLQQQQFPASAFDTYGSGVNVDFTMGMSGTNNPSGGGATVWGAT
GATGHGDGSRQSNSYASNIPYASMVSGSAASAGGGYEGSTGNNGTWVTTSNPAASATAPQYYNYLFGME*
CDS seq >TraesCS7D02G483200.1
ATGGATATGGACATGAGCTCCGCTACCCACCCCGCTCACCACTGGCTCTCCTTCTCCCTCTCCAACAACTACCACCACGG
CCTCCTCGAGGCCCTCTCCAGCTCCTCCTCCGCCCACCAGATCGCCGGAGATGAGGCGCCGGTGGATGAGGCGCCTAAGA
TGGAGGACTTCCTCGGCTGCGTCGGCAGCGCTGGGACGGGATCGACGGCTGTGGTGGACCACGGCGAGCTGGGCAGCATC
GCCGCGGGTTTCTTACACCGGTATCCGGCGCACGACGGGATGACGGATCAGAACTCTGGCGCGGTGACCGTCGCGGCGGC
GACGATGGAGGTTGCCGAGTCCGATCAGGCGAGGAGGCCCGCCGAGACATTTGGCCAGCGGACCTCCATCTACCGTGGCG
TCACCAGGCACCGGTGGACGGGGAGGTACGAGGCGCACCTGTGGGACAACAGCTGCCGCCGGGAGGGCCAAAGCCGCAAA
GGCCGCCAAGTCTATTTAGGAGGCTATGACAAGGAGGAGAAGGCGGCGAGGGCCTATGACATGGCCGCCCTGAAGTACTG
GGGCCCGACCACCACGACAAACTTCCCGGTGTCCAACTACGAGAAGGAGCTGGAGGAGATGAAGTCGATGACGCGGCAGG
AGTTCATCGCGTCGCTTCGCAGGAAGAGCAGCGGCTTCTCGCGAGGGGCATCCATCTACAGAGGAGTAACAAGGCATCAT
CAGCACGGCCGGTGGCAGGCAAGGATCGGCAGGGTGGCCGGAAACAAGGACCTGTACCTGGGAACTTTCAGCACGCAGGA
GGAGGCGGCGGAGGCGTACGACATTGCGGCGATCAAGTTCCGCGGGCTCAACGCGGTGACCAACTTCGACATGAGCCGCT
ACGACGTCGAGAGCATCCTCAACAGCGACCTGCCCATCGGCGCCGGGGCGGCCGCCCGCGCCTCCAAGTTCCAGCCAGAC
GTCCTATCGCTGCCCGCACCGAACGTGGCATCCCCAGACATGCTGCCCCCGGCGGAGAAGGACTACTGGTCCCTCCTCGC
CTTGCACTACCAGCAGCAGCAACAACAGCACCTGCAGCAGCAGCAGTTCCCCGCCTCGGCGTTCGACACCTACGGCTCCG
GCGTGAACGTGGACTTCACGATGGGCATGAGCGGCACCAACAACCCCAGCGGCGGCGGCGCCACCGTGTGGGGCGCCACC
GGCGCAACAGGGCACGGCGACGGCAGCAGGCAGAGCAACAGCTACGCCAGCAACATTCCTTATGCCTCCATGGTGTCCGG
ATCAGCGGCGTCAGCCGGCGGGGGGTACGAGGGCTCCACCGGCAACAATGGCACCTGGGTGACGACGAGCAACCCGGCCG
CCAGCGCGACGGCTCCTCAGTACTACAACTATCTGTTTGGCATGGAGTAG
Ta_7D:593238259-593238267:- does not have available information here.