
Microexon ID | Ta_7D:593238259-593238267:- |
Species | Triticum Aestivum | Coordinates | 7D:593238259..593238267 |
Microexon Cluster ID | MEP21 |
Size | 9 |
Phase | 1 |
Pfam Domain Motif | AP2 |
Structure of Microexon-tag (flanking exon, microexon, flanking exon sizes) | 49,9,50 |
Microexon location in the Microexon-tag | 2 |
Microexon-tag DNA Seq | TGGGAYAAYAGYWSYWGRARWGARRGYCARAVYARGAARGGAARRCAAGTTTAYYTRGGKGSWTATGAYRAKGARGARRMWGCWGCWMGRGCWTATGAYYTDGCWGCW |
Logo of Microexon-tag DNA Seq | ![]() |
Alignment of exons | ![]() |
Microexon DNA seq | TCTATTTAG |
Microexon Amino Acid seq | VYLG |
Microexon-tag DNA Seq | TGGGACAACAGCTGCCGCCGGGAGGGCCAAAGCCGCAAAGGCCGCCAAGTCTATTTAGGAGGCTATGACAAGGAGGAGAAGGCGGCGAGGGCCTATGACATGGCCGCC |
Microexon-tag Amino Acid Seq | WDNSCRREGQSRKGRQVYLGGYDKEEKAARAYDMAA |
Microexon-tag spanning region | 593238091-593238457 |
Microexon-tag prediction score | 0.9411 |
Overlapped with the annotated transcript (%) | 100 |
New Transcript ID | TraesCS7D02G483200.1x |
Reference Transcript ID | TraesCS7D02G483200.1 |
Gene ID | TraesCS7D02G483200 |
Gene Name | NA |
Transcript ID | TraesCS7D02G483200.1 |
Protein ID | |
Gene ID | TraesCS7D02G483200 |
Gene Name | |
Pfam domain motif | AP2 |
Motif E-value | 1.80E-11 |
Motif start | 131 |
Motif end | 188 |
Protein seq | >TraesCS7D02G483200.1 MDMDMSSATHPAHHWLSFSLSNNYHHGLLEALSSSSSAHQIAGDEAPVDEAPKMEDFLGCVGSAGTGSTAVVDHGELGSI AAGFLHRYPAHDGMTDQNSGAVTVAAATMEVAESDQARRPAETFGQRTSIYRGVTRHRWTGRYEAHLWDNSCRREGQSRK GRQVYLGGYDKEEKAARAYDMAALKYWGPTTTTNFPVSNYEKELEEMKSMTRQEFIASLRRKSSGFSRGASIYRGVTRHH QHGRWQARIGRVAGNKDLYLGTFSTQEEAAEAYDIAAIKFRGLNAVTNFDMSRYDVESILNSDLPIGAGAAARASKFQPD VLSLPAPNVASPDMLPPAEKDYWSLLALHYQQQQQQHLQQQQFPASAFDTYGSGVNVDFTMGMSGTNNPSGGGATVWGAT GATGHGDGSRQSNSYASNIPYASMVSGSAASAGGGYEGSTGNNGTWVTTSNPAASATAPQYYNYLFGME* |
CDS seq | >TraesCS7D02G483200.1 ATGGATATGGACATGAGCTCCGCTACCCACCCCGCTCACCACTGGCTCTCCTTCTCCCTCTCCAACAACTACCACCACGG CCTCCTCGAGGCCCTCTCCAGCTCCTCCTCCGCCCACCAGATCGCCGGAGATGAGGCGCCGGTGGATGAGGCGCCTAAGA TGGAGGACTTCCTCGGCTGCGTCGGCAGCGCTGGGACGGGATCGACGGCTGTGGTGGACCACGGCGAGCTGGGCAGCATC GCCGCGGGTTTCTTACACCGGTATCCGGCGCACGACGGGATGACGGATCAGAACTCTGGCGCGGTGACCGTCGCGGCGGC GACGATGGAGGTTGCCGAGTCCGATCAGGCGAGGAGGCCCGCCGAGACATTTGGCCAGCGGACCTCCATCTACCGTGGCG TCACCAGGCACCGGTGGACGGGGAGGTACGAGGCGCACCTGTGGGACAACAGCTGCCGCCGGGAGGGCCAAAGCCGCAAA GGCCGCCAAGTCTATTTAGGAGGCTATGACAAGGAGGAGAAGGCGGCGAGGGCCTATGACATGGCCGCCCTGAAGTACTG GGGCCCGACCACCACGACAAACTTCCCGGTGTCCAACTACGAGAAGGAGCTGGAGGAGATGAAGTCGATGACGCGGCAGG AGTTCATCGCGTCGCTTCGCAGGAAGAGCAGCGGCTTCTCGCGAGGGGCATCCATCTACAGAGGAGTAACAAGGCATCAT CAGCACGGCCGGTGGCAGGCAAGGATCGGCAGGGTGGCCGGAAACAAGGACCTGTACCTGGGAACTTTCAGCACGCAGGA GGAGGCGGCGGAGGCGTACGACATTGCGGCGATCAAGTTCCGCGGGCTCAACGCGGTGACCAACTTCGACATGAGCCGCT ACGACGTCGAGAGCATCCTCAACAGCGACCTGCCCATCGGCGCCGGGGCGGCCGCCCGCGCCTCCAAGTTCCAGCCAGAC GTCCTATCGCTGCCCGCACCGAACGTGGCATCCCCAGACATGCTGCCCCCGGCGGAGAAGGACTACTGGTCCCTCCTCGC CTTGCACTACCAGCAGCAGCAACAACAGCACCTGCAGCAGCAGCAGTTCCCCGCCTCGGCGTTCGACACCTACGGCTCCG GCGTGAACGTGGACTTCACGATGGGCATGAGCGGCACCAACAACCCCAGCGGCGGCGGCGCCACCGTGTGGGGCGCCACC GGCGCAACAGGGCACGGCGACGGCAGCAGGCAGAGCAACAGCTACGCCAGCAACATTCCTTATGCCTCCATGGTGTCCGG ATCAGCGGCGTCAGCCGGCGGGGGGTACGAGGGCTCCACCGGCAACAATGGCACCTGGGTGACGACGAGCAACCCGGCCG CCAGCGCGACGGCTCCTCAGTACTACAACTATCTGTTTGGCATGGAGTAG |
Ta_7D:593238259-593238267:- does not have available information here.