
Microexon ID | Ta_7D:358474526-358474534:+ |
Species | Triticum Aestivum | Coordinates | 7D:358474526..358474534 |
Microexon Cluster ID | MEP21 |
Size | 9 |
Phase | 1 |
Pfam Domain Motif | AP2 |
Structure of Microexon-tag (flanking exon, microexon, flanking exon sizes) | 49,9,50 |
Microexon location in the Microexon-tag | 2 |
Microexon-tag DNA Seq | TGGGAYAAYAGYWSYWGRARWGARRGYCARAVYARGAARGGAARRCAAGTTTAYYTRGGKGSWTATGAYRAKGARGARRMWGCWGCWMGRGCWTATGAYYTDGCWGCW |
Logo of Microexon-tag DNA Seq | ![]() |
Alignment of exons | ![]() |
Microexon DNA seq | TGTACTTGG |
Microexon Amino Acid seq | VYLG |
Microexon-tag DNA Seq | TGGGACAACACCAGCCAGGTTGAGGGGCGCAAGCGCAAGGGCAAGCATGTGTACTTGGGAAGCTATGTTACTGAAGAGAATGCTGCAAGGGCACATGACCTTGCAGCC |
Microexon-tag Amino Acid Seq | WDNTSQVEGRKRKGKHVYLGSYVTEENAARAHDLAA |
Microexon-tag spanning region | 358473843-358474668 |
Microexon-tag prediction score | 0.9171 |
Overlapped with the annotated transcript (%) | 100 |
New Transcript ID | TraesCS7D02G292500.1x |
Reference Transcript ID | TraesCS7D02G292500.1 |
Gene ID | TraesCS7D02G292500 |
Gene Name | NA |
Transcript ID | TraesCS7D02G292500.1 |
Protein ID | |
Gene ID | TraesCS7D02G292500 |
Gene Name | |
Pfam domain motif | AP2 |
Motif E-value | 1.00E-09 |
Motif start | 81 |
Motif end | 140 |
Protein seq | >TraesCS7D02G292500.1 MATTVQPHSPDPTAITTTPAPPPPPSPPRQENPTAAGEGVEIAALDEQPAAVAVADKGKTAPGGGKLVAEAMRKCAAPRS SRYHGVTRLKWSGKYEAHLWDNTSQVEGRKRKGKHVYLGSYVTEENAARAHDLAALKYWGITQPTKLNFNISDYAKEIEI MKSMNQDEFVAYIRRQSSCFSRGTSSYRGVTRRKDGKWQARIGRIGESRDTKDIYLGTFETEVEAAEAYDLAAIQLRGVH AVTNFDISNYSEEGLKKLEGSSEVVNLEDQSEVTKLAVTNLDISKHCEDGLKKLDGASQVVNLEGQSEVTKLSVTNFDIS NCCEDGLKKLEGSSEVANLEDQSEVTKLAGQ* |
CDS seq | >TraesCS7D02G292500.1 ATGGCCACCACCGTCCAACCCCACTCCCCGGACCCAACAGCCATCACCACCACCCCTGCCCCTCCCCCTCCTCCTTCTCC ACCTCGCCAGGAGAACCCGACCGCCGCGGGGGAAGGCGTAGAGATCGCGGCGCTCGATGAGCAGCCTGCCGCCGTCGCCG TCGCCGACAAGGGGAAGACGGCCCCCGGCGGCGGGAAGCTGGTGGCGGAGGCCATGCGCAAGTGCGCGGCGCCCCGGTCG TCGCGCTACCACGGCGTGACGAGGCTCAAGTGGAGCGGCAAGTACGAGGCACACCTCTGGGACAACACCAGCCAGGTTGA GGGGCGCAAGCGCAAGGGCAAGCATGTGTACTTGGGAAGCTATGTTACTGAAGAGAATGCTGCAAGGGCACATGACCTTG CAGCCCTGAAATATTGGGGCATAACTCAACCCACCAAACTAAACTTCAATATTTCTGATTATGCAAAAGAAATTGAGATC ATGAAGAGCATGAATCAAGATGAATTTGTGGCCTACATAAGGAGGCAGAGTAGTTGTTTCTCAAGAGGAACATCGTCATA CAGGGGTGTAACAAGACGAAAGGATGGTAAATGGCAAGCACGTATTGGTAGGATTGGTGAGAGTAGAGACACTAAAGACA TCTATCTTGGGACCTTTGAAACTGAAGTGGAGGCAGCTGAAGCGTATGACCTAGCAGCAATTCAGCTCCGTGGTGTTCAT GCTGTGACCAACTTTGATATCAGCAACTACTCCGAAGAAGGTTTGAAGAAACTAGAAGGCTCATCTGAGGTAGTGAACCT GGAGGACCAATCAGAAGTCACTAAGTTAGCTGTGACCAACTTGGATATTAGCAAACACTGCGAAGATGGTTTGAAGAAAC TAGATGGCGCATCCCAGGTAGTGAACCTGGAGGGCCAATCAGAAGTCACCAAGTTATCTGTGACTAACTTTGATATTAGC AACTGCTGTGAAGATGGTTTGAAGAAACTAGAAGGCTCATCCGAGGTAGCGAACCTGGAGGACCAATCAGAAGTCACAAA GTTAGCTGGACAATAG |
Ta_7D:358474526-358474534:+ does not have available information here.