
Microexon ID | Ta_7B:667747846-667747854:+ |
Species | Triticum Aestivum | Coordinates | 7B:667747846..667747854 |
Microexon Cluster ID | MEP21 |
Size | 9 |
Phase | 1 |
Pfam Domain Motif | AP2 |
Structure of Microexon-tag (flanking exon, microexon, flanking exon sizes) | 49,9,50 |
Microexon location in the Microexon-tag | 2 |
Microexon-tag DNA Seq | TGGGAYAAYAGYWSYWGRARWGARRGYCARAVYARGAARGGAARRCAAGTTTAYYTRGGKGSWTATGAYRAKGARGARRMWGCWGCWMGRGCWTATGAYYTDGCWGCW |
Logo of Microexon-tag DNA Seq | ![]() |
Alignment of exons | ![]() |
Microexon DNA seq | TCTATTTAG |
Microexon Amino Acid seq | VYLG |
Microexon-tag DNA Seq | TGGGACAACAGCTGCCGCCGGGAGGGCCAAAGCCGCAAAGGCCGCCAAGTCTATTTAGGAGGCTATGACAAGGAGGAGAAGGCGGCGAGGGCCTACGACATGGCCGCC |
Microexon-tag Amino Acid Seq | WDNSCRREGQSRKGRQVYLGGYDKEEKAARAYDMAA |
Microexon-tag spanning region | 667747649-667748021 |
Microexon-tag prediction score | 0.9389 |
Overlapped with the annotated transcript (%) | 100 |
New Transcript ID | TraesCS7B02G401400.1x |
Reference Transcript ID | TraesCS7B02G401400.1 |
Gene ID | TraesCS7B02G401400 |
Gene Name | NA |
Transcript ID | TraesCS7B02G401400.1 |
Protein ID | |
Gene ID | TraesCS7B02G401400 |
Gene Name | |
Pfam domain motif | AP2 |
Motif E-value | 1.80E-11 |
Motif start | 128 |
Motif end | 185 |
Protein seq | >TraesCS7B02G401400.1 MDMDMSSATHPAHHWLSFSLSNNYHHGLLEALSSSSSGHQIAGEEAPVDEAPKMEDFLGGVGTASTAVVDHGELGSIAAG FLHRYPAHDGTLDQNSGAVTVAAATMEVAESDQARRPAETFGQRTSIYRGVTRHRWTGRYEAHLWDNSCRREGQSRKGRQ VYLGGYDKEEKAARAYDMAALKYWGPTTTTNFPVANYEKELEEMKSMTRQEFIASLRRKSSGFSRGASIYRGVTRHHQHG RWQARIGRVAGNKDLYLGTFSTQEEAAEAYDIAAIKFRGLNAVTNFDMSRYDVESILNSDLPIGAGAAARASKFQPDVLS LPAPNVASPDMLPPAEKDYWSLLAMHYQQQQQQHLQQQQFPGSAFDAYGSGVNVDFTMGMSGTNNPSGGGATVWGATGAT GHGGDGSRQSNSYASNIPYTSMLSGSAASAGGGYEGSTGNNGTWVTTSNPAAGTTAPQYYNYLFGME* |
CDS seq | >TraesCS7B02G401400.1 ATGGATATGGACATGAGCTCCGCTACCCACCCTGCTCACCACTGGCTCTCCTTCTCCCTCTCCAACAACTACCACCACGG CCTCCTCGAGGCCCTCTCCAGCTCCTCCTCCGGCCACCAGATCGCCGGAGAGGAGGCGCCGGTGGACGAGGCGCCTAAGA TGGAAGACTTCCTCGGAGGTGTCGGCACGGCATCGACAGCTGTGGTGGACCACGGTGAGCTGGGTAGCATCGCCGCCGGG TTCTTGCACCGGTATCCGGCACATGACGGGACGCTAGATCAGAACTCTGGCGCGGTGACCGTCGCGGCGGCCACGATGGA GGTTGCCGAGTCCGATCAGGCGAGGAGGCCCGCCGAGACGTTCGGCCAGCGGACCTCCATCTACCGCGGCGTCACCAGGC ACCGGTGGACGGGGAGGTACGAGGCGCACCTGTGGGACAACAGCTGCCGCCGGGAGGGCCAAAGCCGCAAAGGCCGCCAA GTCTATTTAGGAGGCTATGACAAGGAGGAGAAGGCGGCGAGGGCCTACGACATGGCCGCCCTGAAGTACTGGGGCCCGAC CACCACGACAAACTTCCCGGTGGCCAACTACGAGAAGGAGCTGGAGGAGATGAAGTCGATGACACGGCAGGAGTTCATCG CCTCCCTTCGCAGGAAGAGCAGCGGCTTCTCTCGAGGGGCGTCCATCTACAGAGGAGTAACAAGGCATCATCAGCACGGC CGGTGGCAGGCAAGGATCGGCAGGGTGGCCGGAAACAAGGACCTGTACCTGGGAACTTTCAGCACGCAGGAGGAGGCGGC GGAGGCGTACGACATCGCGGCGATCAAATTCCGCGGGCTCAACGCCGTGACCAACTTCGACATGAGCCGCTACGACGTCG AGAGCATCCTCAACAGCGACCTGCCCATCGGTGCCGGGGCGGCCGCCCGCGCCTCCAAGTTCCAGCCAGACGTCCTATCG CTGCCCGCACCGAATGTCGCATCCCCAGACATGCTGCCGCCGGCGGAGAAGGACTACTGGTCCCTCCTCGCCATGCACTA CCAGCAGCAGCAGCAACAGCACCTGCAGCAGCAGCAGTTCCCCGGCTCGGCATTTGACGCCTATGGCTCCGGCGTGAACG TGGACTTCACGATGGGCATGAGCGGCACCAACAACCCCAGCGGCGGCGGCGCCACCGTGTGGGGCGCCACCGGCGCAACA GGACACGGCGGTGACGGCAGCAGGCAGAGCAACAGCTACGCCAGCAACATTCCTTATACCTCCATGCTGTCCGGATCAGC GGCGTCAGCCGGCGGGGGGTACGAGGGCTCCACCGGCAACAATGGCACCTGGGTGACGACGAGCAACCCGGCCGCCGGCA CGACGGCGCCGCAGTACTACAACTATCTGTTTGGCATGGAGTAG |
Ta_7B:667747846-667747854:+ does not have available information here.