Microexon ID Ta_7B:312442635-312442643:-
Species Triticum   Aestivum
Coordinates 7B:312442635..312442643
Microexon Cluster ID MEP21
Size 9
Phase 1
Pfam Domain Motif AP2
Structure of Microexon-tag (flanking exon, microexon, flanking exon sizes) 49,9,50
Microexon location in the Microexon-tag 2
Microexon-tag DNA Seq TGGGAYAAYAGYWSYWGRARWGARRGYCARAVYARGAARGGAARRCAAGTTTAYYTRGGKGSWTATGAYRAKGARGARRMWGCWGCWMGRGCWTATGAYYTDGCWGCW
Logo of Microexon-tag DNA Seq NT60 Logo
Alignment of exons MSA
Microexon DNA seq TGTACTTGG
Microexon Amino Acid seq VYLG
Microexon-tag DNA Seq TGGGACAACACCAGCCAGGTTGAGGGGCGCAAGCGCAAGGGCAAGCATGTGTACTTGGGAAGCTATGTTACTGAAGAGAATGCTGCAAGGGCACATGACCTTGCAGCC
Microexon-tag Amino Acid Seq WDNTSQVEGRKRKGKHVYLGSYVTEENAARAHDLAA
Microexon-tag spanning region312442501-312443323
Microexon-tag prediction score0.9171
Overlapped with the annotated transcript (%) 100
New Transcript ID TraesCS7B02G186900.1x
Reference Transcript ID TraesCS7B02G186900.1
Gene ID TraesCS7B02G186900
Gene Name ANTL1A
Transcript ID TraesCS7B02G186900.1
Protein ID
Gene ID TraesCS7B02G186900
Gene Name
Pfam domain motif AP2
Motif E-value 9.70E-10
Motif start 84
Motif end 142
Protein seq >TraesCS7B02G186900.1
MATTVQPHSPDPTAITTTPAPPPPPSPPRQENPTAAGEGVEIAALDEQPAAVAVAVADKGKTAPGGGKLVAEAMRKCAAP
RSSCYHGVTRLKWSGKYEAHLWDNTSQVEGRKRKGKHVYLGSYVTEENAARAHDLAALKYWGITQPTKLNFNISDYAKEI
EIMKSMNQDEFVAYIRRQSSCFSRGTSSYRGVTRRKDGKWQARIGRIGESRDTKDIYLGTFETEVEAAEAYDLAAIQLRG
VHAVTNFDISNYSEEGLKKLEGSSEVVNLEDQSEVTKLAVTNLDISKHCEDGLKKLDGASQVVNLESQSEVTKLSVTNFD
ISNCCEDGLKKLEGSSEVANLEDQSEVTKLAGQ*
CDS seq >TraesCS7B02G186900.1
ATGGCCACCACCGTCCAACCCCACTCCCCGGACCCAACAGCCATCACCACCACCCCTGCCCCTCCCCCTCCTCCTTCTCC
ACCTCGCCAGGAGAACCCGACCGCCGCGGGGGAAGGCGTAGAGATCGCGGCGCTCGATGAGCAGCCTGCCGCCGTCGCCG
TCGCCGTCGCCGACAAGGGGAAGACGGCCCCCGGCGGCGGGAAGCTGGTGGCAGAGGCCATGCGCAAGTGTGCGGCGCCC
CGGTCGTCGTGCTACCACGGCGTGACGAGGCTCAAGTGGAGCGGCAAGTACGAGGCACACCTCTGGGACAACACCAGCCA
GGTTGAGGGGCGCAAGCGCAAGGGCAAGCATGTGTACTTGGGAAGCTATGTTACTGAAGAGAATGCTGCAAGGGCACATG
ACCTTGCAGCCCTGAAATATTGGGGCATAACTCAACCCACCAAACTAAACTTCAATATTTCTGATTATGCAAAAGAAATT
GAGATCATGAAGAGCATGAATCAAGATGAATTTGTGGCCTACATAAGGAGGCAGAGTAGTTGTTTCTCAAGAGGAACATC
GTCATACAGGGGTGTAACAAGACGAAAGGATGGTAAATGGCAAGCACGTATTGGTAGGATTGGTGAGAGTAGGGACACTA
AAGACATCTATCTTGGGACCTTTGAAACTGAAGTGGAGGCAGCTGAAGCGTATGACCTAGCAGCAATTCAGCTCCGTGGT
GTGCATGCTGTGACCAACTTTGATATCAGCAACTACTCCGAAGAAGGTTTGAAGAAACTAGAAGGCTCATCCGAGGTAGT
GAACCTGGAGGACCAATCAGAAGTCACTAAGTTAGCTGTGACCAACTTGGATATTAGCAAACACTGCGAAGATGGTTTAA
AGAAACTAGATGGCGCCTCCCAGGTAGTGAACCTGGAGAGCCAATCAGAAGTCACCAAGTTATCTGTGACTAACTTTGAT
ATTAGCAACTGCTGTGAAGATGGTTTGAAGAAACTAGAAGGCTCATCCGAGGTAGCGAACCTGGAGGACCAATCAGAAGT
CACAAAGTTAGCTGGACAATAG
Ta_7B:312442635-312442643:- does not have available information here.