
Microexon ID | Ta_6A:432255585-432255593:- |
Species | Triticum Aestivum | Coordinates | 6A:432255585..432255593 |
Microexon Cluster ID | MEP21 |
Size | 9 |
Phase | 1 |
Pfam Domain Motif | AP2 |
Structure of Microexon-tag (flanking exon, microexon, flanking exon sizes) | 49,9,50 |
Microexon location in the Microexon-tag | 2 |
Microexon-tag DNA Seq | TGGGAYAAYAGYWSYWGRARWGARRGYCARAVYARGAARGGAARRCAAGTTTAYYTRGGKGSWTATGAYRAKGARGARRMWGCWGCWMGRGCWTATGAYYTDGCWGCW |
Logo of Microexon-tag DNA Seq | ![]() |
Alignment of exons | ![]() |
Microexon DNA seq | TTTATCTGG |
Microexon Amino Acid seq | VYLG |
Microexon-tag DNA Seq | TGGGACAATAGCTGCAGAAGAGAAGGGCAGAGTCGCAAGGGTAGGCAAGTTTATCTGGGTGGCTATGACAAGGAGGACAAGGCAGCAAGGGCTTATGATTTGGCAGCA |
Microexon-tag Amino Acid Seq | WDNSCRREGQSRKGRQVYLGGYDKEDKAARAYDLAA |
Microexon-tag spanning region | 432255445-432255807 |
Microexon-tag prediction score | 0.9713 |
Overlapped with the annotated transcript (%) | 100 |
New Transcript ID | TraesCS6A02G229500.1x |
Reference Transcript ID | TraesCS6A02G229500.1 |
Gene ID | TraesCS6A02G229500 |
Gene Name | NA |
Transcript ID | TraesCS6A02G229500.1 |
Protein ID | |
Gene ID | TraesCS6A02G229500 |
Gene Name | |
Pfam domain motif | AP2 |
Motif E-value | 3.30E-10 |
Motif start | 282 |
Motif end | 339 |
Protein seq | >TraesCS6A02G229500.1 MASGNDWLGFSLSGQENPQPHQDSSPPADIDIAGASGFYGLPTQPAPDAQLGVPGHHQPSYGITEAFNRGAHEIHDWNMR GDLDYNGGASELSMLVGSSAVGGKRAAMEAETEPKLEDFLVGNSFVSEQDQAGGFLFSGVPMATSTNSNSRSNTMELSMI KSWLRDNQVPQAPHPQSQTGAPAQQPQPHEEMGTDASSFDPLGRNGALVVAGSSQSLALSMSTGSGSHLPMAVLGGSPSG GVSESTSSENKRASGAMDSPGGAVEAVARKSIDTFGQRTSIYRGVTRHRWTGRYEAHLWDNSCRREGQSRKGRQVYLGGY DKEDKAARAYDLAALKYWGTTTTTNFPINTYEKEVDEMKHMTRQEYIAYLRRNSSGFSRGASKYRGVTRHHQHGRWQARI GRVAGNKDLYLGTFSTEEEAAEAYDIAAIKFRGLNAVTNFDMSRYDVKTILESSTLPVGGAARRPKEVADHPEAGATIWR AGMDGGVISQLTDVGMGTYASYHHGWPTIAFQQPSPLSVHYPYVAQPSRGWCKPEQDASVATQSLQDLQQLHLGTAAHNY FQASSSSTVYNGGGYQQGTSGNAFLMPASTVVDEQGHSSTATNQGSTCSYGDEEGKLNLGYDAMAMASTGADPYAAAPTV SIARANGYSNNWSSPFNGM* |
CDS seq | >TraesCS6A02G229500.1 ATGGCTTCTGGGAACGACTGGTTGGGGTTCTCGCTCTCCGGCCAAGAGAACCCACAGCCGCATCAGGATAGCTCGCCGCC CGCCGACATCGACATCGCTGGCGCCAGTGGCTTCTATGGCCTACCCACGCAGCCAGCTCCCGACGCTCAACTCGGTGTGC CAGGTCATCATCAGCCTTCATACGGGATCACGGAGGCCTTCAATAGGGGAGCTCATGAAATCCACGATTGGAACATGAGG GGTGATCTGGACTACAACGGCGGTGCGTCCGAGCTCTCGATGCTCGTCGGGTCGAGCGCAGTTGGCGGCAAGAGGGCGGC CATGGAGGCCGAGACCGAGCCCAAGCTTGAGGACTTCCTCGTTGGCAACTCGTTCGTCTCCGAGCAAGATCAGGCCGGTG GCTTCTTGTTCTCCGGTGTCCCGATGGCGACCAGCACCAACAGCAACAGCAGGAGCAACACCATGGAGCTCTCTATGATC AAGAGCTGGCTCCGTGACAACCAGGTACCCCAAGCGCCGCACCCGCAGTCGCAGACCGGGGCGCCCGCGCAGCAGCCGCA ACCCCACGAGGAGATGGGCACCGACGCGAGCAGCTTCGATCCGCTGGGGAGAAACGGCGCGTTGGTGGTGGCGGGGAGCT CGCAGAGCCTGGCGCTCTCGATGAGCACGGGCTCAGGATCGCACTTGCCGATGGCTGTGCTCGGCGGCAGTCCCAGTGGG GGAGTCTCAGAGAGCACCTCCTCGGAGAACAAGCGGGCCAGCGGCGCCATGGATTCGCCGGGCGGTGCGGTAGAAGCTGT CGCGAGGAAGTCCATCGACACATTCGGGCAAAGGACGTCGATATATCGAGGTGTAACAAGACATAGATGGACAGGGCGTT ATGAGGCTCATCTCTGGGACAATAGCTGCAGAAGAGAAGGGCAGAGTCGCAAGGGTAGGCAAGTTTATCTGGGTGGCTAT GACAAGGAGGACAAGGCAGCAAGGGCTTATGATTTGGCAGCACTCAAGTATTGGGGTACAACAACAACAACAAATTTCCC AATTAATACCTACGAAAAAGAGGTGGATGAAATGAAACATATGACTAGGCAGGAATACATCGCATACCTAAGAAGGAATA GCAGCGGATTTTCCCGTGGTGCGTCAAAATATCGTGGTGTAACTAGGCACCATCAGCATGGGAGATGGCAAGCAAGAATT GGGAGGGTTGCAGGAAACAAGGATCTCTACTTAGGCACCTTCAGCACCGAGGAGGAGGCGGCGGAGGCCTACGACATCGC GGCGATCAAGTTCCGTGGGCTGAACGCCGTCACCAACTTCGACATGAGTCGCTACGACGTCAAGACCATCCTCGAGAGCA GCACCCTGCCGGTGGGTGGCGCGGCGAGGCGCCCCAAGGAGGTCGCTGATCATCCAGAGGCTGGCGCCACGATCTGGCGG GCCGGCATGGACGGCGGCGTCATCTCCCAGCTGACCGACGTCGGGATGGGCACGTACGCGTCGTACCACCACGGCTGGCC AACCATCGCATTCCAGCAGCCCTCGCCGCTGTCGGTGCACTACCCATACGTCGCCCAGCCGTCTCGCGGGTGGTGCAAGC CCGAGCAGGACGCCAGCGTCGCCACGCAAAGCCTGCAGGACCTCCAGCAGCTGCACCTCGGGACCGCCGCTCACAACTAT TTCCAGGCATCGTCGAGCTCCACGGTCTACAACGGCGGCGGGTACCAGCAAGGCACCAGTGGCAACGCCTTCTTGATGCC GGCTAGCACCGTGGTGGATGAACAGGGGCACAGCAGCACTGCCACCAACCAGGGAAGCACATGCAGCTACGGGGACGAAG AGGGGAAGCTCAATCTCGGGTACGATGCCATGGCGATGGCGAGCACCGGCGCCGACCCATACGCGGCGGCGCCAACTGTG AGCATTGCGAGGGCGAACGGGTACTCCAACAACTGGAGCTCGCCGTTCAATGGCATGTGA |
Ta_6A:432255585-432255593:- does not have available information here.