Microexon ID Ta_6A:432255585-432255593:-
Species Triticum   Aestivum
Coordinates 6A:432255585..432255593
Microexon Cluster ID MEP21
Size 9
Phase 1
Pfam Domain Motif AP2
Structure of Microexon-tag (flanking exon, microexon, flanking exon sizes) 49,9,50
Microexon location in the Microexon-tag 2
Microexon-tag DNA Seq TGGGAYAAYAGYWSYWGRARWGARRGYCARAVYARGAARGGAARRCAAGTTTAYYTRGGKGSWTATGAYRAKGARGARRMWGCWGCWMGRGCWTATGAYYTDGCWGCW
Logo of Microexon-tag DNA Seq NT60 Logo
Alignment of exons MSA
Microexon DNA seq TTTATCTGG
Microexon Amino Acid seq VYLG
Microexon-tag DNA Seq TGGGACAATAGCTGCAGAAGAGAAGGGCAGAGTCGCAAGGGTAGGCAAGTTTATCTGGGTGGCTATGACAAGGAGGACAAGGCAGCAAGGGCTTATGATTTGGCAGCA
Microexon-tag Amino Acid Seq WDNSCRREGQSRKGRQVYLGGYDKEDKAARAYDLAA
Microexon-tag spanning region432255445-432255807
Microexon-tag prediction score0.9713
Overlapped with the annotated transcript (%) 100
New Transcript ID TraesCS6A02G229500.1x
Reference Transcript ID TraesCS6A02G229500.1
Gene ID TraesCS6A02G229500
Gene Name NA
Transcript ID TraesCS6A02G229500.1
Protein ID
Gene ID TraesCS6A02G229500
Gene Name
Pfam domain motif AP2
Motif E-value 3.30E-10
Motif start 282
Motif end 339
Protein seq >TraesCS6A02G229500.1
MASGNDWLGFSLSGQENPQPHQDSSPPADIDIAGASGFYGLPTQPAPDAQLGVPGHHQPSYGITEAFNRGAHEIHDWNMR
GDLDYNGGASELSMLVGSSAVGGKRAAMEAETEPKLEDFLVGNSFVSEQDQAGGFLFSGVPMATSTNSNSRSNTMELSMI
KSWLRDNQVPQAPHPQSQTGAPAQQPQPHEEMGTDASSFDPLGRNGALVVAGSSQSLALSMSTGSGSHLPMAVLGGSPSG
GVSESTSSENKRASGAMDSPGGAVEAVARKSIDTFGQRTSIYRGVTRHRWTGRYEAHLWDNSCRREGQSRKGRQVYLGGY
DKEDKAARAYDLAALKYWGTTTTTNFPINTYEKEVDEMKHMTRQEYIAYLRRNSSGFSRGASKYRGVTRHHQHGRWQARI
GRVAGNKDLYLGTFSTEEEAAEAYDIAAIKFRGLNAVTNFDMSRYDVKTILESSTLPVGGAARRPKEVADHPEAGATIWR
AGMDGGVISQLTDVGMGTYASYHHGWPTIAFQQPSPLSVHYPYVAQPSRGWCKPEQDASVATQSLQDLQQLHLGTAAHNY
FQASSSSTVYNGGGYQQGTSGNAFLMPASTVVDEQGHSSTATNQGSTCSYGDEEGKLNLGYDAMAMASTGADPYAAAPTV
SIARANGYSNNWSSPFNGM*
CDS seq >TraesCS6A02G229500.1
ATGGCTTCTGGGAACGACTGGTTGGGGTTCTCGCTCTCCGGCCAAGAGAACCCACAGCCGCATCAGGATAGCTCGCCGCC
CGCCGACATCGACATCGCTGGCGCCAGTGGCTTCTATGGCCTACCCACGCAGCCAGCTCCCGACGCTCAACTCGGTGTGC
CAGGTCATCATCAGCCTTCATACGGGATCACGGAGGCCTTCAATAGGGGAGCTCATGAAATCCACGATTGGAACATGAGG
GGTGATCTGGACTACAACGGCGGTGCGTCCGAGCTCTCGATGCTCGTCGGGTCGAGCGCAGTTGGCGGCAAGAGGGCGGC
CATGGAGGCCGAGACCGAGCCCAAGCTTGAGGACTTCCTCGTTGGCAACTCGTTCGTCTCCGAGCAAGATCAGGCCGGTG
GCTTCTTGTTCTCCGGTGTCCCGATGGCGACCAGCACCAACAGCAACAGCAGGAGCAACACCATGGAGCTCTCTATGATC
AAGAGCTGGCTCCGTGACAACCAGGTACCCCAAGCGCCGCACCCGCAGTCGCAGACCGGGGCGCCCGCGCAGCAGCCGCA
ACCCCACGAGGAGATGGGCACCGACGCGAGCAGCTTCGATCCGCTGGGGAGAAACGGCGCGTTGGTGGTGGCGGGGAGCT
CGCAGAGCCTGGCGCTCTCGATGAGCACGGGCTCAGGATCGCACTTGCCGATGGCTGTGCTCGGCGGCAGTCCCAGTGGG
GGAGTCTCAGAGAGCACCTCCTCGGAGAACAAGCGGGCCAGCGGCGCCATGGATTCGCCGGGCGGTGCGGTAGAAGCTGT
CGCGAGGAAGTCCATCGACACATTCGGGCAAAGGACGTCGATATATCGAGGTGTAACAAGACATAGATGGACAGGGCGTT
ATGAGGCTCATCTCTGGGACAATAGCTGCAGAAGAGAAGGGCAGAGTCGCAAGGGTAGGCAAGTTTATCTGGGTGGCTAT
GACAAGGAGGACAAGGCAGCAAGGGCTTATGATTTGGCAGCACTCAAGTATTGGGGTACAACAACAACAACAAATTTCCC
AATTAATACCTACGAAAAAGAGGTGGATGAAATGAAACATATGACTAGGCAGGAATACATCGCATACCTAAGAAGGAATA
GCAGCGGATTTTCCCGTGGTGCGTCAAAATATCGTGGTGTAACTAGGCACCATCAGCATGGGAGATGGCAAGCAAGAATT
GGGAGGGTTGCAGGAAACAAGGATCTCTACTTAGGCACCTTCAGCACCGAGGAGGAGGCGGCGGAGGCCTACGACATCGC
GGCGATCAAGTTCCGTGGGCTGAACGCCGTCACCAACTTCGACATGAGTCGCTACGACGTCAAGACCATCCTCGAGAGCA
GCACCCTGCCGGTGGGTGGCGCGGCGAGGCGCCCCAAGGAGGTCGCTGATCATCCAGAGGCTGGCGCCACGATCTGGCGG
GCCGGCATGGACGGCGGCGTCATCTCCCAGCTGACCGACGTCGGGATGGGCACGTACGCGTCGTACCACCACGGCTGGCC
AACCATCGCATTCCAGCAGCCCTCGCCGCTGTCGGTGCACTACCCATACGTCGCCCAGCCGTCTCGCGGGTGGTGCAAGC
CCGAGCAGGACGCCAGCGTCGCCACGCAAAGCCTGCAGGACCTCCAGCAGCTGCACCTCGGGACCGCCGCTCACAACTAT
TTCCAGGCATCGTCGAGCTCCACGGTCTACAACGGCGGCGGGTACCAGCAAGGCACCAGTGGCAACGCCTTCTTGATGCC
GGCTAGCACCGTGGTGGATGAACAGGGGCACAGCAGCACTGCCACCAACCAGGGAAGCACATGCAGCTACGGGGACGAAG
AGGGGAAGCTCAATCTCGGGTACGATGCCATGGCGATGGCGAGCACCGGCGCCGACCCATACGCGGCGGCGCCAACTGTG
AGCATTGCGAGGGCGAACGGGTACTCCAACAACTGGAGCTCGCCGTTCAATGGCATGTGA
Ta_6A:432255585-432255593:- does not have available information here.