
Microexon ID | Ta_5B:585474358-585474366:+ |
Species | Triticum Aestivum | Coordinates | 5B:585474358..585474366 |
Microexon Cluster ID | MEP21 |
Size | 9 |
Phase | 1 |
Pfam Domain Motif | AP2 |
Structure of Microexon-tag (flanking exon, microexon, flanking exon sizes) | 49,9,50 |
Microexon location in the Microexon-tag | 2 |
Microexon-tag DNA Seq | TGGGAYAAYAGYWSYWGRARWGARRGYCARAVYARGAARGGAARRCAAGTTTAYYTRGGKGSWTATGAYRAKGARGARRMWGCWGCWMGRGCWTATGAYYTDGCWGCW |
Logo of Microexon-tag DNA Seq | ![]() |
Alignment of exons | ![]() |
Microexon DNA seq | TTTATCTTG |
Microexon Amino Acid seq | VYLG |
Microexon-tag DNA Seq | TGGGACAACAGCTGCCGGAAGGAAGGCCAGACCAGGAAAGGCCGGCAAGTTTATCTTGGTGGGTATGACATGGAGGAGAAGGCGGCGAGGGCGTATGACCTGGCGGCG |
Microexon-tag Amino Acid Seq | WDNSCRKEGQTRKGRQVYLGGYDMEEKAARAYDLAA |
Microexon-tag spanning region | 585474088-585474567 |
Microexon-tag prediction score | 0.9678 |
Overlapped with the annotated transcript (%) | 100 |
New Transcript ID | TraesCS5B02G410200.1x |
Reference Transcript ID | TraesCS5B02G410200.1 |
Gene ID | TraesCS5B02G410200 |
Gene Name | NA |
Transcript ID | TraesCS5B02G410200.1 |
Protein ID | |
Gene ID | TraesCS5B02G410200 |
Gene Name | |
Pfam domain motif | AP2 |
Motif E-value | 7.60E-12 |
Motif start | 297 |
Motif end | 356 |
Protein seq | >TraesCS5B02G410200.1 MTNGGHSMSGASIAGGAGGWLGFSLSPHVAMDAAAGSGIVDMAGHHHAHHGGVYYHPDAVASSPMSFYFGGGDNVSAASG GYYSGISALPLRSDGSLCLADALRRSEQKHHGAEVSAPPKLEDFLGASPAMALTLDNSGYYYGGQGHGHGDAGEGQHQLP SAMMPGSGGHHMYYDAHAALLDEQAAATSAAMEAAGWMARAGDVYEVDGGNGEDGGGAIVTAGHDNPGGYVHPLTLSMSS GSQSSCVTMQQSAAQAHAYVGQATAASKKRGAGAGAGQNKQPVVHRKCIDTFGQRTSKYRGVTRHRWTGRYEAHLWDNSC RKEGQTRKGRQVYLGGYDMEEKAARAYDLAALKYWGASTHINFPVEDYQEELEVMKNMTRQEYVAHLRRKSSGFSRGASM YRGVTRHHQQGRWQARIGRVSGNKDLYLGTFSAEADAAEAYDVAAIKFRGLNAVTNFDINRYDVDKIMESSTLLPGDQVR RRKDGPDDSAAVVASAAAALVQAGSATDYWRQPAAVTTDEHSRHHLGLLSSESFSLLRGVVSVDGDAAGAQQGQGNRMSG ASSLATSLSNSREQSPDQGGGLAMLFARPAAPKLASSLPMGTWVSSPAPARPGVSVAHMPMFAAWADA* |
CDS seq | >TraesCS5B02G410200.1 ATGACCAACGGCGGCCACAGCATGAGCGGGGCCAGCATCGCGGGCGGTGCTGGCGGCTGGCTGGGTTTCTCGCTGTCGCC TCACGTGGCCATGGACGCGGCCGCCGGCTCCGGCATCGTCGACATGGCCGGCCACCACCACGCGCACCACGGCGGGGTCT ACTATCACCCTGACGCGGTCGCCTCCTCCCCCATGTCCTTCTACTTCGGCGGCGGCGACAATGTCAGCGCTGCGAGCGGC GGGTACTACTCCGGGATCTCCGCCCTGCCTCTCAGGTCCGACGGCTCCCTCTGCCTCGCCGACGCGCTCCGGAGGAGCGA GCAGAAACACCACGGGGCGGAGGTGTCGGCGCCGCCGAAGCTCGAGGACTTCCTGGGCGCGAGCCCCGCCATGGCGCTGA CCCTGGACAACTCCGGCTACTACTACGGCGGCCAAGGCCACGGCCATGGCGACGCTGGAGAGGGCCAGCACCAGCTGCCG TCCGCCATGATGCCTGGCTCCGGTGGCCACCACATGTACTACGACGCCCACGCGGCGTTGCTGGACGAGCAGGCTGCAGC CACGTCGGCCGCGATGGAAGCGGCCGGCTGGATGGCGCGTGCCGGAGACGTCTACGAGGTGGACGGCGGCAACGGCGAGG ACGGCGGGGGCGCCATCGTGACGGCCGGCCACGACAACCCCGGTGGGTACGTACACCCGCTGACGCTGTCCATGAGCTCC GGGTCCCAGTCCAGCTGCGTGACAATGCAGCAGTCGGCTGCACAGGCCCACGCCTACGTCGGCCAGGCGACCGCGGCCAG CAAGAAGCGCGGCGCCGGCGCCGGCGCCGGGCAGAACAAGCAGCCGGTCGTGCACCGCAAGTGCATCGACACCTTCGGCC AGCGAACGTCCAAGTACAGGGGCGTCACCAGGCATAGGTGGACGGGGAGGTATGAGGCGCACCTCTGGGACAACAGCTGC CGGAAGGAAGGCCAGACCAGGAAAGGCCGGCAAGTTTATCTTGGTGGGTATGACATGGAGGAGAAGGCGGCGAGGGCGTA TGACCTGGCGGCGCTCAAGTACTGGGGCGCGTCCACGCACATCAACTTCCCGGTGGAGGACTACCAGGAGGAGCTGGAGG TGATGAAGAACATGACCAGGCAGGAGTACGTGGCTCACCTCAGAAGGAAGAGCAGCGGGTTCTCGCGCGGCGCTTCGATG TACCGGGGAGTCACCAGGCACCACCAGCAGGGGCGGTGGCAGGCGCGCATCGGCCGCGTCTCCGGCAACAAGGACCTCTA CCTCGGCACATTCAGCGCGGAGGCGGACGCGGCGGAGGCCTACGACGTGGCGGCGATCAAGTTCCGCGGCCTCAACGCGG TCACCAACTTCGACATCAACCGGTACGACGTGGACAAGATCATGGAGAGCAGCACGCTCCTGCCCGGCGACCAGGTGCGG CGCAGGAAGGACGGCCCCGACGATAGCGCCGCCGTGGTGGCCAGCGCGGCGGCCGCCCTCGTGCAGGCCGGCAGCGCCAC GGACTACTGGAGGCAGCCTGCGGCGGTGACCACGGACGAGCACAGCCGCCACCACCTGGGCCTTCTGTCGAGTGAGTCCT TCTCCCTGCTGCGCGGCGTGGTGTCCGTGGACGGCGACGCCGCTGGTGCTCAGCAGGGGCAGGGCAACCGCATGTCGGGC GCGTCGTCCCTGGCCACGAGCCTGAGCAACTCCCGGGAGCAGAGCCCGGACCAGGGAGGCGGCCTGGCCATGCTGTTCGC CCGGCCCGCGGCGCCGAAGCTGGCGAGCTCGCTGCCCATGGGCACCTGGGTCTCATCGCCGGCGCCGGCCAGGCCCGGCG TGTCCGTGGCGCACATGCCAATGTTCGCCGCGTGGGCCGACGCCTGA |
Ta_5B:585474358-585474366:+ does not have available information here.