
Microexon ID | Ta_4B:493528935-493528943:+ |
Species | Triticum Aestivum | Coordinates | 4B:493528935..493528943 |
Microexon Cluster ID | MEP21 |
Size | 9 |
Phase | 1 |
Pfam Domain Motif | AP2 |
Structure of Microexon-tag (flanking exon, microexon, flanking exon sizes) | 49,9,50 |
Microexon location in the Microexon-tag | 2 |
Microexon-tag DNA Seq | TGGGAYAAYAGYWSYWGRARWGARRGYCARAVYARGAARGGAARRCAAGTTTAYYTRGGKGSWTATGAYRAKGARGARRMWGCWGCWMGRGCWTATGAYYTDGCWGCW |
Logo of Microexon-tag DNA Seq | ![]() |
Alignment of exons | ![]() |
Microexon DNA seq | TTTATCTAG |
Microexon Amino Acid seq | VYLG |
Microexon-tag DNA Seq | TGGGACAACAGTTGCAAGAAGGATGGGCAGACAAGGAAAGGGAGGCAAGTTTATCTAGGTGGTTATGATAATGAAGACAAGGCTGCCAGGGCTTATGATCTGGCTGCT |
Microexon-tag Amino Acid Seq | WDNSCKKDGQTRKGRQVYLGGYDNEDKAARAYDLAA |
Microexon-tag spanning region | 493528744-493529083 |
Microexon-tag prediction score | 0.9779 |
Overlapped with the annotated transcript (%) | 100 |
New Transcript ID | TraesCS4B02G235900.1x |
Reference Transcript ID | TraesCS4B02G235900.1 |
Gene ID | TraesCS4B02G235900 |
Gene Name | WANT1 |
Transcript ID | TraesCS4B02G235900.1 |
Protein ID | |
Gene ID | TraesCS4B02G235900 |
Gene Name | |
Pfam domain motif | AP2 |
Motif E-value | 3.50E-11 |
Motif start | 285 |
Motif end | 343 |
Protein seq | >TraesCS4B02G235900.1 MRAMASGGGNWLGFSLSPHMAMEVPSSEPDHAQAQPASASAMSASPTNAATCNLLFSQPAQMAAPPPGYYYVGGAYGDGT STAGVYYSHHSVMPITSDGSLCIMEGMMPSSSPKLEDFLGGGNGSGHDAVTYYSHHQQQQDQQDQEASRIYQHHQQQLAP YNFQHLTETEAIYQETTAPMDEAMAAAKNLLVTSYGSCYSNAGMQPLSLSMSPRSQSSSCVTAAPQQHQMAAAAAAAAAS MAASQGGSNGGGEQCVGKKRGTGKGGQKQPVHRKSIDTFGQRTSQYRGVTRHRWTGRYEAHLWDNSCKKDGQTRKGRQVY LGGYDNEDKAARAYDLAALKYWGPSTNTNFPLENYREEVEEMKSMTRQEFVAHLRRRSSGFSRGASIYRGVTRHHQHGRW QARIGRVAGNKDLYLGTFTTQEEAAEAYDVAAIKFRGLNAVTNFDITRYDVDKIMESSSLLPGDEARKVRPIEAANHVPS MHNGGGELSHAEEGSSGVWRMVLHGTPQQAAQCTPEVADLQKGFMDGDPRSSLHGNGIAGFDVESAAHDIDVSGKINYSN SSSLVTSLSNSREGSPERFSLPSLYAKHPNAVSLATMSPWMAMPAPTATHALRGPNSSIPPMPVFAAWTDA* |
CDS seq | >TraesCS4B02G235900.1 ATGAGAGCGATGGCCAGCGGCGGCGGCAACTGGTTAGGTTTCTCCCTCTCCCCGCACATGGCCATGGAGGTGCCCTCCTC TGAACCCGACCACGCTCAGGCTCAACCTGCTAGCGCTAGCGCTATGTCCGCTTCTCCCACAAACGCCGCGACCTGCAACC TCCTATTCTCCCAACCCGCGCAAATGGCCGCTCCACCTCCTGGCTACTACTACGTCGGCGGCGCCTATGGGGATGGCACC AGCACCGCCGGCGTCTACTACTCCCACCACTCCGTCATGCCCATCACGTCCGATGGATCCCTGTGCATCATGGAAGGGAT GATGCCATCGTCCTCGCCGAAGCTCGAGGACTTCTTGGGTGGCGGCAATGGAAGTGGGCACGACGCGGTCACCTACTACA GCCACCACCAGCAGCAGCAGGACCAACAGGACCAGGAGGCAAGCAGAATCTACCAGCACCATCAGCAGCAGCTAGCGCCC TACAACTTCCAGCACTTGACGGAAACGGAGGCGATCTACCAAGAGACCACGGCGCCGATGGATGAGGCAATGGCCGCTGC CAAGAACCTGCTCGTGACGAGCTATGGCTCATGCTACAGCAACGCGGGGATGCAGCCGCTGAGCCTGTCCATGAGCCCCA GGTCCCAGTCCAGCAGCTGCGTCACCGCAGCTCCTCAGCAGCATCAGATGGCTGCGGCTGCTGCTGCTGCTGCTGCCTCT ATGGCTGCTTCCCAGGGAGGCAGTAATGGTGGTGGGGAGCAGTGCGTGGGGAAGAAGAGGGGCACTGGGAAGGGAGGCCA GAAGCAGCCCGTTCACCGCAAGTCCATCGACACGTTTGGGCAGAGGACCTCCCAGTATAGGGGCGTCACCAGGCACAGGT GGACTGGGAGATATGAAGCCCACCTGTGGGACAACAGTTGCAAGAAGGATGGGCAGACAAGGAAAGGGAGGCAAGTTTAT CTAGGTGGTTATGATAATGAAGACAAGGCTGCCAGGGCTTATGATCTGGCTGCTCTGAAATACTGGGGGCCGTCGACGAA CACCAATTTCCCGCTAGAAAATTATCGAGAGGAGGTCGAGGAGATGAAAAGCATGACAAGGCAGGAATTCGTTGCACACT TGAGAAGGAGAAGCAGCGGGTTTTCTCGTGGTGCTTCGATATATCGAGGAGTAACGAGGCATCATCAGCATGGAAGATGG CAAGCTAGGATTGGCAGGGTTGCTGGCAACAAAGACTTGTATCTCGGCACTTTCACCACTCAAGAAGAAGCAGCCGAGGC CTATGACGTAGCCGCGATCAAGTTCCGTGGCCTGAACGCCGTGACCAACTTCGACATAACCAGATACGACGTGGACAAGA TCATGGAGAGCAGCTCTCTGCTGCCCGGGGACGAAGCGCGCAAGGTCAGGCCGATCGAGGCGGCCAACCACGTGCCTTCC ATGCACAACGGCGGCGGGGAGCTCAGCCATGCCGAAGAAGGAAGCTCAGGCGTCTGGAGGATGGTGCTCCATGGAACACC GCAGCAAGCTGCACAGTGCACCCCCGAGGTGGCCGACCTTCAGAAGGGCTTCATGGACGGCGACCCTCGCTCGTCCCTGC ATGGCAATGGCATTGCCGGGTTCGACGTCGAGTCTGCCGCGCATGACATCGACGTTTCAGGCAAGATTAACTACTCCAAC TCGTCTTCCCTGGTGACCAGCCTCAGCAACTCGAGAGAGGGGAGCCCCGAGAGGTTCAGCCTGCCCTCGCTGTACGCCAA GCATCCCAACGCCGTCAGCCTCGCCACCATGAGCCCGTGGATGGCGATGCCGGCGCCGACCGCCACCCACGCGTTGAGGG GGCCGAATTCCTCCATCCCTCCCATGCCTGTGTTTGCTGCCTGGACAGACGCATAG |
Ta_4B:493528935-493528943:+ does not have available information here.