
Microexon ID | Ta_4B:395608173-395608181:+ |
Species | Triticum Aestivum | Coordinates | 4B:395608173..395608181 |
Microexon Cluster ID | MEP21 |
Size | 9 |
Phase | 1 |
Pfam Domain Motif | AP2 |
Structure of Microexon-tag (flanking exon, microexon, flanking exon sizes) | 49,9,50 |
Microexon location in the Microexon-tag | 2 |
Microexon-tag DNA Seq | TGGGAYAAYAGYWSYWGRARWGARRGYCARAVYARGAARGGAARRCAAGTTTAYYTRGGKGSWTATGAYRAKGARGARRMWGCWGCWMGRGCWTATGAYYTDGCWGCW |
Logo of Microexon-tag DNA Seq | ![]() |
Alignment of exons | ![]() |
Microexon DNA seq | TTTACTTGG |
Microexon Amino Acid seq | VYLG |
Microexon-tag DNA Seq | TGGGACAACACGTGCCGGCGGGAGGGTCAGAAACGCAAGGGACGCCAAGTTTACTTGGGTGGCTATGAAAAAGAAGATAGGGCTGCTAGGGCATATGATCTTGCTGCT |
Microexon-tag Amino Acid Seq | WDNTCRREGQKRKGRQVYLGGYEKEDRAARAYDLAA |
Microexon-tag spanning region | 395605557-395608328 |
Microexon-tag prediction score | 0.9421 |
Overlapped with the annotated transcript (%) | 100 |
New Transcript ID | TraesCS4B02G180600.1x |
Reference Transcript ID | TraesCS4B02G180600.1 |
Gene ID | TraesCS4B02G180600 |
Gene Name | NA |
Transcript ID | TraesCS4B02G180600.1 |
Protein ID | |
Gene ID | TraesCS4B02G180600 |
Gene Name | |
Pfam domain motif | AP2 |
Motif E-value | 1.50E-09 |
Motif start | 94 |
Motif end | 153 |
Protein seq | >TraesCS4B02G180600.1 MSPPTNGSASLPLTGLSDAVLFPFDGFSADDFFATAPPPPPPLGADPGRLLLESSRNDAHASTGLAVAAPVETTGSPSAL APLPLTPSSGQRTSCYRGVTRHRWTKRYEAHLWDNTCRREGQKRKGRQVYLGGYEKEDRAARAYDLAALKYWGVNATTNF PKENYIRELEEMQNMSRQELVASLRRKSSGFSRGASVYRGVTRHHQHGRWQARIGRVAGNKDLYLGTFATEEEAAEAYDI AALKFRGDNAVTNFEPSRYNLEAIARSDLPVNGRRMSSHKPAAAPAPEAQGEITFVSSALPIPQQSGSDVQVPPYVLHGL LQLQASEPLHALPLSSYSFGEPSFYWPFGDVEQKVQLDSKVEVAGGILQLANSAV* |
CDS seq | >TraesCS4B02G180600.1 ATGTCGCCGCCGACGAACGGCTCCGCCTCGCTTCCCTTGACGGGCCTGTCCGACGCGGTGCTCTTCCCGTTCGACGGCTT CTCCGCCGACGACTTCTTCGCCACCGCCCCGCCACCGCCTCCTCCTCTCGGCGCCGACCCGGGGCGCCTCCTCCTCGAGT CCTCCCGCAACGACGCCCACGCCTCCACGGGCCTGGCCGTCGCGGCGCCCGTGGAGACCACCGGGAGCCCCTCCGCGCTG GCGCCGCTGCCGCTGACGCCGAGCTCCGGCCAAAGGACGTCGTGCTACCGCGGGGTGACCAGGCACCGGTGGACCAAGCG GTACGAGGCGCACCTGTGGGACAACACGTGCCGGCGGGAGGGTCAGAAACGCAAGGGACGCCAAGTTTACTTGGGTGGCT ATGAAAAAGAAGATAGGGCTGCTAGGGCATATGATCTTGCTGCTCTGAAATACTGGGGTGTCAATGCTACCACTAATTTC CCTAAAGAAAACTACATCAGAGAGCTTGAGGAGATGCAAAACATGAGCAGGCAGGAGCTTGTAGCTTCACTGAGGAGGAA GAGCAGTGGCTTCTCTAGGGGTGCATCCGTGTACAGAGGTGTCACAAGGCACCACCAACATGGACGCTGGCAGGCAAGAA TTGGTCGTGTTGCAGGCAACAAGGACTTGTACCTGGGGACTTTCGCGACGGAAGAAGAAGCGGCGGAGGCGTACGACATC GCAGCGCTCAAGTTCAGGGGCGACAACGCCGTCACCAACTTCGAGCCCAGCCGGTACAACCTGGAGGCGATTGCCCGCAG CGACCTTCCGGTCAACGGGAGGCGGATGAGCAGCCACAAGCCAGCAGCGGCGCCAGCACCAGAAGCGCAGGGCGAGATCA CCTTCGTGTCCTCCGCTCTTCCGATTCCGCAGCAGTCGGGCAGCGACGTGCAAGTGCCACCTTATGTCCTCCACGGTCTT CTGCAGCTCCAGGCCTCTGAGCCCCTGCATGCTCTCCCGCTTTCCAGCTACAGCTTCGGAGAGCCCAGCTTCTACTGGCC CTTCGGCGACGTGGAGCAGAAGGTGCAGCTTGACAGCAAGGTGGAAGTGGCTGGTGGCATCCTTCAGCTGGCCAACTCGG CCGTGTAG |
Ta_4B:395608173-395608181:+ does not have available information here.