Microexon ID Ta_4B:395608173-395608181:+
Species Triticum   Aestivum
Coordinates 4B:395608173..395608181
Microexon Cluster ID MEP21
Size 9
Phase 1
Pfam Domain Motif AP2
Structure of Microexon-tag (flanking exon, microexon, flanking exon sizes) 49,9,50
Microexon location in the Microexon-tag 2
Microexon-tag DNA Seq TGGGAYAAYAGYWSYWGRARWGARRGYCARAVYARGAARGGAARRCAAGTTTAYYTRGGKGSWTATGAYRAKGARGARRMWGCWGCWMGRGCWTATGAYYTDGCWGCW
Logo of Microexon-tag DNA Seq NT60 Logo
Alignment of exons MSA
Microexon DNA seq TTTACTTGG
Microexon Amino Acid seq VYLG
Microexon-tag DNA Seq TGGGACAACACGTGCCGGCGGGAGGGTCAGAAACGCAAGGGACGCCAAGTTTACTTGGGTGGCTATGAAAAAGAAGATAGGGCTGCTAGGGCATATGATCTTGCTGCT
Microexon-tag Amino Acid Seq WDNTCRREGQKRKGRQVYLGGYEKEDRAARAYDLAA
Microexon-tag spanning region395605557-395608328
Microexon-tag prediction score0.9421
Overlapped with the annotated transcript (%) 100
New Transcript ID TraesCS4B02G180600.1x
Reference Transcript ID TraesCS4B02G180600.1
Gene ID TraesCS4B02G180600
Gene Name NA
Transcript ID TraesCS4B02G180600.1
Protein ID
Gene ID TraesCS4B02G180600
Gene Name
Pfam domain motif AP2
Motif E-value 1.50E-09
Motif start 94
Motif end 153
Protein seq >TraesCS4B02G180600.1
MSPPTNGSASLPLTGLSDAVLFPFDGFSADDFFATAPPPPPPLGADPGRLLLESSRNDAHASTGLAVAAPVETTGSPSAL
APLPLTPSSGQRTSCYRGVTRHRWTKRYEAHLWDNTCRREGQKRKGRQVYLGGYEKEDRAARAYDLAALKYWGVNATTNF
PKENYIRELEEMQNMSRQELVASLRRKSSGFSRGASVYRGVTRHHQHGRWQARIGRVAGNKDLYLGTFATEEEAAEAYDI
AALKFRGDNAVTNFEPSRYNLEAIARSDLPVNGRRMSSHKPAAAPAPEAQGEITFVSSALPIPQQSGSDVQVPPYVLHGL
LQLQASEPLHALPLSSYSFGEPSFYWPFGDVEQKVQLDSKVEVAGGILQLANSAV*
CDS seq >TraesCS4B02G180600.1
ATGTCGCCGCCGACGAACGGCTCCGCCTCGCTTCCCTTGACGGGCCTGTCCGACGCGGTGCTCTTCCCGTTCGACGGCTT
CTCCGCCGACGACTTCTTCGCCACCGCCCCGCCACCGCCTCCTCCTCTCGGCGCCGACCCGGGGCGCCTCCTCCTCGAGT
CCTCCCGCAACGACGCCCACGCCTCCACGGGCCTGGCCGTCGCGGCGCCCGTGGAGACCACCGGGAGCCCCTCCGCGCTG
GCGCCGCTGCCGCTGACGCCGAGCTCCGGCCAAAGGACGTCGTGCTACCGCGGGGTGACCAGGCACCGGTGGACCAAGCG
GTACGAGGCGCACCTGTGGGACAACACGTGCCGGCGGGAGGGTCAGAAACGCAAGGGACGCCAAGTTTACTTGGGTGGCT
ATGAAAAAGAAGATAGGGCTGCTAGGGCATATGATCTTGCTGCTCTGAAATACTGGGGTGTCAATGCTACCACTAATTTC
CCTAAAGAAAACTACATCAGAGAGCTTGAGGAGATGCAAAACATGAGCAGGCAGGAGCTTGTAGCTTCACTGAGGAGGAA
GAGCAGTGGCTTCTCTAGGGGTGCATCCGTGTACAGAGGTGTCACAAGGCACCACCAACATGGACGCTGGCAGGCAAGAA
TTGGTCGTGTTGCAGGCAACAAGGACTTGTACCTGGGGACTTTCGCGACGGAAGAAGAAGCGGCGGAGGCGTACGACATC
GCAGCGCTCAAGTTCAGGGGCGACAACGCCGTCACCAACTTCGAGCCCAGCCGGTACAACCTGGAGGCGATTGCCCGCAG
CGACCTTCCGGTCAACGGGAGGCGGATGAGCAGCCACAAGCCAGCAGCGGCGCCAGCACCAGAAGCGCAGGGCGAGATCA
CCTTCGTGTCCTCCGCTCTTCCGATTCCGCAGCAGTCGGGCAGCGACGTGCAAGTGCCACCTTATGTCCTCCACGGTCTT
CTGCAGCTCCAGGCCTCTGAGCCCCTGCATGCTCTCCCGCTTTCCAGCTACAGCTTCGGAGAGCCCAGCTTCTACTGGCC
CTTCGGCGACGTGGAGCAGAAGGTGCAGCTTGACAGCAAGGTGGAAGTGGCTGGTGGCATCCTTCAGCTGGCCAACTCGG
CCGTGTAG
Ta_4B:395608173-395608181:+ does not have available information here.