Microexon ID Ta_4A:6636345-6636353:-
Species Triticum   Aestivum
Coordinates 4A:6636345..6636353
Microexon Cluster ID MEP21
Size 9
Phase 1
Pfam Domain Motif AP2
Structure of Microexon-tag (flanking exon, microexon, flanking exon sizes) 49,9,50
Microexon location in the Microexon-tag 2
Microexon-tag DNA Seq TGGGAYAAYAGYWSYWGRARWGARRGYCARAVYARGAARGGAARRCAAGTTTAYYTRGGKGSWTATGAYRAKGARGARRMWGCWGCWMGRGCWTATGAYYTDGCWGCW
Logo of Microexon-tag DNA Seq NT60 Logo
Alignment of exons MSA
Microexon DNA seq TTTACCTAG
Microexon Amino Acid seq VYLG
Microexon-tag DNA Seq TGGGACAACACCTGCAGGAAGGAAGGCCAGACCAGGAAAGGAAGGCAAGTTTACCTAGGTGGCTATGACAAGGAGGAGAAGGCCGCGAGGGCTTACGACCTGGCCGCG
Microexon-tag Amino Acid Seq WDNTCRKEGQTRKGRQVYLGGYDKEEKAARAYDLAA
Microexon-tag spanning region6636210-6636521
Microexon-tag prediction score0.9734
Overlapped with the annotated transcript (%) 100
New Transcript ID TraesCS4A02G011600.1x
Reference Transcript ID TraesCS4A02G011600.1
Gene ID TraesCS4A02G011600
Gene Name NA
Transcript ID TraesCS4A02G011600.1
Protein ID
Gene ID TraesCS4A02G011600
Gene Name
Pfam domain motif AP2
Motif E-value 1.20E-11
Motif start 255
Motif end 313
Protein seq >TraesCS4A02G011600.1
MDMTSGWLGFSLSSSSSAARGYDAGEGAGCDGGDGGSCSSPTAAAAPSSPIVGVPLHSGGGSVQYDGQDWRHQHAEAKGP
KLEDFLSVGYGNDRSSGSIYDASHADQLKYHHHQDVHHAYPGSPYFQGNGGGGVVIGLDINNAPPPSHCTGLPDHHFMPA
HHGQYSLCPPNQQAAGAGAMAAAPMYSSAAGFDGSANMSISGIKSWLRQSMYVPEQSTSAIPPSVHAAPSEPPLPAPCVP
VPRKLAQTFGQRTSQFRGVTRHRWTGRYEAHLWDNTCRKEGQTRKGRQVYLGGYDKEEKAARAYDLAALKYWGPATHINF
PLSTYEKELEEMKHMTRQEFIAHLRRNSSGFSRGASMYRGVTRHHQHGRWQARIGRVAGNKDLYLGTFSTQEEAAEAYDI
AAIKFRGLSAVTNFDISKYDVKRICASSHLIGGDLACRRSPTRDAPALPSGVSVAVERPEAGASDNSSDASDGHRGAHLL
HGLQYAHAMKYEAGEGSNGGGSWMAAAARPVAGVPSAHPLPVFALWND*
CDS seq >TraesCS4A02G011600.1
ATGGACATGACCAGCGGCTGGCTCGGCTTCTCCTTGTCTTCCTCCTCTTCCGCCGCCAGGGGCTACGACGCCGGCGAGGG
AGCGGGGTGCGATGGCGGTGACGGTGGCTCTTGCTCGTCGCCCACCGCGGCGGCGGCGCCTTCTTCGCCCATCGTGGGCG
TGCCGTTGCACTCTGGCGGCGGCTCTGTGCAGTACGATGGACAAGATTGGAGGCATCAGCATGCAGAAGCCAAAGGCCCC
AAGCTGGAGGACTTCCTGAGCGTCGGCTACGGCAACGACAGGAGCAGCGGCAGCATCTACGACGCCAGCCACGCCGACCA
GCTCAAGTACCACCACCACCAGGACGTCCACCACGCCTATCCAGGCTCGCCCTACTTCCAGGGCAATGGCGGTGGTGGCG
TCGTCATCGGGCTGGACATCAACAACGCGCCGCCGCCGTCACACTGCACCGGCCTCCCGGACCACCACTTCATGCCCGCG
CACCATGGCCAGTACTCGCTGTGCCCGCCGAACCAACAAGCTGCAGGCGCGGGCGCGATGGCGGCGGCGCCAATGTACAG
CTCCGCGGCGGGCTTCGACGGCAGCGCCAACATGTCCATCTCTGGCATCAAGTCCTGGCTCCGGCAGTCGATGTACGTGC
CCGAGCAGTCGACGTCGGCGATCCCCCCCTCCGTGCACGCCGCCCCGAGCGAGCCGCCGCTGCCGGCGCCGTGCGTCCCC
GTCCCTCGCAAGCTCGCGCAGACCTTCGGGCAGAGGACGTCGCAGTTCCGCGGCGTCACGAGGCACAGGTGGACGGGGAG
GTACGAGGCTCACCTGTGGGACAACACCTGCAGGAAGGAAGGCCAGACCAGGAAAGGAAGGCAAGTTTACCTAGGTGGCT
ATGACAAGGAGGAGAAGGCCGCGAGGGCTTACGACCTGGCCGCGCTCAAGTACTGGGGTCCGGCGACCCACATAAATTTC
CCGTTAAGCACCTATGAGAAGGAGCTGGAGGAGATGAAGCACATGACAAGGCAGGAGTTCATTGCGCACTTAAGAAGGAA
CAGCAGTGGGTTCTCGAGGGGAGCATCCATGTACAGAGGAGTGACCAGGCATCACCAGCACGGCAGATGGCAGGCCAGGA
TTGGGAGGGTGGCAGGGAACAAGGACCTGTACCTTGGCACCTTCAGTACGCAGGAGGAGGCGGCGGAGGCGTACGACATC
GCGGCGATCAAGTTCCGCGGGCTGAGCGCCGTCACCAACTTCGACATCAGCAAGTACGACGTGAAGCGCATCTGCGCCAG
CTCGCACCTCATCGGCGGGGACCTCGCCTGCAGGCGCTCCCCGACGCGCGACGCGCCGGCGCTGCCCAGCGGCGTGAGCG
TCGCCGTCGAGCGCCCCGAGGCCGGCGCGTCCGACAACAGCTCCGACGCCTCGGACGGCCACCGCGGCGCGCACCTGCTG
CACGGGCTCCAGTACGCGCACGCCATGAAGTACGAGGCCGGCGAGGGCAGCAACGGCGGCGGGAGCTGGATGGCCGCCGC
GGCGCGGCCGGTGGCCGGCGTCCCCAGCGCGCACCCGCTCCCGGTGTTCGCGCTCTGGAACGACTGA
Ta_4A:6636345-6636353:- does not have available information here.