
Microexon ID | Ta_4A:6636345-6636353:- |
Species | Triticum Aestivum | Coordinates | 4A:6636345..6636353 |
Microexon Cluster ID | MEP21 |
Size | 9 |
Phase | 1 |
Pfam Domain Motif | AP2 |
Structure of Microexon-tag (flanking exon, microexon, flanking exon sizes) | 49,9,50 |
Microexon location in the Microexon-tag | 2 |
Microexon-tag DNA Seq | TGGGAYAAYAGYWSYWGRARWGARRGYCARAVYARGAARGGAARRCAAGTTTAYYTRGGKGSWTATGAYRAKGARGARRMWGCWGCWMGRGCWTATGAYYTDGCWGCW |
Logo of Microexon-tag DNA Seq | ![]() |
Alignment of exons | ![]() |
Microexon DNA seq | TTTACCTAG |
Microexon Amino Acid seq | VYLG |
Microexon-tag DNA Seq | TGGGACAACACCTGCAGGAAGGAAGGCCAGACCAGGAAAGGAAGGCAAGTTTACCTAGGTGGCTATGACAAGGAGGAGAAGGCCGCGAGGGCTTACGACCTGGCCGCG |
Microexon-tag Amino Acid Seq | WDNTCRKEGQTRKGRQVYLGGYDKEEKAARAYDLAA |
Microexon-tag spanning region | 6636210-6636521 |
Microexon-tag prediction score | 0.9734 |
Overlapped with the annotated transcript (%) | 100 |
New Transcript ID | TraesCS4A02G011600.1x |
Reference Transcript ID | TraesCS4A02G011600.1 |
Gene ID | TraesCS4A02G011600 |
Gene Name | NA |
Transcript ID | TraesCS4A02G011600.1 |
Protein ID | |
Gene ID | TraesCS4A02G011600 |
Gene Name | |
Pfam domain motif | AP2 |
Motif E-value | 1.20E-11 |
Motif start | 255 |
Motif end | 313 |
Protein seq | >TraesCS4A02G011600.1 MDMTSGWLGFSLSSSSSAARGYDAGEGAGCDGGDGGSCSSPTAAAAPSSPIVGVPLHSGGGSVQYDGQDWRHQHAEAKGP KLEDFLSVGYGNDRSSGSIYDASHADQLKYHHHQDVHHAYPGSPYFQGNGGGGVVIGLDINNAPPPSHCTGLPDHHFMPA HHGQYSLCPPNQQAAGAGAMAAAPMYSSAAGFDGSANMSISGIKSWLRQSMYVPEQSTSAIPPSVHAAPSEPPLPAPCVP VPRKLAQTFGQRTSQFRGVTRHRWTGRYEAHLWDNTCRKEGQTRKGRQVYLGGYDKEEKAARAYDLAALKYWGPATHINF PLSTYEKELEEMKHMTRQEFIAHLRRNSSGFSRGASMYRGVTRHHQHGRWQARIGRVAGNKDLYLGTFSTQEEAAEAYDI AAIKFRGLSAVTNFDISKYDVKRICASSHLIGGDLACRRSPTRDAPALPSGVSVAVERPEAGASDNSSDASDGHRGAHLL HGLQYAHAMKYEAGEGSNGGGSWMAAAARPVAGVPSAHPLPVFALWND* |
CDS seq | >TraesCS4A02G011600.1 ATGGACATGACCAGCGGCTGGCTCGGCTTCTCCTTGTCTTCCTCCTCTTCCGCCGCCAGGGGCTACGACGCCGGCGAGGG AGCGGGGTGCGATGGCGGTGACGGTGGCTCTTGCTCGTCGCCCACCGCGGCGGCGGCGCCTTCTTCGCCCATCGTGGGCG TGCCGTTGCACTCTGGCGGCGGCTCTGTGCAGTACGATGGACAAGATTGGAGGCATCAGCATGCAGAAGCCAAAGGCCCC AAGCTGGAGGACTTCCTGAGCGTCGGCTACGGCAACGACAGGAGCAGCGGCAGCATCTACGACGCCAGCCACGCCGACCA GCTCAAGTACCACCACCACCAGGACGTCCACCACGCCTATCCAGGCTCGCCCTACTTCCAGGGCAATGGCGGTGGTGGCG TCGTCATCGGGCTGGACATCAACAACGCGCCGCCGCCGTCACACTGCACCGGCCTCCCGGACCACCACTTCATGCCCGCG CACCATGGCCAGTACTCGCTGTGCCCGCCGAACCAACAAGCTGCAGGCGCGGGCGCGATGGCGGCGGCGCCAATGTACAG CTCCGCGGCGGGCTTCGACGGCAGCGCCAACATGTCCATCTCTGGCATCAAGTCCTGGCTCCGGCAGTCGATGTACGTGC CCGAGCAGTCGACGTCGGCGATCCCCCCCTCCGTGCACGCCGCCCCGAGCGAGCCGCCGCTGCCGGCGCCGTGCGTCCCC GTCCCTCGCAAGCTCGCGCAGACCTTCGGGCAGAGGACGTCGCAGTTCCGCGGCGTCACGAGGCACAGGTGGACGGGGAG GTACGAGGCTCACCTGTGGGACAACACCTGCAGGAAGGAAGGCCAGACCAGGAAAGGAAGGCAAGTTTACCTAGGTGGCT ATGACAAGGAGGAGAAGGCCGCGAGGGCTTACGACCTGGCCGCGCTCAAGTACTGGGGTCCGGCGACCCACATAAATTTC CCGTTAAGCACCTATGAGAAGGAGCTGGAGGAGATGAAGCACATGACAAGGCAGGAGTTCATTGCGCACTTAAGAAGGAA CAGCAGTGGGTTCTCGAGGGGAGCATCCATGTACAGAGGAGTGACCAGGCATCACCAGCACGGCAGATGGCAGGCCAGGA TTGGGAGGGTGGCAGGGAACAAGGACCTGTACCTTGGCACCTTCAGTACGCAGGAGGAGGCGGCGGAGGCGTACGACATC GCGGCGATCAAGTTCCGCGGGCTGAGCGCCGTCACCAACTTCGACATCAGCAAGTACGACGTGAAGCGCATCTGCGCCAG CTCGCACCTCATCGGCGGGGACCTCGCCTGCAGGCGCTCCCCGACGCGCGACGCGCCGGCGCTGCCCAGCGGCGTGAGCG TCGCCGTCGAGCGCCCCGAGGCCGGCGCGTCCGACAACAGCTCCGACGCCTCGGACGGCCACCGCGGCGCGCACCTGCTG CACGGGCTCCAGTACGCGCACGCCATGAAGTACGAGGCCGGCGAGGGCAGCAACGGCGGCGGGAGCTGGATGGCCGCCGC GGCGCGGCCGGTGGCCGGCGTCCCCAGCGCGCACCCGCTCCCGGTGTTCGCGCTCTGGAACGACTGA |
Ta_4A:6636345-6636353:- does not have available information here.