Microexon ID Ta_4A:156137628-156137636:-
Species Triticum   Aestivum
Coordinates 4A:156137628..156137636
Microexon Cluster ID MEP21
Size 9
Phase 1
Pfam Domain Motif AP2
Structure of Microexon-tag (flanking exon, microexon, flanking exon sizes) 49,9,50
Microexon location in the Microexon-tag 2
Microexon-tag DNA Seq TGGGAYAAYAGYWSYWGRARWGARRGYCARAVYARGAARGGAARRCAAGTTTAYYTRGGKGSWTATGAYRAKGARGARRMWGCWGCWMGRGCWTATGAYYTDGCWGCW
Logo of Microexon-tag DNA Seq NT60 Logo
Alignment of exons MSA
Microexon DNA seq TTTACTTGG
Microexon Amino Acid seq VYLG
Microexon-tag DNA Seq TGGGACAACACGTGCCGCCGCGAGGGCCAGAAACGCAAGGGACGCCAAGTTTACTTGGGTGGCTATGAAAAAGAAGATAGGGCTGCTAGGGCATATGATCTTGCTGCT
Microexon-tag Amino Acid Seq WDNTCRREGQKRKGRQVYLGGYEKEDRAARAYDLAA
Microexon-tag spanning region156137481-156140220
Microexon-tag prediction score0.9363
Overlapped with the annotated transcript (%) 100
New Transcript ID TraesCS4A02G123800.1x
Reference Transcript ID TraesCS4A02G123800.1
Gene ID TraesCS4A02G123800
Gene Name NA
Transcript ID TraesCS4A02G123800.1
Protein ID
Gene ID TraesCS4A02G123800
Gene Name
Pfam domain motif AP2
Motif E-value 1.50E-09
Motif start 97
Motif end 156
Protein seq >TraesCS4A02G123800.1
MMSPPTNGSASLPVTDLSDAVLFPFDGFSADDFFATAPPPLPPTLGADPGRLLLASSRNDVHASTDLAVAAPVETTGSSS
ALAAALPLTPSSGQRTSCYRGVTRHRWTKRYEAHLWDNTCRREGQKRKGRQVYLGGYEKEDRAARAYDLAALKYWGVNAT
TNFPKENYIRELEEMQNMSRHELVASLRRKSSGFSRGASVYRGVTRHHQHGRWQARIGRVAGNKDLYLGTFATEEEAAEA
YDIAALKFRGDNAVTNFEPSRYNLEAIACSDLPVNGRRMSSHKPTAAAAPEAQGEITFVSSAPPIPQQSCSDVQVPPYVL
HGLLQLQASEPLHALPLSSYSFGEPSFYWPFGDVEQKVQLDSKVEVAGGILQLANSAV*
CDS seq >TraesCS4A02G123800.1
ATGATGTCGCCGCCGACGAACGGCTCCGCCTCGCTTCCCGTGACGGACCTGTCCGACGCGGTACTCTTCCCCTTCGACGG
CTTCTCCGCCGACGACTTCTTCGCCACCGCCCCGCCTCCGCTTCCTCCTACTCTCGGCGCCGACCCGGGGCGCCTCCTCC
TCGCGTCCTCCCGCAACGACGTCCACGCCTCCACGGACCTGGCCGTCGCGGCGCCCGTGGAGACCACCGGGAGCTCCTCC
GCGCTGGCCGCGGCGCTGCCACTGACGCCGAGCTCCGGCCAAAGGACGTCGTGCTACCGCGGGGTGACCAGGCACCGGTG
GACCAAACGGTACGAGGCGCACCTGTGGGACAACACGTGCCGCCGCGAGGGCCAGAAACGCAAGGGACGCCAAGTTTACT
TGGGTGGCTATGAAAAAGAAGATAGGGCTGCTAGGGCATATGATCTTGCTGCTCTGAAATACTGGGGTGTCAATGCTACT
ACTAATTTCCCTAAAGAAAACTACATCAGAGAGCTTGAGGAGATGCAAAACATGAGCAGGCACGAGCTTGTAGCTTCACT
GAGGAGGAAGAGCAGTGGCTTCTCTAGGGGTGCATCGGTGTACAGAGGTGTCACAAGGCACCACCAACATGGACGCTGGC
AGGCAAGAATTGGTCGTGTTGCAGGCAACAAGGACTTGTACCTGGGGACTTTCGCAACCGAAGAAGAAGCGGCGGAGGCG
TACGACATCGCAGCGCTGAAGTTCAGGGGCGACAATGCCGTCACCAACTTCGAGCCCAGCCGGTACAACCTGGAGGCGAT
CGCCTGCAGCGACCTTCCGGTCAACGGGAGGCGGATGAGCAGCCACAAGCCAACAGCGGCAGCAGCACCAGAAGCGCAAG
GCGAGATTACCTTCGTGTCCTCGGCTCCTCCGATTCCCCAGCAGTCGTGCAGTGACGTGCAAGTGCCACCTTACGTCCTC
CACGGCCTTCTGCAGCTCCAGGCCTCTGAGCCCCTGCATGCTCTGCCGCTTTCGAGCTACAGCTTTGGGGAGCCCAGCTT
CTACTGGCCCTTCGGCGACGTGGAGCAGAAGGTGCAGCTTGACAGCAAGGTGGAAGTGGCTGGTGGCATCCTTCAGCTGG
CCAACTCGGCTGTGTAG
Ta_4A:156137628-156137636:- does not have available information here.