
Microexon ID | Ta_4A:156137628-156137636:- |
Species | Triticum Aestivum | Coordinates | 4A:156137628..156137636 |
Microexon Cluster ID | MEP21 |
Size | 9 |
Phase | 1 |
Pfam Domain Motif | AP2 |
Structure of Microexon-tag (flanking exon, microexon, flanking exon sizes) | 49,9,50 |
Microexon location in the Microexon-tag | 2 |
Microexon-tag DNA Seq | TGGGAYAAYAGYWSYWGRARWGARRGYCARAVYARGAARGGAARRCAAGTTTAYYTRGGKGSWTATGAYRAKGARGARRMWGCWGCWMGRGCWTATGAYYTDGCWGCW |
Logo of Microexon-tag DNA Seq | ![]() |
Alignment of exons | ![]() |
Microexon DNA seq | TTTACTTGG |
Microexon Amino Acid seq | VYLG |
Microexon-tag DNA Seq | TGGGACAACACGTGCCGCCGCGAGGGCCAGAAACGCAAGGGACGCCAAGTTTACTTGGGTGGCTATGAAAAAGAAGATAGGGCTGCTAGGGCATATGATCTTGCTGCT |
Microexon-tag Amino Acid Seq | WDNTCRREGQKRKGRQVYLGGYEKEDRAARAYDLAA |
Microexon-tag spanning region | 156137481-156140220 |
Microexon-tag prediction score | 0.9363 |
Overlapped with the annotated transcript (%) | 100 |
New Transcript ID | TraesCS4A02G123800.1x |
Reference Transcript ID | TraesCS4A02G123800.1 |
Gene ID | TraesCS4A02G123800 |
Gene Name | NA |
Transcript ID | TraesCS4A02G123800.1 |
Protein ID | |
Gene ID | TraesCS4A02G123800 |
Gene Name | |
Pfam domain motif | AP2 |
Motif E-value | 1.50E-09 |
Motif start | 97 |
Motif end | 156 |
Protein seq | >TraesCS4A02G123800.1 MMSPPTNGSASLPVTDLSDAVLFPFDGFSADDFFATAPPPLPPTLGADPGRLLLASSRNDVHASTDLAVAAPVETTGSSS ALAAALPLTPSSGQRTSCYRGVTRHRWTKRYEAHLWDNTCRREGQKRKGRQVYLGGYEKEDRAARAYDLAALKYWGVNAT TNFPKENYIRELEEMQNMSRHELVASLRRKSSGFSRGASVYRGVTRHHQHGRWQARIGRVAGNKDLYLGTFATEEEAAEA YDIAALKFRGDNAVTNFEPSRYNLEAIACSDLPVNGRRMSSHKPTAAAAPEAQGEITFVSSAPPIPQQSCSDVQVPPYVL HGLLQLQASEPLHALPLSSYSFGEPSFYWPFGDVEQKVQLDSKVEVAGGILQLANSAV* |
CDS seq | >TraesCS4A02G123800.1 ATGATGTCGCCGCCGACGAACGGCTCCGCCTCGCTTCCCGTGACGGACCTGTCCGACGCGGTACTCTTCCCCTTCGACGG CTTCTCCGCCGACGACTTCTTCGCCACCGCCCCGCCTCCGCTTCCTCCTACTCTCGGCGCCGACCCGGGGCGCCTCCTCC TCGCGTCCTCCCGCAACGACGTCCACGCCTCCACGGACCTGGCCGTCGCGGCGCCCGTGGAGACCACCGGGAGCTCCTCC GCGCTGGCCGCGGCGCTGCCACTGACGCCGAGCTCCGGCCAAAGGACGTCGTGCTACCGCGGGGTGACCAGGCACCGGTG GACCAAACGGTACGAGGCGCACCTGTGGGACAACACGTGCCGCCGCGAGGGCCAGAAACGCAAGGGACGCCAAGTTTACT TGGGTGGCTATGAAAAAGAAGATAGGGCTGCTAGGGCATATGATCTTGCTGCTCTGAAATACTGGGGTGTCAATGCTACT ACTAATTTCCCTAAAGAAAACTACATCAGAGAGCTTGAGGAGATGCAAAACATGAGCAGGCACGAGCTTGTAGCTTCACT GAGGAGGAAGAGCAGTGGCTTCTCTAGGGGTGCATCGGTGTACAGAGGTGTCACAAGGCACCACCAACATGGACGCTGGC AGGCAAGAATTGGTCGTGTTGCAGGCAACAAGGACTTGTACCTGGGGACTTTCGCAACCGAAGAAGAAGCGGCGGAGGCG TACGACATCGCAGCGCTGAAGTTCAGGGGCGACAATGCCGTCACCAACTTCGAGCCCAGCCGGTACAACCTGGAGGCGAT CGCCTGCAGCGACCTTCCGGTCAACGGGAGGCGGATGAGCAGCCACAAGCCAACAGCGGCAGCAGCACCAGAAGCGCAAG GCGAGATTACCTTCGTGTCCTCGGCTCCTCCGATTCCCCAGCAGTCGTGCAGTGACGTGCAAGTGCCACCTTACGTCCTC CACGGCCTTCTGCAGCTCCAGGCCTCTGAGCCCCTGCATGCTCTGCCGCTTTCGAGCTACAGCTTTGGGGAGCCCAGCTT CTACTGGCCCTTCGGCGACGTGGAGCAGAAGGTGCAGCTTGACAGCAAGGTGGAAGTGGCTGGTGGCATCCTTCAGCTGG CCAACTCGGCTGTGTAG |
Ta_4A:156137628-156137636:- does not have available information here.