
Microexon ID | Ta_3B:666445118-666445126:+ |
Species | Triticum Aestivum | Coordinates | 3B:666445118..666445126 |
Microexon Cluster ID | MEP21 |
Size | 9 |
Phase | 1 |
Pfam Domain Motif | AP2 |
Structure of Microexon-tag (flanking exon, microexon, flanking exon sizes) | 49,9,50 |
Microexon location in the Microexon-tag | 2 |
Microexon-tag DNA Seq | TGGGAYAAYAGYWSYWGRARWGARRGYCARAVYARGAARGGAARRCAAGTTTAYYTRGGKGSWTATGAYRAKGARGARRMWGCWGCWMGRGCWTATGAYYTDGCWGCW |
Logo of Microexon-tag DNA Seq | ![]() |
Alignment of exons | ![]() |
Microexon DNA seq | TCTATCTAG |
Microexon Amino Acid seq | VYLG |
Microexon-tag DNA Seq | TGGGACAACAGTTGCAGAAGAGAAGGGCAAACTCGCAAGGGTCGTCAAGTCTATCTAGGTGGCTATGACAAAGAGGAGAAAGCTGCAAGAGCTTATGATTTGGCTGCT |
Microexon-tag Amino Acid Seq | WDNSCRREGQTRKGRQVYLGGYDKEEKAARAYDLAA |
Microexon-tag spanning region | 666444937-666445300 |
Microexon-tag prediction score | 0.9682 |
Overlapped with the annotated transcript (%) | 100 |
New Transcript ID | TraesCS3B02G427300.1x |
Reference Transcript ID | TraesCS3B02G427300.1 |
Gene ID | TraesCS3B02G427300 |
Gene Name | NA |
Transcript ID | TraesCS3B02G427300.1 |
Protein ID | |
Gene ID | TraesCS3B02G427300 |
Gene Name | |
Pfam domain motif | AP2 |
Motif E-value | 5.10E-11 |
Motif start | 310 |
Motif end | 367 |
Protein seq | >TraesCS3B02G427300.1 MGDPMRGLGFRSRVSLCVSGEDRRQGFSMAGRRGSVSSSRVQVASSMATVNNWLGFSLSPQELPPSAAASGDVSGADVCY NIPQDWNMRGSELSALVAEPKLEDFLGGISYSDHHHHQHKQPGGNNMVVPAGSASGGAACYANSGGSSVGYLYHPSSASL QFADSVMVASSGGGVHHDGAGIMANTTANGDLNGGGGGGIGLSMIKSWLRSQPSPAQAQPPEQQRAEAAAQGLSLSMNMA ACIPPLVGGERGVPELAIVRKDDTAGGSSAGSGAVVSAGADSTGGSSGAVVETPASRKTADTFGQRTSIYRGVTRHRWTG RYEAHLWDNSCRREGQTRKGRQVYLGGYDKEEKAARAYDLAALKYWGATTTTNFPVNNYEKELDEMKHMTRQEFVASLRR KSSGFSRGASIYRGVTRHHQHGRWQARIGRVAGNKDLYLGTFSTQEEAAEAYDIAAIKFRGLNAVTNFDMTRYDVKSILD STALPIGSAAKRLKDKEAATASSLALQQQQHAGVVSGYDMGALAAYGAAYHHHHPSVAGAVAWPTIAFQTPPQQVSGGGG GHMYHPYAHAQPLRGWCKQEPDHAVIAAAHSLQELHHLNLGAGGGAHDFFSQHAQAMQQQHGGLGSIDNGAGASLEHSTG SNSVVYNNGAVESYMLPMSTTTTAAVSHAHEQAAAHAHARAVAAQAYSGGNMSRDHDDGKIAYENYLVSTAEAYGGGRMA AWAPASAPPATSSSDMTGTQLFSVWNDTN* |
CDS seq | >TraesCS3B02G427300.1 ATGGGGGATCCTATGCGAGGTTTAGGGTTCCGCTCGCGCGTTTCTCTATGCGTTTCTGGAGAGGATCGACGCCAAGGTTT TTCTATGGCCGGAAGACGGGGGTCCGTGTCCTCTTCTAGGGTGCAGGTAGCTTCGAGCATGGCCACCGTGAACAACTGGT TGGGCTTCTCCCTCTCCCCGCAGGAGCTCCCTCCCTCCGCCGCCGCCTCAGGTGACGTCTCCGGCGCCGACGTCTGCTAC AACATCCCGCAAGATTGGAACATGAGGGGATCGGAGCTATCAGCGCTGGTGGCGGAGCCGAAGCTGGAGGACTTCCTTGG CGGCATATCTTATTCCGACCATCACCACCACCAGCACAAGCAGCCTGGCGGCAACAACATGGTCGTCCCTGCAGGCAGCG CCAGTGGCGGTGCCGCTTGCTACGCGAACTCTGGCGGCAGTAGCGTGGGCTACCTGTACCACCCCAGCTCGGCCTCCCTC CAGTTTGCCGACTCCGTCATGGTGGCTTCCTCCGGCGGTGGCGTCCACCACGACGGCGCTGGCATCATGGCGAACACCAC AGCCAACGGTGACCTTAATGGCGGCGGCGGGGGTGGCATCGGGCTGTCCATGATCAAGAGCTGGCTGCGGAGCCAGCCAT CCCCGGCACAAGCACAACCACCGGAGCAACAGAGGGCAGAGGCGGCGGCGCAGGGGCTCTCGCTGTCCATGAACATGGCG GCGTGCATACCGCCGCTTGTTGGCGGGGAGCGTGGCGTGCCGGAGTTGGCGATTGTACGGAAGGATGACACGGCTGGTGG CAGCAGTGCTGGTTCTGGCGCCGTAGTGTCGGCCGGTGCGGACAGCACTGGCGGAAGCAGTGGCGCGGTGGTCGAGACTC CAGCGTCGAGGAAGACAGCCGACACGTTTGGGCAGCGGACTTCGATTTATCGTGGCGTGACCAGGCATAGATGGACCGGG AGATATGAGGCTCACTTGTGGGACAACAGTTGCAGAAGAGAAGGGCAAACTCGCAAGGGTCGTCAAGTCTATCTAGGTGG CTATGACAAAGAGGAGAAAGCTGCAAGAGCTTATGATTTGGCTGCTCTCAAGTATTGGGGTGCCACGACGACGACAAATT TCCCAGTAAACAACTATGAAAAAGAGCTAGACGAGATGAAGCACATGACAAGGCAGGAGTTTGTGGCATCTCTGCGAAGA AAGAGCAGTGGTTTCTCCAGAGGTGCATCCATTTATCGTGGAGTAACTAGGCACCACCAACATGGGAGATGGCAAGCGAG GATAGGGAGAGTTGCAGGGAACAAGGACCTCTACTTGGGCACCTTCAGCACGCAGGAGGAGGCTGCCGAGGCGTACGACA TCGCGGCGATCAAGTTCAGGGGCCTTAACGCTGTCACCAACTTCGATATGACGCGCTACGACGTCAAGAGCATCCTCGAC AGCACCGCGCTCCCCATCGGCAGCGCCGCCAAGCGCCTCAAGGACAAAGAGGCAGCCACGGCGTCGTCCCTCGCGCTGCA GCAGCAGCAGCACGCAGGCGTGGTGAGCGGCTACGACATGGGCGCCCTGGCCGCCTACGGTGCGGCGTACCACCACCATC ACCCCTCCGTCGCCGGCGCTGTTGCGTGGCCGACCATCGCGTTCCAGACGCCGCCTCAGCAGGTTTCCGGCGGCGGTGGT GGACACATGTACCACCCCTACGCCCATGCGCAGCCGCTGCGCGGGTGGTGCAAGCAGGAGCCGGACCACGCGGTGATCGC GGCCGCGCACAGCCTGCAGGAGCTCCACCACCTCAACCTCGGCGCCGGTGGCGGCGCACACGACTTCTTCTCGCAGCATG CCCAGGCGATGCAGCAGCAGCATGGCGGCCTTGGCAGCATCGACAACGGGGCCGGCGCCTCGCTGGAGCACAGCACTGGC TCCAACTCCGTAGTGTACAACAACGGCGCGGTCGAGAGCTATATGCTGCCAATGAGCACCACCACCACTGCGGCGGTGAG CCACGCCCACGAGCAGGCGGCAGCGCATGCCCACGCACGGGCGGTGGCGGCACAGGCGTATAGCGGCGGCAACATGAGCA GGGATCACGACGACGGGAAGATCGCCTACGAGAACTACCTCGTCAGCACCGCAGAAGCCTACGGTGGGGGGAGGATGGCT GCGTGGGCGCCGGCCTCAGCTCCGCCGGCGACAAGCAGCAGCGACATGACCGGCACGCAGCTCTTCAGCGTCTGGAACGA CACTAATTAG |
Ta_3B:666445118-666445126:+ does not have available information here.