
Microexon ID | Ta_2D:311716977-311716985:+ |
Species | Triticum Aestivum | Coordinates | 2D:311716977..311716985 |
Microexon Cluster ID | MEP21 |
Size | 9 |
Phase | 1 |
Pfam Domain Motif | AP2 |
Structure of Microexon-tag (flanking exon, microexon, flanking exon sizes) | 49,9,50 |
Microexon location in the Microexon-tag | 2 |
Microexon-tag DNA Seq | TGGGAYAAYAGYWSYWGRARWGARRGYCARAVYARGAARGGAARRCAAGTTTAYYTRGGKGSWTATGAYRAKGARGARRMWGCWGCWMGRGCWTATGAYYTDGCWGCW |
Logo of Microexon-tag DNA Seq | ![]() |
Alignment of exons | ![]() |
Microexon DNA seq | TTTACCTCG |
Microexon Amino Acid seq | VYLG |
Microexon-tag DNA Seq | TGGGACAACAGCTGCAAGAAGGAAGGCCAGACCAGGAAAGGGAGGCAAGTTTACCTCGGAGGATATGACATGGAGGAGAAGGCGGCGAGAGCCTACGACCAGGCGGCG |
Microexon-tag Amino Acid Seq | WDNSCKKEGQTRKGRQVYLGGYDMEEKAARAYDQAA |
Microexon-tag spanning region | 311716808-311717143 |
Microexon-tag prediction score | 0.9562 |
Overlapped with the annotated transcript (%) | 100 |
New Transcript ID | TraesCS2D02G256600.2x |
Reference Transcript ID | TraesCS2D02G256600.2 |
Gene ID | TraesCS2D02G256600 |
Gene Name | PARG-2D |
Transcript ID | TraesCS2D02G256600.2 |
Protein ID | |
Gene ID | TraesCS2D02G256600 |
Gene Name | |
Pfam domain motif | AP2 |
Motif E-value | 1.70E-12 |
Motif start | 263 |
Motif end | 321 |
Protein seq | >TraesCS2D02G256600.2 MTNNNGNGNGGSNAAASGWLGFSLSPHMDEHNHVQQQQQHQGLFYPSSVAAAYSLGGDVATDGYYSQLASMPLKSDGSLC IMEALRRTDQQDHHGPKLEDFLGAGQPAMALSLDNTSNFYYYGGGGGAGGQHGQSHGGSFLQQAYDVYSGPATASVLAAN EDAAAATAMANWVQVARGATAYATAENVLSAAADRQQHLHHHPLALSMSSAGSLSSCVTAGAEYGGVGATVDGGRKRGGA TAGQKQPVHHRKSIDTFGQRTSQYRGVTRHRWTGRYEAHLWDNSCKKEGQTRKGRQVYLGGYDMEEKAARAYDQAALKYW GPSTHINFPLEDYQQELEEMKNMTRQEYVAHLRRKSSGFSRGASMYRGVTRHHQHGRWQARIGRVSGNKDLYLGTFGTQE EAAEAYDIAAIKFRGLNAVTNFDITRYDVDKIMASNTLLPGEHARRNKDDNAAPLPLPAPDDCAASALVPVSTPGTDTGG SGQHRYHDVMSSGEAFSALHDLVTVDGHTAQGGNGAHVHMSMSGASSLVTSLSNSREESPDRGGGLSMLFAKPPQQPATT TAASPKLMSTLKPLGSWASSARPAAVSIAHMPMFAAWSDA* |
CDS seq | >TraesCS2D02G256600.2 ATGACCAACAACAACGGCAATGGCAATGGCGGCAGCAACGCGGCGGCGAGTGGCTGGCTGGGCTTCTCGCTCTCGCCGCA CATGGACGAACACAACCACGTGCAGCAGCAGCAACAGCACCAGGGCCTATTCTACCCCAGCTCCGTCGCCGCCGCCTACA GCCTCGGCGGCGACGTCGCCACCGACGGGTACTATTCGCAGCTAGCCTCCATGCCTCTCAAGTCAGACGGCTCCCTCTGC ATCATGGAAGCTCTACGCCGAACCGATCAACAAGATCACCACGGTCCGAAGCTGGAGGACTTTCTGGGCGCGGGGCAACC GGCGATGGCGCTGAGCCTGGACAACACCTCCAACTTCTATTACTACGGCGGCGGTGGCGGAGCCGGTGGGCAACACGGAC AGAGCCACGGCGGCAGCTTCCTGCAGCAAGCATACGACGTGTACAGCGGGCCCGCAACGGCATCGGTGCTGGCGGCCAAT GAGGACGCCGCGGCAGCCACGGCCATGGCGAACTGGGTGCAGGTCGCGCGCGGTGCCACCGCGTACGCCACAGCCGAGAA CGTCTTGTCCGCGGCGGCGGACCGGCAGCAGCATCTTCACCACCACCCTCTGGCACTCTCCATGAGCTCCGCCGGGTCGC TCTCCAGCTGCGTTACCGCGGGGGCCGAGTACGGCGGCGTCGGGGCGACGGTGGACGGCGGGCGAAAGCGCGGCGGCGCG ACGGCGGGGCAGAAGCAGCCGGTGCACCACCGCAAGTCCATCGACACGTTCGGGCAGCGCACGTCGCAGTACCGTGGCGT CACCAGGCATAGGTGGACGGGGCGGTATGAGGCGCACCTGTGGGACAACAGCTGCAAGAAGGAAGGCCAGACCAGGAAAG GGAGGCAAGTTTACCTCGGAGGATATGACATGGAGGAGAAGGCGGCGAGAGCCTACGACCAGGCGGCGCTCAAGTACTGG GGCCCTTCCACCCATATCAACTTCCCGCTCGAGGACTACCAGCAGGAGCTGGAGGAGATGAAGAACATGACGAGGCAGGA GTACGTGGCACACCTTAGAAGGAAGAGCAGCGGCTTCTCGCGTGGCGCGTCCATGTACCGTGGCGTGACCCGGCACCACC AGCACGGGCGGTGGCAGGCGCGCATCGGCCGCGTCTCCGGCAACAAGGACCTCTACCTCGGCACTTTCGGCACCCAGGAG GAGGCCGCGGAGGCGTACGACATCGCCGCCATCAAGTTCCGGGGCCTCAACGCCGTCACCAACTTCGACATCACCCGCTA CGACGTCGACAAGATCATGGCCAGCAACACGCTCCTCCCGGGCGAGCACGCCAGGCGCAACAAGGACGACAACGCCGCGC CCCTGCCCCTCCCCGCCCCCGACGACTGCGCCGCCTCTGCCCTGGTGCCCGTGTCCACTCCGGGGACGGACACCGGCGGC AGCGGCCAGCACCGCTACCACGACGTCATGTCCTCGGGCGAGGCCTTCTCGGCGCTACACGACCTGGTCACCGTGGACGG CCACACCGCGCAGGGCGGGAACGGCGCGCACGTGCACATGTCGATGTCGGGCGCATCGTCGCTGGTGACGAGCCTGAGCA ACTCCCGAGAGGAGAGCCCAGACCGGGGCGGCGGGCTGTCCATGCTCTTCGCCAAGCCGCCGCAGCAGCCGGCCACGACA ACGGCGGCGTCCCCGAAGCTGATGAGCACTCTGAAGCCGCTGGGCTCCTGGGCGTCGTCGGCGAGGCCGGCCGCCGTTTC CATCGCTCACATGCCCATGTTCGCCGCGTGGAGCGACGCATGA |
Ta_2D:311716977-311716985:+ does not have available information here.