
Microexon ID | Ta_2B:730301692-730301700:- |
Species | Triticum Aestivum | Coordinates | 2B:730301692..730301700 |
Microexon Cluster ID | MEP21 |
Size | 9 |
Phase | 1 |
Pfam Domain Motif | AP2 |
Structure of Microexon-tag (flanking exon, microexon, flanking exon sizes) | 49,9,50 |
Microexon location in the Microexon-tag | 2 |
Microexon-tag DNA Seq | TGGGAYAAYAGYWSYWGRARWGARRGYCARAVYARGAARGGAARRCAAGTTTAYYTRGGKGSWTATGAYRAKGARGARRMWGCWGCWMGRGCWTATGAYYTDGCWGCW |
Logo of Microexon-tag DNA Seq | ![]() |
Alignment of exons | ![]() |
Microexon DNA seq | TGTACCTCG |
Microexon Amino Acid seq | VYLG |
Microexon-tag DNA Seq | TGGGACAACAGCTGCCGGCGTGAAGGCCAGAGCCGCAAGGGCCGCCAAGTGTACCTCGGTGGCTATGATAAGGAGGAGAAGGCGGCAAGGGCGTACGATCTCGCCGCG |
Microexon-tag Amino Acid Seq | WDNSCRREGQSRKGRQVYLGGYDKEEKAARAYDLAA |
Microexon-tag spanning region | 730301551-730301898 |
Microexon-tag prediction score | 0.9483 |
Overlapped with the annotated transcript (%) | 100 |
New Transcript ID | TraesCS2B02G534000.1x |
Reference Transcript ID | TraesCS2B02G534000.1 |
Gene ID | TraesCS2B02G534000 |
Gene Name | NA |
Transcript ID | TraesCS2B02G534000.1 |
Protein ID | |
Gene ID | TraesCS2B02G534000 |
Gene Name | |
Pfam domain motif | AP2 |
Motif E-value | 2.30E-11 |
Motif start | 139 |
Motif end | 196 |
Protein seq | >TraesCS2B02G534000.1 MDMDAAHGHYPWLNFSLAHHCEMGEEERGAAAELAAIAGAGPPPKLEDFLGGGANGNHNGRNNNDAGRGDQVVSAATAEM YDSELKFLAAGFLGGATGTTAPTISPAAAPQEQADPKMPAPAPEQKKAVDSFGQRTSIYRGVTRHRWTGRYEAHLWDNSC RREGQSRKGRQVYLGGYDKEEKAARAYDLAALKYWGSSTTTNFPVADYEKEVEEMKHMTRQEFVASLRRKSSGFSRGASI YRGVTRHHQHGRWQARIGRVAGNKDLYLGTFSTEEEAAEAYDIAAIKFRGLSAVTNFEIGRYNVESIISSNLPIGNMSGG AGRGSKALESSSPEAAALPVEAPHSLAFTALPMKYDQQQQDYLSFLALQHHQQGNLQGLGYGLYSSGVNLDFANAGPGGA MAPHCYGSNAGDLHLQQHDQQQQQHEGEGQEQQHDQHHSMGFGASTPMAAFSSGGPYESSVTAGSFGYYPNVAAFQTPIF GME* |
CDS seq | >TraesCS2B02G534000.1 ATGGACATGGACGCCGCGCATGGCCACTACCCGTGGCTCAACTTCTCCCTCGCTCACCACTGTGAGATGGGGGAGGAGGA GCGGGGAGCGGCCGCCGAGCTGGCCGCCATCGCCGGGGCCGGGCCGCCGCCCAAGCTCGAGGACTTCCTCGGGGGCGGCG CCAACGGCAACCACAACGGAAGGAATAATAATGACGCCGGCCGCGGCGACCAGGTTGTCTCTGCAGCGACCGCGGAGATG TACGACTCAGAGCTCAAGTTCCTGGCCGCCGGATTCCTGGGCGGCGCTACCGGAACCACGGCGCCCACTATCTCCCCGGC AGCGGCTCCTCAGGAGCAGGCCGACCCGAAGATGCCGGCCCCTGCGCCGGAGCAGAAGAAGGCCGTCGACTCCTTCGGCC AGAGGACCTCCATCTACCGTGGCGTCACGCGGCACCGTTGGACGGGTAGGTACGAGGCGCATCTGTGGGACAACAGCTGC CGGCGTGAAGGCCAGAGCCGCAAGGGCCGCCAAGTGTACCTCGGTGGCTATGATAAGGAGGAGAAGGCGGCAAGGGCGTA CGATCTCGCCGCGCTGAAGTACTGGGGGTCTAGCACCACCACCAACTTCCCGGTTGCCGACTATGAAAAGGAGGTGGAGG AGATGAAGCACATGACACGCCAGGAGTTTGTAGCTTCACTTAGGAGGAAGAGTAGTGGTTTCTCCCGTGGTGCTTCCATA TACAGGGGTGTCACAAGACATCACCAGCATGGTCGATGGCAGGCGAGGATCGGACGGGTTGCTGGCAACAAGGATCTATA CCTCGGAACATTCAGCACCGAGGAGGAAGCCGCGGAGGCCTACGACATCGCGGCCATCAAGTTCCGGGGCCTGAGCGCGG TCACCAACTTCGAGATCGGCCGGTACAACGTGGAGAGCATCATCAGCAGCAACCTCCCGATCGGCAACATGTCCGGCGGC GCAGGGCGGGGCAGCAAGGCCCTGGAGTCCAGCTCCCCGGAAGCCGCCGCATTGCCCGTGGAAGCGCCGCACTCGCTGGC GTTCACGGCGCTGCCGATGAAGTACGACCAGCAGCAGCAGGACTACCTGTCGTTCCTGGCCCTGCAGCACCACCAGCAGG GCAACCTCCAGGGGCTCGGCTACGGCCTCTACAGCTCCGGCGTCAACCTGGACTTCGCCAACGCCGGCCCCGGCGGCGCG ATGGCGCCTCACTGCTACGGCAGCAACGCCGGCGACTTGCACCTTCAGCAACACGATCAGCAGCAGCAGCAGCACGAGGG GGAGGGGCAGGAGCAGCAGCATGATCAGCATCACTCCATGGGGTTCGGCGCGTCGACGCCCATGGCGGCTTTCAGCAGCG GCGGGCCCTACGAAAGCTCGGTGACGGCAGGGTCCTTTGGATACTACCCAAATGTGGCAGCCTTTCAGACGCCGATCTTT GGAATGGAATGA |
Ta_2B:730301692-730301700:- does not have available information here.