
Microexon ID | Ta_2A:733857066-733857074:- |
Species | Triticum Aestivum | Coordinates | 2A:733857066..733857074 |
Microexon Cluster ID | MEP21 |
Size | 9 |
Phase | 1 |
Pfam Domain Motif | AP2 |
Structure of Microexon-tag (flanking exon, microexon, flanking exon sizes) | 49,9,50 |
Microexon location in the Microexon-tag | 2 |
Microexon-tag DNA Seq | TGGGAYAAYAGYWSYWGRARWGARRGYCARAVYARGAARGGAARRCAAGTTTAYYTRGGKGSWTATGAYRAKGARGARRMWGCWGCWMGRGCWTATGAYYTDGCWGCW |
Logo of Microexon-tag DNA Seq | ![]() |
Alignment of exons | ![]() |
Microexon DNA seq | TTTACCTCG |
Microexon Amino Acid seq | VYLG |
Microexon-tag DNA Seq | TGGGACAACAGCTGCCGGCGTGAAGGCCAGAGCCGCAAGGGCCGCCAAGTTTACCTCGGTGGCTATGATAAGGAGGAGAAGGCGGCAAGGGCGTACGATCTCGCCGCG |
Microexon-tag Amino Acid Seq | WDNSCRREGQSRKGRQVYLGGYDKEEKAARAYDLAA |
Microexon-tag spanning region | 733856930-733857289 |
Microexon-tag prediction score | 0.9506 |
Overlapped with the annotated transcript (%) | 100 |
New Transcript ID | TraesCS2A02G505600.1x |
Reference Transcript ID | TraesCS2A02G505600.1 |
Gene ID | TraesCS2A02G505600 |
Gene Name | NA |
Transcript ID | TraesCS2A02G505600.1 |
Protein ID | |
Gene ID | TraesCS2A02G505600 |
Gene Name | |
Pfam domain motif | AP2 |
Motif E-value | 2.30E-11 |
Motif start | 135 |
Motif end | 192 |
Protein seq | >TraesCS2A02G505600.1 MDMDAAHGHYPWLNFSLAHHCEMEEEERGAAAELAAIAGAGPPPKLEDFLGGGANGRNNNDAGRGDQVVSAATAEMYDSE LKFLAAGFLSGASGTTAPTISPAAAPQEQADPKMTAPTPEQKKAVDSFGQRTSIYRGVTRHRWTGRYEAHLWDNSCRREG QSRKGRQVYLGGYDKEEKAARAYDLAALKYWGSSTTTNFPVADYEKEVEEMKHMTRQEFVASLRRKSSGFSRGASIYRGV TRHHQHGRWQARIGRVAGNKDLYLGTFSTEEEAAEAYDIAAIKFRGLNAVTNFEIGRYNVESIISSNLPIGNMSGGAGRG SKALESSSPEAAPLPVEAPHSLAFTALPMKYDQQQQDYLSFLALQHHQQGNLQGLGYGLYSSGVNLDFANAGPGGAMAPH CYGSNGVDLHLQQHDHQQEQEGEGQQQQHDQHQSMGFGASTPMAAFSSGGPYESSVTAGSFGYYPNVAAFQTPIFGME* |
CDS seq | >TraesCS2A02G505600.1 ATGGACATGGACGCCGCGCATGGCCACTACCCGTGGCTCAACTTCTCCCTCGCTCACCACTGTGAGATGGAGGAGGAGGA GCGGGGAGCGGCCGCCGAGCTGGCCGCCATCGCCGGGGCCGGGCCGCCGCCCAAGCTCGAGGACTTCCTCGGGGGCGGCG CCAACGGGAGGAATAATAATGACGCCGGCCGCGGCGACCAGGTTGTGTCTGCAGCGACCGCCGAGATGTACGACTCAGAG CTCAAGTTCTTGGCCGCCGGATTCCTGAGCGGTGCTAGTGGAACCACGGCACCCACTATCTCCCCAGCGGCGGCTCCTCA GGAGCAGGCCGACCCGAAGATGACGGCCCCGACGCCGGAGCAGAAGAAGGCCGTCGACTCCTTCGGGCAGAGGACCTCCA TCTACCGTGGCGTCACGCGGCACCGTTGGACGGGTAGATACGAGGCGCATCTGTGGGACAACAGCTGCCGGCGTGAAGGC CAGAGCCGCAAGGGCCGCCAAGTTTACCTCGGTGGCTATGATAAGGAGGAGAAGGCGGCAAGGGCGTACGATCTCGCCGC GCTGAAGTACTGGGGGTCTAGCACCACCACCAACTTCCCGGTTGCCGACTATGAAAAGGAGGTGGAGGAGATGAAGCACA TGACACGCCAGGAGTTTGTAGCTTCACTTAGGAGGAAGAGTAGTGGATTCTCCCGTGGCGCTTCCATATACAGGGGTGTC ACAAGACATCACCAGCATGGTCGATGGCAGGCTAGGATCGGACGTGTTGCTGGCAACAAGGATCTATACCTCGGAACATT CAGCACGGAGGAGGAAGCCGCGGAAGCCTACGACATTGCGGCCATCAAGTTCCGGGGCCTGAACGCCGTCACCAACTTCG AGATCGGCCGGTACAACGTGGAGAGCATCATCAGCAGCAACCTCCCGATCGGCAACATGTCCGGCGGCGCGGGGCGGGGC AGCAAGGCCCTGGAGTCCAGCTCCCCGGAAGCCGCTCCATTGCCCGTCGAAGCGCCGCACTCGCTGGCGTTCACGGCGCT GCCGATGAAGTACGACCAGCAGCAGCAGGACTACCTCTCGTTCCTGGCGCTCCAGCACCACCAGCAGGGCAACCTGCAGG GGCTGGGCTACGGGCTCTACAGCTCCGGCGTCAACCTCGACTTCGCCAACGCCGGCCCCGGCGGCGCCATGGCGCCTCAC TGCTACGGTAGCAACGGCGTCGACTTGCACCTTCAGCAACACGACCATCAGCAGGAGCAGGAGGGGGAGGGGCAGCAGCA GCAGCATGATCAGCATCAGTCCATGGGGTTCGGCGCGTCGACGCCCATGGCGGCTTTCAGCAGCGGTGGGCCCTACGAAA GCTCGGTGACGGCCGGGTCCTTTGGATACTATCCAAATGTGGCAGCCTTTCAGACGCCGATCTTTGGAATGGAATGA |
Ta_2A:733857066-733857074:- does not have available information here.