
Microexon ID | Ta_2A:428909458-428909466:+ |
Species | Triticum Aestivum | Coordinates | 2A:428909458..428909466 |
Microexon Cluster ID | MEP21 |
Size | 9 |
Phase | 1 |
Pfam Domain Motif | AP2 |
Structure of Microexon-tag (flanking exon, microexon, flanking exon sizes) | 49,9,50 |
Microexon location in the Microexon-tag | 2 |
Microexon-tag DNA Seq | TGGGAYAAYAGYWSYWGRARWGARRGYCARAVYARGAARGGAARRCAAGTTTAYYTRGGKGSWTATGAYRAKGARGARRMWGCWGCWMGRGCWTATGAYYTDGCWGCW |
Logo of Microexon-tag DNA Seq | ![]() |
Alignment of exons | ![]() |
Microexon DNA seq | TTTACCTCG |
Microexon Amino Acid seq | VYLG |
Microexon-tag DNA Seq | TGGGACAACAGCTGCAAGAAGGAAGGCCAGACCAGGAAAGGGAGGCAAGTTTACCTCGGAGGGTATGACATGGAGGAGAAGGCGGCGAGAGCCTACGACCAGGCGGCG |
Microexon-tag Amino Acid Seq | WDNSCKKEGQTRKGRQVYLGGYDMEEKAARAYDQAA |
Microexon-tag spanning region | 428909288-428909629 |
Microexon-tag prediction score | 0.9544 |
Overlapped with the annotated transcript (%) | 100 |
New Transcript ID | TraesCS2A02G267600.2x |
Reference Transcript ID | TraesCS2A02G267600.2 |
Gene ID | TraesCS2A02G267600 |
Gene Name | PARG-2A |
Transcript ID | TraesCS2A02G267600.2 |
Protein ID | |
Gene ID | TraesCS2A02G267600 |
Gene Name | |
Pfam domain motif | AP2 |
Motif E-value | 4.00E-12 |
Motif start | 264 |
Motif end | 322 |
Protein seq | >TraesCS2A02G267600.2 MTNNNGNGNGGSNAAASGWLGFSLSPHMDEHNHVQQQQQQHQGLFYPSSVAAAYSLGSDVATGGYYSQLASMPLKSDGSL CIMEALRRTDQQDHHGPKLEDFLGAGQPAMALSLDNTSNFYYYSGGGGAGGQHGQSHGGGFLQQAYDVYGGPATASVLAA DEDAAAATAMANWVQVARGATAYATAENVLSAAADRQQHLHHHPLALSMSSAGSLSSCVTAGAEYGGVVATVDGGRKRGG ATAGQKQPVHHRKSIDTFGQRTSQHRGVTRHRWTGRYEAHLWDNSCKKEGQTRKGRQVYLGGYDMEEKAARAYDQAALKY WGPSTHINFPLEDYQQELEEMKNMTRQEYVAHLRRKSSGFSRGASMYRGVTRHHQHGRWQARIGRVSGNKDLYLGTFGTQ EEAAEAYDIAAIKFRGLNAVTNFDITRYDVDKIMASNTLLPGELARRNKDANAAPLPLPAPDDCAASALVPVSTPGTDTG GSGQHRNQDVMSSGEAFSALHDLVTVDGHTAQGGNGARVHMSMSGASSLVTSLSNSREESPDRGGGLSMLFAKPPQQPAT TTAASPKLMSTLAPLGSWASSARPAAVSIAHMPMFAAWSDA* |
CDS seq | >TraesCS2A02G267600.2 ATGACCAACAACAACGGCAATGGGAATGGCGGCAGCAACGCGGCGGCGAGTGGCTGGCTGGGCTTCTCGCTCTCGCCGCA CATGGACGAACACAACCACGTGCAGCAGCAGCAGCAACAACACCAGGGCCTATTCTACCCCAGCTCCGTCGCCGCCGCCT ACAGCCTCGGCAGCGACGTCGCCACCGGCGGGTACTATTCGCAGCTAGCCTCCATGCCTCTCAAGTCAGACGGCTCCCTC TGCATCATGGAAGCTCTACGCCGAACCGATCAACAAGATCACCACGGTCCGAAGCTGGAGGACTTTCTGGGCGCGGGGCA ACCGGCGATGGCGCTGAGCCTGGACAACACCTCCAACTTCTATTACTACAGCGGCGGTGGCGGAGCAGGTGGGCAACACG GACAGAGCCACGGCGGCGGCTTCCTGCAGCAAGCATACGACGTGTACGGCGGGCCCGCAACGGCATCGGTGCTGGCGGCC GATGAGGACGCCGCGGCAGCCACGGCCATGGCGAACTGGGTGCAGGTCGCGCGCGGTGCCACCGCGTACGCCACAGCCGA GAACGTCTTGTCCGCGGCGGCGGACCGGCAGCAGCATCTTCACCACCACCCTCTGGCACTCTCCATGAGCTCCGCCGGGT CGCTCTCCAGCTGCGTTACCGCGGGGGCCGAGTACGGCGGCGTCGTGGCGACGGTGGACGGCGGGCGAAAACGCGGTGGC GCGACGGCGGGGCAGAAGCAGCCGGTGCACCACCGCAAGTCCATCGACACGTTCGGGCAGCGCACGTCGCAGCACCGTGG CGTCACCAGGCATAGGTGGACGGGGCGGTATGAGGCGCACCTGTGGGACAACAGCTGCAAGAAGGAAGGCCAGACCAGGA AAGGGAGGCAAGTTTACCTCGGAGGGTATGACATGGAGGAGAAGGCGGCGAGAGCCTACGACCAGGCGGCGCTCAAGTAC TGGGGGCCTTCCACCCATATCAACTTCCCGCTCGAGGACTACCAGCAGGAGCTGGAGGAGATGAAGAACATGACGAGGCA GGAGTACGTGGCACACCTTAGAAGGAAGAGCAGCGGCTTCTCGCGTGGCGCGTCCATGTACCGTGGCGTGACCCGGCACC ACCAGCACGGGCGGTGGCAGGCGCGCATCGGCCGCGTCTCCGGCAACAAGGACCTCTATCTCGGCACTTTCGGCACCCAG GAGGAGGCCGCGGAGGCGTACGACATCGCCGCCATCAAGTTCCGGGGACTCAACGCCGTCACCAACTTCGACATCACCCG CTACGACGTCGACAAGATCATGGCCAGCAACACGCTCCTCCCGGGCGAGCTCGCCAGGCGCAACAAGGACGCCAACGCCG CGCCCCTGCCCCTCCCCGCCCCCGACGACTGCGCCGCCTCTGCCCTGGTGCCCGTGTCTACTCCGGGGACGGACACCGGC GGCAGCGGCCAGCACCGAAACCAGGACGTCATGTCCTCGGGCGAGGCCTTCTCGGCGCTGCACGACCTGGTCACCGTGGA CGGCCACACCGCGCAGGGCGGCAACGGCGCGCGCGTGCACATGTCGATGTCGGGCGCATCGTCGCTGGTGACGAGCCTGA GCAACTCCCGCGAGGAGAGCCCAGACCGGGGCGGTGGCCTGTCTATGCTCTTCGCCAAGCCGCCGCAGCAGCCGGCCACG ACAACGGCGGCGTCCCCGAAGCTGATGAGCACTCTGGCGCCGCTGGGTTCCTGGGCGTCGTCGGCGAGGCCGGCCGCCGT TTCCATCGCTCACATGCCCATGTTCGCCGCGTGGAGCGACGCATGA |
Ta_2A:428909458-428909466:+ does not have available information here.