| Microexon ID | Sm_GL377619:235408-235416:+ |
| Species | Selaginella moellendorffii | Coordinates | GL377619:235408..235416 |
| Microexon Cluster ID | MEP21 |
| Size | 9 |
| Phase | 1 |
| Pfam Domain Motif | AP2 |
| Structure of Microexon-tag (flanking exon, microexon, flanking exon sizes) | 49,9,50 |
| Microexon location in the Microexon-tag | 2 |
| Microexon-tag DNA Seq | TGGGAYAAYAGYWSYWGRARWGARRGYCARAVYARGAARGGAARRCAAGTTTAYYTRGGKGSWTATGAYRAKGARGARRMWGCWGCWMGRGCWTATGAYYTDGCWGCW |
| Logo of Microexon-tag DNA Seq |  |
| Alignment of exons |  |
| Microexon DNA seq | TGTACTTAG |
| Microexon Amino Acid seq | VYLG |
| Microexon-tag DNA Seq | TGGGACAATACTTGCCGAAAGGAAGGACAGACGAGGAAAGGAAGACAAGTGTACTTAGGGGGATATGATGCGGAGGAGAAGGCAGCAAGAGCTTACGATCTGGCAGCT |
| Microexon-tag Amino Acid Seq | WDNTCRKEGQTRKGRQVYLGGYDAEEKAARAYDLAA |
| Microexon-tag spanning region | 235244-235537 |
| Microexon-tag prediction score | 0.9749 |
| Overlapped with the annotated transcript (%) | 91.67 |
| New Transcript ID | EFJ16224x |
| Reference Transcript ID | EFJ16224 |
| Gene ID | SELMODRAFT_17095 |
| Gene Name | NA |
Sm_GL377619:235408-235416:+ does not have available information here.
| Microexon DNA seq | TGTACTTAG |
| Microexon Amino Acid seq | VYLG |
| Microexon-tag DNA Seq | TGGGACAATACTTGCCGAAAGGAAGGACAGACGAGGAAAGGAAGACAAGTGTACTTAGGGGGATATGATGCGGAGGAGAAGGCAGCAAGAGCTTACGATCTGGCAGCT |
| Microexon-tag Amino Acid seq | WDNTCRKEGQTRKGRQVYLGGYDAEEKAARAYDLAA |
| Transcript ID | Sm.21177.1 |
| Gene ID | Sm.21177 |
| Gene Name | NA |
| Pfam domain motif | AP2 |
| Motif E-value | 1e-12 |
| Motif start | 252 |
| Motif end | 311 |
| Protein seq | >Sm.21177.1 MQQPVEDCQRGSSIRSDNTFQSSSSPALPIQMQHHDFMGQGTLEHPHGFVDHHYHLSPGMISTRYGAISNSMVASLQSPY NFQLLRRTLLPVSAFAEQQRAQVSSSPPSPLLSDSHRQIDQTSAQQQQQHGTTNLSTLKSLLRQPQENSHDDHLPSMDQS HHQSAIVNHQSLTLSMSSGSQSSNTDSSSIAAHHDHQPLVTFQDQELPPPPSSSATITAINLPRTTGSKKRLGKNKAPNL RKSIDTFGQRTSVFRGVTRHRWTGRFEAHLWDNTCRKEGQTRKGRQVYLGGYDAEEKAARAYDLAALKYWGPTTTTNFPA VEYHSKLNEMKSMSRQAFVAALRRKSSGFARGASRFRGVTRHHQQGRWQARIGRVAGNKDLYLGTFSTEEEAAEAYDIAA IKFRGASAVTNFDMSHYDLRRICSSPSLLLGDTARIKHKEAPDAANDQSATTAADEPICDDGGALVTSSVPQDSLANQEH NYAGAAGPGVLRNLIGLDTFSCQADHPEAPDTSSSDGGGGGGGVPSSSVAQHDDQLYTPAPPDYSTGSLMPSPLQTLHAM RSTIPAHMPYFSAWNESE* |
| CDS seq | >Sm.21177.1 ATGCAGCAGCCGGTAGAAGATTGCCAGAGGGGTTCTTCCATTCGCAGCGACAACACCTTCCAGAGCTCCAGTTCTCCAGC GCTCCCGATCCAGATGCAGCACCACGATTTCATGGGCCAAGGTACCCTGGAGCATCCCCACGGCTTCGTCGATCACCACT ACCATCTCTCGCCAGGGATGATCAGCACAAGATACGGCGCTATTTCCAACTCCATGGTCGCCTCACTGCAGTCGCCATAC AACTTTCAGCTATTAAGGAGAACGCTTCTTCCGGTAAGTGCCTTCGCAGAACAGCAGCGAGCACAAGTCTCTTCGTCTCC TCCTTCGCCGCTTCTCAGCGATTCTCACCGCCAGATCGATCAGACGAGCGCGCAGCAGCAGCAGCAGCACGGCACTACCA ATTTGTCCACTCTCAAATCTTTACTGAGGCAGCCGCAAGAGAATAGCCACGACGATCATCTTCCTTCCATGGATCAAAGC CACCACCAGAGCGCTATCGTCAATCATCAGTCGCTGACTTTGTCCATGAGTTCCGGCTCACAGTCGAGCAACACCGATTC GTCTTCCATCGCCGCCCACCACGATCACCAGCCGCTCGTGACCTTCCAGGACCAGGAGCTACCACCGCCGCCATCCTCGT CCGCCACCATCACCGCCATCAATCTTCCAAGGACCACCGGTAGCAAGAAGAGGCTCGGCAAGAACAAGGCGCCCAACTTG CGCAAATCGATCGATACTTTCGGGCAGCGAACATCGGTCTTTCGGGGTGTGACCAGGCATCGCTGGACTGGGCGTTTTGA GGCTCATCTCTGGGACAATACTTGCCGAAAGGAAGGACAGACGAGGAAAGGAAGACAAGTGTACTTAGGGGGATATGATG CGGAGGAGAAGGCAGCAAGAGCTTACGATCTGGCAGCTCTCAAGTACTGGGGGCCTACGACAACTACAAACTTTCCGGCT GTGGAGTATCACTCCAAGTTAAATGAGATGAAGAGTATGAGCAGACAGGCATTTGTTGCTGCGCTCAGGAGGAAGAGCAG TGGCTTCGCGAGAGGTGCATCGAGGTTCAGGGGTGTAACAAGGCATCACCAGCAAGGAAGATGGCAAGCTCGGATCGGAC GAGTTGCCGGGAATAAAGATCTGTACCTCGGAACTTTCAGTACTGAAGAAGAAGCTGCCGAAGCTTACGACATCGCAGCC ATCAAGTTCCGCGGTGCAAGCGCGGTGACAAACTTCGACATGAGTCACTACGACTTGAGGCGGATTTGCTCCAGCCCGAG CTTGCTACTGGGTGACACCGCCAGGATCAAGCACAAGGAAGCTCCCGACGCAGCGAACGATCAGAGCGCCACCACAGCAG CTGACGAACCGATATGTGATGATGGAGGAGCTCTCGTAACTTCTTCCGTTCCTCAAGACTCTCTCGCTAATCAGGAGCAC AACTATGCTGGTGCCGCGGGGCCGGGAGTTCTTCGCAACCTCATTGGACTGGACACGTTCTCTTGTCAAGCTGATCATCC TGAAGCTCCCGATACGAGCTCCTCGGATGGTGGTGGTGGAGGTGGCGGAGTTCCAAGTTCCTCCGTAGCTCAGCACGACG ATCAGCTTTATACTCCGGCGCCGCCAGATTACAGCACCGGATCCCTGATGCCATCACCGCTGCAAACTCTGCACGCGATG AGGTCCACAATCCCGGCACACATGCCTTACTTCTCAGCCTGGAACGAGTCGGAGTGA |