Microexon ID Sb_4:58504364-58504372:+
Species Sorghum   Bicolor
Coordinates 4:58504364..58504372
Microexon Cluster ID MEP21
Size 9
Phase 1
Pfam Domain Motif AP2
Structure of Microexon-tag (flanking exon, microexon, flanking exon sizes) 49,9,50
Microexon location in the Microexon-tag 2
Microexon-tag DNA Seq TGGGAYAAYAGYWSYWGRARWGARRGYCARAVYARGAARGGAARRCAAGTTTAYYTRGGKGSWTATGAYRAKGARGARRMWGCWGCWMGRGCWTATGAYYTDGCWGCW
Logo of Microexon-tag DNA Seq NT60 Logo
Alignment of exons MSA
Microexon DNA seq TTTATCTAG
Microexon Amino Acid seq VYLG
Microexon-tag DNA Seq TGGGACAGTTCTTGCAGAGTAGAGGGACGTAGAAGGAAAGGGAAACAAGTTTATCTAGGAAGTTATGATACTGAGGAAAAAGCTGCCAGGGCCTATGATGTTGCTGCT
Microexon-tag Amino Acid Seq WDSSCRVEGRRRKGKQVYLGSYDTEEKAARAYDVAA
Microexon-tag spanning region58502835-58504507
Microexon-tag prediction score0.9388
Overlapped with the annotated transcript (%) 100
New Transcript ID KXG30761x
Reference Transcript ID KXG30761
Gene ID SORBI_3004G237100
Gene Name NA
Transcript ID KXG30761
Protein ID
Gene ID SORBI_3004G237100
Gene Name
Pfam domain motif AP2
Motif E-value 1.00E-11
Motif start 180
Motif end 237
Protein seq >KXG30761
MEESDVGVNPGKQMEEDKAAGVSGDEGKIERSHSINLNRAPTVAVEARSTQGNVETHGAVVSGTKDAGTGKAEQSSGDGQ
EKLPKCEQVDYESEIEGCVDDENPVKKAALVTLVGNEYCGGDDDERVQVLTIVKKDEPADDIGDCINPGTVAGYSEVKGA
VGASAATSAVRPAGSRSSSFHGVTRHRWSGKYEAHLWDSSCRVEGRRRKGKQVYLGSYDTEEKAARAYDVAAIKYWGGNT
RLNFPIEQYGKELEDIRDLSREECVTYLRRRSSCFSRGASIYRGVTRRQKDGRWQARIGLVAGTRDIYLGTFKTEEEAAE
AYDIAAIEIRGKNAVTNFDRSNYVDKGMHCIEGEGLRLLASKPEE*
CDS seq >KXG30761
ATGGAGGAATCGGACGTAGGAGTTAATCCTGGGAAGCAAATGGAAGAGGATAAGGCTGCGGGAGTATCGGGAGATGAGGG
TAAGATTGAGAGGAGTCACTCTATCAATCTGAATAGGGCGCCCACAGTTGCTGTGGAGGCGAGGAGCACTCAGGGGAATG
TTGAGACGCACGGCGCAGTGGTGTCGGGAACTAAGGATGCAGGCACCGGAAAGGCAGAGCAATCCAGTGGTGATGGTCAG
GAGAAGTTACCCAAGTGTGAGCAAGTCGACTACGAAAGTGAGATTGAAGGCTGTGTAGATGATGAGAACCCTGTCAAGAA
GGCTGCTTTAGTTACTTTGGTTGGAAATGAATATTGTGGTGGTGATGATGATGAGAGAGTTCAAGTGCTCACCATTGTCA
AGAAGGATGAACCTGCAGATGACATTGGCGACTGTATTAATCCTGGGACAGTTGCAGGGTACAGTGAAGTGAAGGGTGCT
GTAGGTGCTTCTGCCGCCACTTCTGCAGTGCGACCTGCTGGCTCCCGATCATCCAGTTTCCACGGTGTGACCAGGCATAG
ATGGAGTGGGAAATATGAAGCTCATTTGTGGGACAGTTCTTGCAGAGTAGAGGGACGTAGAAGGAAAGGGAAACAAGTTT
ATCTAGGAAGTTATGATACTGAGGAAAAAGCTGCCAGGGCCTATGATGTTGCTGCTATTAAATACTGGGGCGGAAATACC
AGACTAAACTTTCCGATTGAACAATATGGAAAGGAATTGGAGGACATAAGGGATTTGTCTCGAGAGGAATGTGTAACATA
CTTGAGAAGGAGGAGCAGCTGCTTTTCAAGAGGAGCTTCTATTTACAGAGGAGTGACAAGAAGGCAGAAAGATGGGAGAT
GGCAAGCACGCATAGGACTGGTTGCTGGAACTAGAGACATTTACCTGGGAACATTCAAAACGGAGGAAGAAGCTGCAGAG
GCTTATGATATTGCTGCAATTGAGATACGTGGCAAAAATGCTGTGACTAATTTTGACCGAAGCAACTATGTCGACAAGGG
TATGCACTGTATAGAAGGAGAAGGCTTGAGGCTGCTCGCATCCAAGCCAGAAGAATGA
Sb_4:58504364-58504372:+ does not have available information here.