Microexon ID Sb_3:70154883-70154891:-
Species Sorghum   Bicolor
Coordinates 3:70154883..70154891
Microexon Cluster ID MEP21
Size 9
Phase 1
Pfam Domain Motif AP2
Structure of Microexon-tag (flanking exon, microexon, flanking exon sizes) 49,9,50
Microexon location in the Microexon-tag 2
Microexon-tag DNA Seq TGGGAYAAYAGYWSYWGRARWGARRGYCARAVYARGAARGGAARRCAAGTTTAYYTRGGKGSWTATGAYRAKGARGARRMWGCWGCWMGRGCWTATGAYYTDGCWGCW
Logo of Microexon-tag DNA Seq NT60 Logo
Alignment of exons MSA
Microexon DNA seq TCTATTTAG
Microexon Amino Acid seq VYLG
Microexon-tag DNA Seq TGGGACAACAGTTGCAGAAGGGAAGGACAAACTCGCAAGGGTCGTCAAGTCTATTTAGGTGGCTATGATAAAGAGGAGAAAGCTGCTAGGGCTTATGATCTGGCTGCT
Microexon-tag Amino Acid Seq WDNSCRREGQTRKGRQVYLGGYDKEEKAARAYDLAA
Microexon-tag spanning region70154708-70155092
Microexon-tag prediction score0.9694
Overlapped with the annotated transcript (%) 100
New Transcript ID KXG33917x
Reference Transcript ID KXG33917
Gene ID SORBI_3003G390600
Gene Name NA
Transcript ID KXG33917
Protein ID
Gene ID SORBI_3003G390600
Gene Name
Pfam domain motif AP2
Motif E-value 1.80E-11
Motif start 278
Motif end 335
Protein seq >KXG33917
MATVNNWLAFSLSPQELPPTQTDSTLISAATTDDVSGDVCFNIPQDWSMRGSELSALVAEPKLEDFLGGISFSEQHHKAN
CNMIPSTSSTACYASSGATAGYHHQLYHQPTSSALHFADSVMVASSAGGVHDGGAMLSAASANGSAGAGAASANGSGSIG
LSMIKNWLRSQPAPMQPRVAAAESVQGLSLSMNMAGATQGAAGMPLLAGERGRAPESVSTSAQGGAVVTAPKEDSGGSGV
AATGALVAVSTDTGGSGASADNTARKTVDTFGQRTSIYRGVTRHRWTGRYEAHLWDNSCRREGQTRKGRQVYLGGYDKEE
KAARAYDLAALKYWGPTTTTNFPVNNYEKELEDMKHMTRQEFVASLRRKSSGFSRGASIYRGVTRHHQHGRWQARIGRVA
GNKDLYLGTFSTQEEAAEAYDIAAIKFRGLNAVTNFDMSRYDVKSILDSSALPIGSAAKRLKEAEAAASAQHHAGVVSYD
VGRIASQLGDGGALAAAYGAHYHGAWPTIAFQPSAATGLYHPYAQPMRGWCKQEQDHAVIAAAHSLQELHHLNLGAAAGA
HDFFSAGQQAAMHGLGSMDNASLEHSTGSNSVVYNGVGDSNGSTVVGSGGYMMPMSAATATATTAMVSHEQVHARAQGDH
HDEAKQAAQMGYESYLVNAENYGGGRMSAAWATVSAPPAASSNDNMADVGHGGAQLFSVWNDT*
CDS seq >KXG33917
ATGGCTACTGTGAACAACTGGCTCGCTTTCTCCCTCTCCCCGCAGGAGCTGCCGCCCACCCAGACGGACTCCACCCTCAT
CTCTGCCGCCACCACCGACGATGTCTCCGGCGATGTCTGCTTCAACATCCCCCAAGATTGGAGCATGAGGGGATCCGAGC
TTTCGGCGCTCGTCGCCGAGCCGAAGCTGGAGGACTTCCTCGGCGGAATCTCCTTCTCCGAGCAGCACCACAAGGCCAAC
TGCAACATGATCCCCAGCACTAGCAGCACAGCTTGCTACGCGAGCTCGGGTGCTACCGCCGGCTACCATCACCAGCTGTA
CCACCAGCCCACCAGCTCCGCGCTCCACTTCGCTGACTCCGTCATGGTGGCCTCCTCGGCCGGCGGCGTCCACGACGGAG
GTGCCATGCTCAGCGCGGCCAGCGCTAATGGTAGCGCTGGCGCTGGCGCTGCCAGTGCCAATGGCAGCGGCAGCATCGGG
CTGTCCATGATCAAGAACTGGCTGCGGAGCCAACCAGCTCCCATGCAGCCGAGGGTGGCGGCGGCTGAGAGCGTGCAGGG
GCTCTCTTTGTCCATGAACATGGCGGGGGCGACGCAAGGCGCCGCTGGCATGCCACTTCTTGCTGGAGAGCGCGGCCGGG
CGCCCGAGAGTGTCTCGACGTCGGCACAGGGTGGAGCCGTCGTCACGGCTCCAAAGGAGGATAGCGGTGGCAGCGGTGTT
GCCGCCACCGGCGCCCTAGTAGCCGTGAGCACGGACACGGGTGGCAGCGGCGCGTCGGCTGACAACACGGCAAGGAAGAC
GGTGGACACGTTCGGGCAGCGCACGTCGATTTACCGTGGCGTGACAAGGCATAGATGGACTGGGAGATATGAAGCACATC
TGTGGGACAACAGTTGCAGAAGGGAAGGACAAACTCGCAAGGGTCGTCAAGTCTATTTAGGTGGCTATGATAAAGAGGAG
AAAGCTGCTAGGGCTTATGATCTGGCTGCTCTTAAGTACTGGGGTCCCACGACAACAACAAATTTTCCAGTGAATAACTA
CGAAAAGGAGCTGGAGGATATGAAGCACATGACAAGGCAGGAGTTTGTAGCGTCTCTGAGAAGGAAGAGCAGTGGTTTCT
CCAGAGGTGCATCCATTTACAGGGGAGTGACTAGGCATCACCAGCATGGAAGATGGCAAGCACGGATTGGACGAGTTGCA
GGGAACAAGGATCTCTACTTGGGCACCTTCAGCACGCAGGAGGAGGCAGCGGAGGCATACGACATTGCGGCGATCAAGTT
CCGCGGCCTCAACGCCGTCACAAACTTCGACATGAGCCGCTACGACGTCAAGAGCATCCTGGACAGCAGTGCGCTCCCCA
TCGGCAGCGCCGCCAAGCGTCTCAAGGAGGCCGAGGCCGCCGCGTCCGCACAGCACCATGCCGGCGTGGTGAGCTACGAC
GTCGGCCGCATAGCCTCACAGCTCGGCGACGGCGGCGCCCTGGCGGCGGCGTACGGCGCGCACTACCATGGCGCCTGGCC
GACCATCGCGTTCCAGCCGAGCGCGGCCACGGGCCTGTACCACCCGTACGCGCAGCCGATGCGCGGGTGGTGCAAGCAGG
AGCAGGACCACGCGGTGATCGCGGCCGCGCACAGCCTGCAGGAGCTCCACCACCTGAACCTGGGTGCTGCCGCCGGCGCG
CACGACTTCTTCTCGGCGGGGCAGCAGGCGGCGATGCACGGCCTGGGTAGCATGGACAATGCATCACTCGAGCACAGCAC
CGGCTCCAACTCCGTCGTGTACAACGGTGTTGGTGATAGCAACGGCAGCACCGTCGTCGGCAGTGGTGGCTACATGATGC
CTATGAGCGCTGCCACGGCGACGGCTACCACGGCAATGGTGAGCCACGAGCAGGTGCATGCACGGGCACAGGGTGATCAC
CACGACGAAGCCAAGCAGGCTGCTCAGATGGGGTACGAGAGCTACCTGGTGAACGCAGAGAACTATGGCGGCGGGAGGAT
GTCTGCGGCCTGGGCGACTGTCTCAGCGCCACCGGCGGCAAGCAGCAACGATAACATGGCGGACGTCGGCCATGGCGGCG
CACAGCTCTTCAGTGTCTGGAACGATACTTAA
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