
Microexon ID | Sb_2:2065372-2065380:+ |
Species | Sorghum Bicolor | Coordinates | 2:2065372..2065380 |
Microexon Cluster ID | MEP21 |
Size | 9 |
Phase | 1 |
Pfam Domain Motif | AP2 |
Structure of Microexon-tag (flanking exon, microexon, flanking exon sizes) | 49,9,50 |
Microexon location in the Microexon-tag | 2 |
Microexon-tag DNA Seq | TGGGAYAAYAGYWSYWGRARWGARRGYCARAVYARGAARGGAARRCAAGTTTAYYTRGGKGSWTATGAYRAKGARGARRMWGCWGCWMGRGCWTATGAYYTDGCWGCW |
Logo of Microexon-tag DNA Seq | ![]() |
Alignment of exons | ![]() |
Microexon DNA seq | TTTATCTCG |
Microexon Amino Acid seq | VYLG |
Microexon-tag DNA Seq | TGGGACAACAGCTGCAAGAAGGAAGGCCAGACTAGGAAGGGCAGGCAAGTTTATCTCGGCGGGTACGACATGGAGGAGAAGGCGGCGAGAGCTTACGACCTTGCGGCG |
Microexon-tag Amino Acid Seq | WDNSCKKEGQTRKGRQVYLGGYDMEEKAARAYDLAA |
Microexon-tag spanning region | 2065100-2065634 |
Microexon-tag prediction score | 0.964 |
Overlapped with the annotated transcript (%) | 100 |
New Transcript ID | KXG34322x |
Reference Transcript ID | KXG34322 |
Gene ID | SORBI_3002G022600 |
Gene Name | NA |
Transcript ID | KXG34322 |
Protein ID | |
Gene ID | SORBI_3002G022600 |
Gene Name | |
Pfam domain motif | AP2 |
Motif E-value | 4.20E-12 |
Motif start | 286 |
Motif end | 344 |
Protein seq | >KXG34322 MTNNNGNGTNAAASSWLGFSLSPHMASAMDEHHHVQQQQQHHHHHSLFFPSVTAAAAAAYGLGGSDGGVATSASPYYTPQ LASMPLKSDGSLCIMEALRRSDQPDHHGPKLEDFLGAAAAQSQAMALSLQDNPAAAASSFYYYGNGGGGGSGHQHHGGFL QPCADLYGGPSEASLVADDDEAAAAATAMASWVAARAGESGGVLSAAAAAAGHQHHHHALALSMSSGSLSSCVTAHPGAA AADYGVVAATASASLDGGRKRGGAAGQKQPVHHRKSIDTFGQRTSQYRGVTRHRWTGRYEAHLWDNSCKKEGQTRKGRQV YLGGYDMEEKAARAYDLAALKYWGPSTHINFPLEDYQEELEEMKNMTRQEYVAHLRRKSSGFSRGASMYRGVTRHHQHGR WQARIGRVSGNKDLYLGTFSTQEEAAEAYDIAAIKFRGLNAVTNFDITRYDVDKIMASNTLLPGDLARRRKDDDPAAVIA GADASNGGGVTTAAAAAALVQQAAAAAAAGAGGNHSASSSETWIKVAAAAALQAAGAAPRDGNHHHHHHDVLSGEAFSVL HDLVVTAADGGNGNGNGGHHHHHVHNSAATAQHMSMSSASSLVTSLGNSREGSPDRGGGLSMLFSKPPAPAPAASAHAAN KPMSPLMPLGSWASTAAASARAAAAAVSIAHMPVFAAWTDA* |
CDS seq | >KXG34322 ATGACCAACAACAACGGCAATGGCACGAACGCGGCGGCGAGCAGCTGGCTAGGCTTCTCGCTGTCGCCTCACATGGCCTC CGCCATGGACGAGCACCACCACGTTCAGCAGCAACAGCAGCACCACCACCACCATAGCCTCTTCTTCCCTTCCGTCACTG CGGCGGCCGCCGCCGCCTACGGCCTCGGTGGCAGCGACGGCGGCGTGGCCACCAGCGCGTCGCCGTACTACACGCCGCAG CTGGCGTCCATGCCGCTCAAGTCCGACGGCTCCCTCTGCATCATGGAGGCGCTCCGGAGGAGCGATCAACCAGATCACCA TGGGCCCAAGCTCGAGGACTTCCTGGGCGCGGCGGCGGCGCAGTCGCAGGCCATGGCGCTGAGCCTGCAGGACAACCCCG CGGCGGCCGCCTCCAGCTTCTACTACTACGGCAACGGCGGGGGCGGCGGTTCGGGGCACCAGCACCACGGCGGGTTCCTG CAGCCGTGCGCCGACCTGTACGGCGGGCCCTCGGAGGCGTCCCTGGTGGCGGACGACGACGAGGCTGCGGCCGCCGCGAC GGCCATGGCGAGCTGGGTGGCGGCGCGCGCCGGCGAGAGCGGCGGCGTGCTGTCCGCTGCTGCTGCCGCGGCCGGGCACC AGCACCACCACCACGCGCTGGCCCTGTCCATGAGCTCCGGGTCGCTGTCGAGCTGCGTGACCGCGCACCCCGGCGCCGCC GCCGCCGACTATGGCGTGGTGGCGGCCACCGCGTCGGCGTCGCTGGATGGCGGGCGCAAGCGCGGCGGCGCGGCGGGGCA GAAGCAGCCCGTGCACCACCGCAAGTCCATCGACACGTTCGGGCAGAGGACGTCGCAGTACCGCGGCGTCACCAGGCATA GGTGGACAGGGAGGTATGAGGCACACCTGTGGGACAACAGCTGCAAGAAGGAAGGCCAGACTAGGAAGGGCAGGCAAGTT TATCTCGGCGGGTACGACATGGAGGAGAAGGCGGCGAGAGCTTACGACCTTGCGGCGCTCAAGTACTGGGGCCCTTCCAC GCACATCAACTTCCCGCTGGAGGACTACCAGGAGGAGCTGGAGGAGATGAAGAACATGACACGGCAGGAGTACGTGGCTC ACCTCAGGAGGAAGAGCAGCGGCTTCTCACGGGGCGCGTCGATGTACCGAGGAGTCACAAGGCACCACCAGCACGGGCGT TGGCAGGCGCGCATCGGCCGCGTCTCCGGCAACAAGGACCTCTACCTCGGCACCTTCAGCACGCAGGAGGAGGCGGCGGA GGCGTACGACATCGCGGCGATCAAGTTCCGGGGGCTCAACGCCGTCACCAACTTCGACATCACGCGCTACGACGTCGACA AGATCATGGCCAGCAACACGCTGCTGCCGGGCGACCTCGCGCGCCGCAGGAAGGACGACGACCCGGCTGCCGTCATCGCC GGCGCCGACGCCAGCAACGGCGGCGGCGTCACGACCGCGGCGGCGGCGGCCGCCCTGGTGCAGCAGGCTGCTGCTGCCGC TGCCGCTGGCGCCGGTGGCAACCACAGCGCCAGCTCCAGCGAGACGTGGATCAAGGTGGCCGCGGCGGCTGCGCTGCAGG CCGCTGGTGCCGCGCCGAGGGATGGAAACCACCACCACCACCACCACGACGTGCTCTCCGGCGAGGCCTTCTCCGTGCTG CACGACCTGGTGGTCACCGCCGCGGATGGCGGCAACGGCAACGGCAACGGCGGACACCACCACCACCACGTCCACAACAG CGCAGCCACCGCGCAGCACATGTCCATGTCCAGCGCGTCGTCGCTCGTCACCAGCCTCGGCAACTCCCGGGAGGGCAGCC CCGACCGCGGCGGCGGCCTGTCCATGCTCTTCTCCAAGCCGCCGGCTCCAGCACCAGCAGCCTCGGCGCACGCCGCCAAC AAGCCGATGAGCCCGCTCATGCCGCTTGGCTCCTGGGCGTCCACGGCGGCGGCGTCCGCCAGGGCCGCCGCCGCCGCCGT CTCCATCGCGCACATGCCCGTCTTCGCCGCCTGGACCGACGCCTGA |
Sb_2:2065372-2065380:+ does not have available information here.