Microexon ID Sb_2:2065372-2065380:+
Species Sorghum   Bicolor
Coordinates 2:2065372..2065380
Microexon Cluster ID MEP21
Size 9
Phase 1
Pfam Domain Motif AP2
Structure of Microexon-tag (flanking exon, microexon, flanking exon sizes) 49,9,50
Microexon location in the Microexon-tag 2
Microexon-tag DNA Seq TGGGAYAAYAGYWSYWGRARWGARRGYCARAVYARGAARGGAARRCAAGTTTAYYTRGGKGSWTATGAYRAKGARGARRMWGCWGCWMGRGCWTATGAYYTDGCWGCW
Logo of Microexon-tag DNA Seq NT60 Logo
Alignment of exons MSA
Microexon DNA seq TTTATCTCG
Microexon Amino Acid seq VYLG
Microexon-tag DNA Seq TGGGACAACAGCTGCAAGAAGGAAGGCCAGACTAGGAAGGGCAGGCAAGTTTATCTCGGCGGGTACGACATGGAGGAGAAGGCGGCGAGAGCTTACGACCTTGCGGCG
Microexon-tag Amino Acid Seq WDNSCKKEGQTRKGRQVYLGGYDMEEKAARAYDLAA
Microexon-tag spanning region2065100-2065634
Microexon-tag prediction score0.964
Overlapped with the annotated transcript (%) 100
New Transcript ID KXG34322x
Reference Transcript ID KXG34322
Gene ID SORBI_3002G022600
Gene Name NA
Transcript ID KXG34322
Protein ID
Gene ID SORBI_3002G022600
Gene Name
Pfam domain motif AP2
Motif E-value 4.20E-12
Motif start 286
Motif end 344
Protein seq >KXG34322
MTNNNGNGTNAAASSWLGFSLSPHMASAMDEHHHVQQQQQHHHHHSLFFPSVTAAAAAAYGLGGSDGGVATSASPYYTPQ
LASMPLKSDGSLCIMEALRRSDQPDHHGPKLEDFLGAAAAQSQAMALSLQDNPAAAASSFYYYGNGGGGGSGHQHHGGFL
QPCADLYGGPSEASLVADDDEAAAAATAMASWVAARAGESGGVLSAAAAAAGHQHHHHALALSMSSGSLSSCVTAHPGAA
AADYGVVAATASASLDGGRKRGGAAGQKQPVHHRKSIDTFGQRTSQYRGVTRHRWTGRYEAHLWDNSCKKEGQTRKGRQV
YLGGYDMEEKAARAYDLAALKYWGPSTHINFPLEDYQEELEEMKNMTRQEYVAHLRRKSSGFSRGASMYRGVTRHHQHGR
WQARIGRVSGNKDLYLGTFSTQEEAAEAYDIAAIKFRGLNAVTNFDITRYDVDKIMASNTLLPGDLARRRKDDDPAAVIA
GADASNGGGVTTAAAAAALVQQAAAAAAAGAGGNHSASSSETWIKVAAAAALQAAGAAPRDGNHHHHHHDVLSGEAFSVL
HDLVVTAADGGNGNGNGGHHHHHVHNSAATAQHMSMSSASSLVTSLGNSREGSPDRGGGLSMLFSKPPAPAPAASAHAAN
KPMSPLMPLGSWASTAAASARAAAAAVSIAHMPVFAAWTDA*
CDS seq >KXG34322
ATGACCAACAACAACGGCAATGGCACGAACGCGGCGGCGAGCAGCTGGCTAGGCTTCTCGCTGTCGCCTCACATGGCCTC
CGCCATGGACGAGCACCACCACGTTCAGCAGCAACAGCAGCACCACCACCACCATAGCCTCTTCTTCCCTTCCGTCACTG
CGGCGGCCGCCGCCGCCTACGGCCTCGGTGGCAGCGACGGCGGCGTGGCCACCAGCGCGTCGCCGTACTACACGCCGCAG
CTGGCGTCCATGCCGCTCAAGTCCGACGGCTCCCTCTGCATCATGGAGGCGCTCCGGAGGAGCGATCAACCAGATCACCA
TGGGCCCAAGCTCGAGGACTTCCTGGGCGCGGCGGCGGCGCAGTCGCAGGCCATGGCGCTGAGCCTGCAGGACAACCCCG
CGGCGGCCGCCTCCAGCTTCTACTACTACGGCAACGGCGGGGGCGGCGGTTCGGGGCACCAGCACCACGGCGGGTTCCTG
CAGCCGTGCGCCGACCTGTACGGCGGGCCCTCGGAGGCGTCCCTGGTGGCGGACGACGACGAGGCTGCGGCCGCCGCGAC
GGCCATGGCGAGCTGGGTGGCGGCGCGCGCCGGCGAGAGCGGCGGCGTGCTGTCCGCTGCTGCTGCCGCGGCCGGGCACC
AGCACCACCACCACGCGCTGGCCCTGTCCATGAGCTCCGGGTCGCTGTCGAGCTGCGTGACCGCGCACCCCGGCGCCGCC
GCCGCCGACTATGGCGTGGTGGCGGCCACCGCGTCGGCGTCGCTGGATGGCGGGCGCAAGCGCGGCGGCGCGGCGGGGCA
GAAGCAGCCCGTGCACCACCGCAAGTCCATCGACACGTTCGGGCAGAGGACGTCGCAGTACCGCGGCGTCACCAGGCATA
GGTGGACAGGGAGGTATGAGGCACACCTGTGGGACAACAGCTGCAAGAAGGAAGGCCAGACTAGGAAGGGCAGGCAAGTT
TATCTCGGCGGGTACGACATGGAGGAGAAGGCGGCGAGAGCTTACGACCTTGCGGCGCTCAAGTACTGGGGCCCTTCCAC
GCACATCAACTTCCCGCTGGAGGACTACCAGGAGGAGCTGGAGGAGATGAAGAACATGACACGGCAGGAGTACGTGGCTC
ACCTCAGGAGGAAGAGCAGCGGCTTCTCACGGGGCGCGTCGATGTACCGAGGAGTCACAAGGCACCACCAGCACGGGCGT
TGGCAGGCGCGCATCGGCCGCGTCTCCGGCAACAAGGACCTCTACCTCGGCACCTTCAGCACGCAGGAGGAGGCGGCGGA
GGCGTACGACATCGCGGCGATCAAGTTCCGGGGGCTCAACGCCGTCACCAACTTCGACATCACGCGCTACGACGTCGACA
AGATCATGGCCAGCAACACGCTGCTGCCGGGCGACCTCGCGCGCCGCAGGAAGGACGACGACCCGGCTGCCGTCATCGCC
GGCGCCGACGCCAGCAACGGCGGCGGCGTCACGACCGCGGCGGCGGCGGCCGCCCTGGTGCAGCAGGCTGCTGCTGCCGC
TGCCGCTGGCGCCGGTGGCAACCACAGCGCCAGCTCCAGCGAGACGTGGATCAAGGTGGCCGCGGCGGCTGCGCTGCAGG
CCGCTGGTGCCGCGCCGAGGGATGGAAACCACCACCACCACCACCACGACGTGCTCTCCGGCGAGGCCTTCTCCGTGCTG
CACGACCTGGTGGTCACCGCCGCGGATGGCGGCAACGGCAACGGCAACGGCGGACACCACCACCACCACGTCCACAACAG
CGCAGCCACCGCGCAGCACATGTCCATGTCCAGCGCGTCGTCGCTCGTCACCAGCCTCGGCAACTCCCGGGAGGGCAGCC
CCGACCGCGGCGGCGGCCTGTCCATGCTCTTCTCCAAGCCGCCGGCTCCAGCACCAGCAGCCTCGGCGCACGCCGCCAAC
AAGCCGATGAGCCCGCTCATGCCGCTTGGCTCCTGGGCGTCCACGGCGGCGGCGTCCGCCAGGGCCGCCGCCGCCGCCGT
CTCCATCGCGCACATGCCCGTCTTCGCCGCCTGGACCGACGCCTGA
Sb_2:2065372-2065380:+ does not have available information here.