
Microexon ID | Sb_1:72532767-72532775:- |
Species | Sorghum Bicolor | Coordinates | 1:72532767..72532775 |
Microexon Cluster ID | MEP21 |
Size | 9 |
Phase | 1 |
Pfam Domain Motif | AP2 |
Structure of Microexon-tag (flanking exon, microexon, flanking exon sizes) | 49,9,50 |
Microexon location in the Microexon-tag | 2 |
Microexon-tag DNA Seq | TGGGAYAAYAGYWSYWGRARWGARRGYCARAVYARGAARGGAARRCAAGTTTAYYTRGGKGSWTATGAYRAKGARGARRMWGCWGCWMGRGCWTATGAYYTDGCWGCW |
Logo of Microexon-tag DNA Seq | ![]() |
Alignment of exons | ![]() |
Microexon DNA seq | TATATCTAG |
Microexon Amino Acid seq | VYLG |
Microexon-tag DNA Seq | TGGGACAACAGCTGCAGAAAGGATGGGCAGACTAGGAAAGGCAGACAAGTATATCTAGGTGGTTATGACACCGAAGACAAGGCCGCGAGGGCTTATGATCTGGCTGCT |
Microexon-tag Amino Acid Seq | WDNSCRKDGQTRKGRQVYLGGYDTEDKAARAYDLAA |
Microexon-tag spanning region | 72532604-72532971 |
Microexon-tag prediction score | 0.9688 |
Overlapped with the annotated transcript (%) | 100 |
New Transcript ID | KXG39831x |
Reference Transcript ID | KXG39831 |
Gene ID | SORBI_3001G448000 |
Gene Name | NA |
Transcript ID | KXG39831 |
Protein ID | |
Gene ID | SORBI_3001G448000 |
Gene Name | |
Pfam domain motif | AP2 |
Motif E-value | 5.70E-12 |
Motif start | 274 |
Motif end | 333 |
Protein seq | >KXG39831 MASGSNWLGFSLSPQTAVEVPSASEPAPAHHAPPDPSSTMISSSSTNNATTSNFLFSPMAAPYPGYYCVGGAYGDGTSAA GVYYSHLPAMPIKSDGTLCNIEGMMPSSPPKLEDFLGGGNGGGQETATYYSHGQEEGASRDYRQYQHHQLVPYNFQHLTE AEMLQEDAAPMEEAMAAAKNFLLTSYGACYSNGEMHPLSLSMMSPGSQSSSCVGAAPQQQLAAVATASAAAAAQGRSNGD GEQCVGRKRGTGKGGHKQQPVHRKSIDTFGQRTSRYRGVTRHRWTGRYEAHLWDNSCRKDGQTRKGRQVYLGGYDTEDKA ARAYDLAALKYWGPATHINFPVENYRDELEVMKGMTRQEYVAHLRRRSSGFSRGASIYRGVTRHHQQGRWQSRIGRVAGN KDLYLGTFTTQEEAAEAYDIAAIKFRGLNAVTNFDITRYDVDKIMESNTLLPAEEARKVKAIEAANNAPMMQHNGGRELN PAEETSAAWRMVLHGSPQEAVHCPEAVDLQRAIMSNDSQHPSLHGIVGLDHHLGVPGKTSGSINFSNSSSQVTSLGNSRE GSPERLGLAMLYGKQPSAVSLATMSPWMPMAAQTVAQVLKQPNVVSHLPVFAAWADA* |
CDS seq | >KXG39831 ATGGCTAGTGGCAGCAACTGGCTAGGCTTCTCCCTCTCCCCGCAAACGGCCGTGGAGGTGCCCTCCGCTTCTGAACCCGC TCCTGCCCATCACGCTCCACCTGATCCTTCCAGTACTATGATCTCCTCTTCCAGTACCAACAACGCCACCACTTCCAACT TCCTCTTCTCACCGATGGCCGCTCCCTATCCTGGTTACTACTGTGTGGGCGGCGCGTATGGCGATGGCACCAGTGCTGCC GGCGTCTACTACTCCCACTTGCCTGCTATGCCCATCAAGTCCGACGGCACCCTCTGCAACATCGAAGGCATGATGCCGTC GTCCCCGCCGAAGCTAGAGGACTTCTTGGGCGGTGGCAATGGCGGTGGTCAAGAAACGGCCACCTACTACAGCCACGGCC AGGAAGAGGGGGCGAGCAGGGATTACCGCCAGTACCAGCACCACCAGCTCGTCCCCTACAACTTCCAGCATCTGACGGAA GCAGAGATGCTCCAAGAAGACGCGGCGCCAATGGAGGAGGCGATGGCGGCGGCCAAGAACTTCCTCCTGACGAGCTACGG CGCTTGCTACAGCAACGGGGAGATGCACCCTCTGAGCCTGTCGATGATGAGCCCCGGGTCCCAGTCGAGCAGCTGCGTCG GTGCGGCTCCGCAGCAGCAGCTGGCCGCTGTAGCCACTGCTTCCGCGGCGGCCGCAGCCCAGGGGCGCAGTAATGGCGAT GGTGAGCAGTGCGTCGGGAGGAAGAGAGGCACCGGGAAGGGAGGCCACAAGCAGCAGCCGGTGCACCGCAAGTCCATCGA CACGTTTGGGCAGAGAACCTCCCGTTACAGGGGCGTCACCAGGCACAGGTGGACTGGGAGATATGAAGCCCACCTCTGGG ACAACAGCTGCAGAAAGGATGGGCAGACTAGGAAAGGCAGACAAGTATATCTAGGTGGTTATGACACCGAAGACAAGGCC GCGAGGGCTTATGATCTGGCTGCTCTGAAATATTGGGGTCCAGCTACTCACATCAATTTCCCCGTAGAGAACTATCGAGA TGAACTTGAGGTGATGAAAGGCATGACAAGGCAAGAATATGTTGCGCATTTGAGAAGGAGAAGCAGTGGATTTTCTCGAG GCGCTTCCATCTACCGAGGAGTGACAAGGCATCACCAGCAAGGAAGATGGCAGTCTCGGATTGGAAGGGTTGCTGGAAAC AAGGATCTATACCTCGGCACTTTCACCACTCAAGAAGAAGCAGCTGAGGCTTACGACATAGCTGCCATCAAGTTCCGTGG CTTGAACGCGGTGACGAACTTCGACATAACAAGATACGACGTCGACAAGATCATGGAGAGCAACACGCTGCTGCCCGCGG AGGAAGCACGCAAGGTCAAGGCGATCGAGGCGGCTAACAATGCTCCTATGATGCAGCACAACGGTGGCAGGGAGCTCAAC CCAGCCGAGGAAACAAGCGCAGCCTGGAGGATGGTGCTCCATGGTTCTCCCCAGGAAGCTGTGCATTGCCCAGAAGCAGT TGATCTCCAGAGGGCAATCATGAGCAACGACTCTCAGCATCCCTCCCTGCATGGCATCGTTGGACTTGATCATCACCTCG GCGTTCCTGGCAAGACGTCTGGGAGCATCAATTTCTCCAACTCGTCCTCGCAGGTGACAAGCCTGGGAAACTCCAGGGAG GGGAGCCCCGAGAGGCTGGGCCTGGCCATGCTCTACGGCAAGCAGCCGAGCGCCGTAAGCCTGGCCACCATGAGCCCCTG GATGCCGATGGCGGCACAGACAGTGGCCCAAGTGCTGAAGCAGCCGAACGTCGTCTCTCATCTGCCTGTCTTTGCCGCTT GGGCAGATGCCTAG |
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