Microexon ID Sb_1:72532767-72532775:-
Species Sorghum   Bicolor
Coordinates 1:72532767..72532775
Microexon Cluster ID MEP21
Size 9
Phase 1
Pfam Domain Motif AP2
Structure of Microexon-tag (flanking exon, microexon, flanking exon sizes) 49,9,50
Microexon location in the Microexon-tag 2
Microexon-tag DNA Seq TGGGAYAAYAGYWSYWGRARWGARRGYCARAVYARGAARGGAARRCAAGTTTAYYTRGGKGSWTATGAYRAKGARGARRMWGCWGCWMGRGCWTATGAYYTDGCWGCW
Logo of Microexon-tag DNA Seq NT60 Logo
Alignment of exons MSA
Microexon DNA seq TATATCTAG
Microexon Amino Acid seq VYLG
Microexon-tag DNA Seq TGGGACAACAGCTGCAGAAAGGATGGGCAGACTAGGAAAGGCAGACAAGTATATCTAGGTGGTTATGACACCGAAGACAAGGCCGCGAGGGCTTATGATCTGGCTGCT
Microexon-tag Amino Acid Seq WDNSCRKDGQTRKGRQVYLGGYDTEDKAARAYDLAA
Microexon-tag spanning region72532604-72532971
Microexon-tag prediction score0.9688
Overlapped with the annotated transcript (%) 100
New Transcript ID KXG39831x
Reference Transcript ID KXG39831
Gene ID SORBI_3001G448000
Gene Name NA
Transcript ID KXG39831
Protein ID
Gene ID SORBI_3001G448000
Gene Name
Pfam domain motif AP2
Motif E-value 5.70E-12
Motif start 274
Motif end 333
Protein seq >KXG39831
MASGSNWLGFSLSPQTAVEVPSASEPAPAHHAPPDPSSTMISSSSTNNATTSNFLFSPMAAPYPGYYCVGGAYGDGTSAA
GVYYSHLPAMPIKSDGTLCNIEGMMPSSPPKLEDFLGGGNGGGQETATYYSHGQEEGASRDYRQYQHHQLVPYNFQHLTE
AEMLQEDAAPMEEAMAAAKNFLLTSYGACYSNGEMHPLSLSMMSPGSQSSSCVGAAPQQQLAAVATASAAAAAQGRSNGD
GEQCVGRKRGTGKGGHKQQPVHRKSIDTFGQRTSRYRGVTRHRWTGRYEAHLWDNSCRKDGQTRKGRQVYLGGYDTEDKA
ARAYDLAALKYWGPATHINFPVENYRDELEVMKGMTRQEYVAHLRRRSSGFSRGASIYRGVTRHHQQGRWQSRIGRVAGN
KDLYLGTFTTQEEAAEAYDIAAIKFRGLNAVTNFDITRYDVDKIMESNTLLPAEEARKVKAIEAANNAPMMQHNGGRELN
PAEETSAAWRMVLHGSPQEAVHCPEAVDLQRAIMSNDSQHPSLHGIVGLDHHLGVPGKTSGSINFSNSSSQVTSLGNSRE
GSPERLGLAMLYGKQPSAVSLATMSPWMPMAAQTVAQVLKQPNVVSHLPVFAAWADA*
CDS seq >KXG39831
ATGGCTAGTGGCAGCAACTGGCTAGGCTTCTCCCTCTCCCCGCAAACGGCCGTGGAGGTGCCCTCCGCTTCTGAACCCGC
TCCTGCCCATCACGCTCCACCTGATCCTTCCAGTACTATGATCTCCTCTTCCAGTACCAACAACGCCACCACTTCCAACT
TCCTCTTCTCACCGATGGCCGCTCCCTATCCTGGTTACTACTGTGTGGGCGGCGCGTATGGCGATGGCACCAGTGCTGCC
GGCGTCTACTACTCCCACTTGCCTGCTATGCCCATCAAGTCCGACGGCACCCTCTGCAACATCGAAGGCATGATGCCGTC
GTCCCCGCCGAAGCTAGAGGACTTCTTGGGCGGTGGCAATGGCGGTGGTCAAGAAACGGCCACCTACTACAGCCACGGCC
AGGAAGAGGGGGCGAGCAGGGATTACCGCCAGTACCAGCACCACCAGCTCGTCCCCTACAACTTCCAGCATCTGACGGAA
GCAGAGATGCTCCAAGAAGACGCGGCGCCAATGGAGGAGGCGATGGCGGCGGCCAAGAACTTCCTCCTGACGAGCTACGG
CGCTTGCTACAGCAACGGGGAGATGCACCCTCTGAGCCTGTCGATGATGAGCCCCGGGTCCCAGTCGAGCAGCTGCGTCG
GTGCGGCTCCGCAGCAGCAGCTGGCCGCTGTAGCCACTGCTTCCGCGGCGGCCGCAGCCCAGGGGCGCAGTAATGGCGAT
GGTGAGCAGTGCGTCGGGAGGAAGAGAGGCACCGGGAAGGGAGGCCACAAGCAGCAGCCGGTGCACCGCAAGTCCATCGA
CACGTTTGGGCAGAGAACCTCCCGTTACAGGGGCGTCACCAGGCACAGGTGGACTGGGAGATATGAAGCCCACCTCTGGG
ACAACAGCTGCAGAAAGGATGGGCAGACTAGGAAAGGCAGACAAGTATATCTAGGTGGTTATGACACCGAAGACAAGGCC
GCGAGGGCTTATGATCTGGCTGCTCTGAAATATTGGGGTCCAGCTACTCACATCAATTTCCCCGTAGAGAACTATCGAGA
TGAACTTGAGGTGATGAAAGGCATGACAAGGCAAGAATATGTTGCGCATTTGAGAAGGAGAAGCAGTGGATTTTCTCGAG
GCGCTTCCATCTACCGAGGAGTGACAAGGCATCACCAGCAAGGAAGATGGCAGTCTCGGATTGGAAGGGTTGCTGGAAAC
AAGGATCTATACCTCGGCACTTTCACCACTCAAGAAGAAGCAGCTGAGGCTTACGACATAGCTGCCATCAAGTTCCGTGG
CTTGAACGCGGTGACGAACTTCGACATAACAAGATACGACGTCGACAAGATCATGGAGAGCAACACGCTGCTGCCCGCGG
AGGAAGCACGCAAGGTCAAGGCGATCGAGGCGGCTAACAATGCTCCTATGATGCAGCACAACGGTGGCAGGGAGCTCAAC
CCAGCCGAGGAAACAAGCGCAGCCTGGAGGATGGTGCTCCATGGTTCTCCCCAGGAAGCTGTGCATTGCCCAGAAGCAGT
TGATCTCCAGAGGGCAATCATGAGCAACGACTCTCAGCATCCCTCCCTGCATGGCATCGTTGGACTTGATCATCACCTCG
GCGTTCCTGGCAAGACGTCTGGGAGCATCAATTTCTCCAACTCGTCCTCGCAGGTGACAAGCCTGGGAAACTCCAGGGAG
GGGAGCCCCGAGAGGCTGGGCCTGGCCATGCTCTACGGCAAGCAGCCGAGCGCCGTAAGCCTGGCCACCATGAGCCCCTG
GATGCCGATGGCGGCACAGACAGTGGCCCAAGTGCTGAAGCAGCCGAACGTCGTCTCTCATCTGCCTGTCTTTGCCGCTT
GGGCAGATGCCTAG
Sb_1:72532767-72532775:- does not have available information here.