Microexon ID Sb_1:5776301-5776309:-
Species Sorghum   Bicolor
Coordinates 1:5776301..5776309
Microexon Cluster ID MEP21
Size 9
Phase 1
Pfam Domain Motif AP2
Structure of Microexon-tag (flanking exon, microexon, flanking exon sizes) 49,9,50
Microexon location in the Microexon-tag 2
Microexon-tag DNA Seq TGGGAYAAYAGYWSYWGRARWGARRGYCARAVYARGAARGGAARRCAAGTTTAYYTRGGKGSWTATGAYRAKGARGARRMWGCWGCWMGRGCWTATGAYYTDGCWGCW
Logo of Microexon-tag DNA Seq NT60 Logo
Alignment of exons MSA
Microexon DNA seq TTTATCTCG
Microexon Amino Acid seq VYLG
Microexon-tag DNA Seq TGGGACAACAGCTGCAGGAAGGAAGGCCAGGCCCGGAAAGGCCGGCAAGTTTATCTCGGCGGGTATGACATGGAGGAGAAGGCCGCGAGGGCGTATGACCTGGCCGCG
Microexon-tag Amino Acid Seq WDNSCRKEGQARKGRQVYLGGYDMEEKAARAYDLAA
Microexon-tag spanning region5776116-5776539
Microexon-tag prediction score0.9607
Overlapped with the annotated transcript (%) 100
New Transcript ID EER93382x
Reference Transcript ID EER93382
Gene ID SORBI_3001G075700
Gene Name NA
Transcript ID EER93382
Protein ID
Gene ID SORBI_3001G075700
Gene Name
Pfam domain motif AP2
Motif E-value 2.40E-11
Motif start 298
Motif end 357
Protein seq >EER93382
MTSNSSQNISSCSTGGSDAAVGSSWLGFSLSPHMAATMDGGAADGSRGVPGQQPHGGLCYPPVVCSSPAPFGYALGGGGQ
DCPANGGGGFYPGLSSMPLNSDGSLCIVEALHRSEQERHGVMVSPKLEDFLGASTAMALSLDSSSFYYGGGHGHHAHGDG
HGHDQGGYLQPLQCAVIPSSGGHDVYGGHSHLVDQQSAVAMAESWFSARGGGYDVNGGGAGDIVPLQGHTHPLALSMSSG
TGSQSSSITMQVGAHADAVTEYVATDGSKKRGGGGGNAGQKQAVVHRKSIDTFGQRTSKYRGVTRHRWTGRYEAHLWDNS
CRKEGQARKGRQVYLGGYDMEEKAARAYDLAALKYWGKSTHVNFPVEDYREELEEMENMTRQEYVAHLRRKSSGFSRGAS
IYRGVTRHHQHGRWQARIGRVSGNKDLYLGTFTNQEEAAEAYDVAAIKFRGLSAVTNFDITRYDVEKIMESNTLLPGDQV
RRKMDGQAASAVSEADAVASATAALVQAGGRCVADTWKIQAAALPAVARGGGGGHEQQQQHQDLLSSEAFSLLHDILSVD
AAGTGSGSANAHMSNSSSLAPSVSNSREQSPDRGSGGLAMFFAKPAAAVPRLACPLPLGSWVSPSAVSSARPGVSIAHLP
MFAAWTDA*
CDS seq >EER93382
ATGACCAGCAACAGCAGCCAGAACATCAGCAGCTGCAGCACCGGCGGAAGCGACGCCGCGGTCGGGAGCAGCTGGCTCGG
CTTCTCGCTGTCGCCTCACATGGCGGCGACCATGGACGGCGGCGCGGCCGACGGCTCCAGAGGCGTTCCGGGGCAGCAGC
CCCACGGAGGCCTCTGCTACCCTCCGGTCGTCTGCTCCTCGCCCGCGCCCTTCGGCTACGCTCTCGGCGGCGGCGGCCAA
GATTGTCCCGCCAATGGTGGCGGGGGTTTCTACCCCGGGCTCTCCTCTATGCCGCTCAACTCCGACGGCTCCCTGTGCAT
CGTGGAGGCCCTCCATAGGAGCGAGCAAGAACGTCACGGTGTGATGGTGTCCCCAAAGCTGGAGGATTTCTTGGGGGCGA
GCACCGCGATGGCGCTGAGCTTGGACAGCTCCAGCTTCTACTACGGCGGCGGTCACGGCCACCACGCGCACGGTGACGGT
CACGGCCATGACCAAGGCGGCTACCTACAGCCGCTGCAGTGCGCCGTGATCCCCAGTTCCGGTGGGCACGACGTGTACGG
CGGACACAGTCATCTGGTGGACCAGCAGTCCGCCGTGGCAATGGCGGAGAGCTGGTTCTCAGCCCGCGGCGGCGGCTACG
ACGTCAACGGCGGCGGCGCGGGCGACATCGTGCCGCTGCAGGGCCACACGCACCCGCTGGCCCTTTCCATGAGCTCCGGG
ACGGGGTCGCAGTCCAGCAGCATCACCATGCAAGTCGGCGCCCACGCCGACGCCGTCACCGAGTACGTCGCCACGGACGG
GAGCAAGAAGCGCGGCGGCGGCGGCGGCAACGCCGGGCAGAAGCAGGCCGTCGTCCACCGCAAGTCCATCGACACATTCG
GGCAGCGCACGTCCAAGTACCGCGGCGTCACCAGGCATAGGTGGACGGGGAGGTATGAGGCGCACCTCTGGGACAACAGC
TGCAGGAAGGAAGGCCAGGCCCGGAAAGGCCGGCAAGTTTATCTCGGCGGGTATGACATGGAGGAGAAGGCCGCGAGGGC
GTATGACCTGGCCGCGCTCAAGTACTGGGGCAAATCCACGCACGTAAATTTCCCGGTCGAGGACTACAGGGAAGAGCTGG
AGGAGATGGAGAACATGACCAGGCAGGAGTACGTCGCTCACCTGAGAAGGAAAAGCAGCGGCTTCTCGCGCGGCGCTTCC
ATCTACCGGGGAGTGACCAGGCATCACCAGCACGGGCGGTGGCAGGCGCGCATCGGCCGCGTCTCGGGCAACAAGGACCT
CTACCTGGGAACATTCACCAATCAGGAGGAGGCGGCGGAGGCGTACGACGTGGCGGCCATCAAGTTCCGGGGCCTCAGCG
CCGTCACCAACTTCGACATCACGCGGTACGACGTCGAGAAGATCATGGAGAGTAACACGCTGCTCCCGGGCGACCAGGTC
CGGCGCAAGATGGATGGCCAGGCCGCCTCCGCGGTCTCGGAGGCCGACGCCGTAGCCAGCGCCACCGCGGCGCTGGTGCA
GGCCGGCGGCCGCTGCGTGGCGGACACCTGGAAGATCCAGGCAGCGGCGCTGCCAGCAGTCGCGCGGGGCGGCGGCGGCG
GCCATGAGCAGCAGCAGCAGCACCAGGACCTGCTGTCGAGCGAGGCGTTCTCGCTGCTGCACGACATCCTGTCCGTGGAC
GCTGCTGGGACGGGGAGCGGCAGTGCCAACGCGCACATGTCGAACTCGTCTTCGCTGGCTCCCAGCGTGAGCAACTCCCG
GGAGCAGAGCCCGGACCGGGGCAGCGGCGGCCTCGCCATGTTCTTCGCCAAGCCCGCGGCCGCGGTGCCCAGGCTGGCCT
GCCCGCTGCCGCTGGGATCCTGGGTCTCGCCGTCGGCCGTGTCCTCCGCCAGGCCCGGCGTGTCCATCGCGCACCTGCCG
ATGTTCGCCGCGTGGACCGACGCATGA
Sb_1:5776301-5776309:- does not have available information here.