| Microexon ID | Pt_6:18653314-18653322:- |
| Species | Populus Trichocarpa | Coordinates | 6:18653314..18653322 |
| Microexon Cluster ID | MEP21 |
| Size | 9 |
| Phase | 1 |
| Pfam Domain Motif | AP2 |
| Structure of Microexon-tag (flanking exon, microexon, flanking exon sizes) | 49,9,50 |
| Microexon location in the Microexon-tag | 2 |
| Microexon-tag DNA Seq | TGGGAYAAYAGYWSYWGRARWGARRGYCARAVYARGAARGGAARRCAAGTTTAYYTRGGKGSWTATGAYRAKGARGARRMWGCWGCWMGRGCWTATGAYYTDGCWGCW |
| Logo of Microexon-tag DNA Seq |  |
| Alignment of exons |  |
| Microexon DNA seq | TCTACCTTG |
| Microexon Amino Acid seq | VYLG |
| Microexon-tag DNA Seq | TGGGATAAGAATTGCTGGAATGAATCACAAAACAAGAAAGGACGACAAGTCTACCTTGGTGCCTATGATGACGAAGAAGTTGCAGCACATGCCTATGACTTAGCGGCA |
| Microexon-tag Amino Acid Seq | WDKNCWNESQNKKGRQVYLGAYDDEEVAAHAYDLAA |
| Microexon-tag spanning region | 18653135-18653531 |
| Microexon-tag prediction score | 0.9507 |
| Overlapped with the annotated transcript (%) | 100 |
| New Transcript ID | Potri.006G179900.2.v4.1x |
| Reference Transcript ID | Potri.006G179900.2.v4.1 |
| Gene ID | Potri.006G179900.v4.1 |
| Gene Name | NA |
| Transcript ID | Potri.006G179900.2.v4.1 |
| Protein ID | |
| Gene ID | Potri.006G179900.v4.1 |
| Gene Name | |
| Pfam domain motif | AP2 |
| Motif E-value | 4.20E-11 |
| Motif start | 45 |
| Motif end | 102 |
| Protein seq | >Potri.006G179900.2.v4.1 MAKLSQQNTKNTAINRNNTTNGVTKVKRTRRSVPRDSPPQRSSIYRGVTRHRWTGRYEAHLWDKNCWNESQNKKGRQVYL GAYDDEEVAAHAYDLAALKYWGPETILNFPLSTYQNQLKEMEGRSREEYIGSLRRKSSRGVPKYRGVSRHHHNGGWEARI GRVFGNKYLYPGTYATQEEAAAAYGIEHRGLNADLSRYIKWLKPNQNNSNGSNDLNLPNPMIIGTDNSTHRNPNQELGPP FLHNEQTYQPSETTLIPLRPAAANPTSALGLLLQSSKFKEMMEMTAVTDCPPTSSSDLELTPCSFPEDVQTYFECQYSSS YGDQGDDMIFGDYNSFMPPMFHSDF* |
| CDS seq | >Potri.006G179900.2.v4.1 ATGGCGAAATTATCACAGCAGAACACAAAAAACACAGCAATTAACAGAAATAATACGACTAATGGTGTTACCAAGGTGAA ACGAACAAGGAGAAGTGTGCCAAGAGACTCTCCTCCTCAACGTAGCTCCATTTATCGTGGTGTTACTAGGCATCGATGGA CCGGCCGATATGAAGCTCATTTGTGGGATAAGAATTGCTGGAATGAATCACAAAACAAGAAAGGACGACAAGTCTACCTT GGTGCCTATGATGACGAAGAAGTTGCAGCACATGCCTATGACTTAGCGGCATTGAAATACTGGGGTCCTGAGACAATCCT TAATTTTCCGTTATCGACATACCAAAACCAGCTGAAAGAAATGGAGGGTAGGTCTAGAGAAGAGTACATCGGATCATTGA GAAGGAAAAGCAGTCGTGGGGTTCCAAAATATCGAGGAGTTTCTAGGCATCATCACAATGGAGGTTGGGAAGCTCGGATT GGCAGAGTGTTTGGCAACAAGTACTTGTATCCTGGGACATATGCTACTCAAGAAGAAGCTGCGGCCGCATATGGTATAGA GCACCGGGGCCTGAACGCTGATCTTAGCCGGTACATCAAGTGGCTGAAACCCAATCAAAATAACAGTAACGGCAGCAATG ATCTGAATCTTCCTAACCCTATGATCATAGGCACTGATAACTCAACTCATCGTAACCCTAATCAAGAACTCGGACCACCA TTCCTTCACAACGAACAAACCTACCAACCTAGTGAAACTACATTAATTCCACTAAGGCCAGCTGCTGCGAATCCCACATC AGCCCTAGGGCTCTTACTTCAATCATCCAAGTTCAAGGAAATGATGGAAATGACAGCAGTGACAGACTGCCCACCAACCT CATCGTCAGACTTAGAACTGACACCGTGTAGCTTCCCTGAAGACGTACAAACATATTTTGAGTGCCAATATTCAAGTAGC TATGGAGATCAAGGAGATGATATGATTTTCGGTGACTACAACTCGTTTATGCCACCCATGTTTCACTCCGATTTCTAA |
Pt_6:18653314-18653322:- does not have available information here.