| Microexon ID | Pt_6:16754115-16754123:+ |
| Species | Populus Trichocarpa | Coordinates | 6:16754115..16754123 |
| Microexon Cluster ID | MEP21 |
| Size | 9 |
| Phase | 1 |
| Pfam Domain Motif | AP2 |
| Structure of Microexon-tag (flanking exon, microexon, flanking exon sizes) | 49,9,50 |
| Microexon location in the Microexon-tag | 2 |
| Microexon-tag DNA Seq | TGGGAYAAYAGYWSYWGRARWGARRGYCARAVYARGAARGGAARRCAAGTTTAYYTRGGKGSWTATGAYRAKGARGARRMWGCWGCWMGRGCWTATGAYYTDGCWGCW |
| Logo of Microexon-tag DNA Seq |  |
| Alignment of exons |  |
| Microexon DNA seq | TTTATTTGG |
| Microexon Amino Acid seq | VYLG |
| Microexon-tag DNA Seq | TGGGATAATAGTTGCAGAAGGGAAGGGCAGAGTAGAAAAGGAAGACAAGTTTATTTGGGTGGCTATGACAAGGAGGAGAAAGCAGCCAGAGCTTATGATCTTGCAGCT |
| Microexon-tag Amino Acid Seq | WDNSCRREGQSRKGRQVYLGGYDKEEKAARAYDLAA |
| Microexon-tag spanning region | 16753717-16754483 |
| Microexon-tag prediction score | 0.982 |
| Overlapped with the annotated transcript (%) | 100 |
| New Transcript ID | Potri.006G167700.1.v4.1x |
| Reference Transcript ID | Potri.006G167700.1.v4.1 |
| Gene ID | Potri.006G167700.v4.1 |
| Gene Name | NA |
| Transcript ID | Potri.006G167700.1.v4.1 |
| Protein ID | |
| Gene ID | Potri.006G167700.v4.1 |
| Gene Name | |
| Pfam domain motif | AP2 |
| Motif E-value | 1.60E-11 |
| Motif start | 174 |
| Motif end | 231 |
| Protein seq | >Potri.006G167700.1.v4.1 MDSSSHQNWLGFSLSNHHHMNNTINIPTSSDSSHLCLFEAFNTTTTSAQEVNAVVAAGRATDISLFTASGPKLEDFLGGC TSTSPSQTPQQQPLCGQFSTETPVTTTATALSDSTSSEIYDSELKTIAASFLRGFASTDHQKIDSTQKHQQLLVQAEHAP KKTVETFGQRTSIYRGVTRHRWTGRYEAHLWDNSCRREGQSRKGRQVYLGGYDKEEKAARAYDLAALKYWGPTTTTNFPV SNYEKEIEGMKHMTRQEFVASLRRKSSGFSRGASIYRGVTRHHQHGRWQARIGRVAGNKDLYLGTFSTQEEAAEAYDIAA IKFRGLNAVTNFDMSRYDVKNIANSNLPIGGISGKSKNSSESASDSKSIDGSRSDDRDLSSASSVTFASQPATSTLSFAI PIKQDPSDYWTNILGYQNTTTMNNAKNSSSSIVDPSTLLQSSTSGPAFQSPTVFKMDFNANSSVNESNNNGLLFNGGYTQ QQISGIGTSSPSSNIPFATPIAFHSNGNSYEGNPSYSSWIAQPLHSFQSAKPKLSVYQTPIFGIE* |
| CDS seq | >Potri.006G167700.1.v4.1 ATGGATTCTAGTTCTCATCAGAACTGGCTAGGTTTCTCTCTTTCCAACCATCATCACATGAATAATACCATCAACATCCC TACCTCTTCTGATTCCTCTCACCTCTGTCTCTTCGAAGCCTTTAACACCACCACTACCTCAGCACAAGAAGTAAACGCAG TAGTAGCTGCTGGTAGAGCTACAGACATCTCTTTATTTACAGCTTCTGGACCAAAACTTGAGGACTTTCTTGGTGGTTGC ACCTCTACATCACCATCACAAACACCACAACAGCAGCCACTGTGTGGTCAGTTCTCTACTGAGACACCCGTGACTACCAC CGCTACTGCTTTATCTGACAGTACTAGTTCTGAGATATATGACTCCGAGCTCAAAACTATAGCTGCTAGCTTCCTTCGTG GTTTTGCCTCCACTGATCATCAAAAAATCGATAGTACCCAAAAACATCAACAACTTCTTGTTCAGGCCGAACATGCACCA AAGAAAACAGTTGAAACTTTTGGCCAACGTACTTCAATCTATCGAGGAGTCACCAGGCATAGATGGACTGGCAGATATGA AGCCCATTTGTGGGATAATAGTTGCAGAAGGGAAGGGCAGAGTAGAAAAGGAAGACAAGTTTATTTGGGTGGCTATGACA AGGAGGAGAAAGCAGCCAGAGCTTATGATCTTGCAGCTCTCAAGTACTGGGGTCCGACCACCACAACAAACTTTCCGGTT TCTAACTATGAGAAGGAAATAGAAGGGATGAAGCACATGACAAGGCAAGAGTTTGTTGCGTCACTTCGAAGAAAAAGTAG TGGTTTCTCTAGAGGAGCATCGATTTACAGAGGAGTGACGAGGCACCATCAACACGGTCGGTGGCAAGCAAGGATCGGAA GAGTTGCTGGCAACAAAGATCTCTATCTTGGCACCTTTAGCACGCAGGAGGAAGCTGCCGAAGCTTATGACATTGCAGCG ATCAAATTTAGAGGCCTAAATGCTGTAACCAACTTTGACATGAGTCGCTATGACGTAAAAAACATAGCTAATAGCAATCT TCCCATTGGAGGAATATCCGGCAAGTCAAAAAATTCCTCAGAATCCGCTTCTGATAGCAAAAGCATTGATGGAAGCCGAT CGGACGATCGAGATCTCTCCTCAGCATCCTCGGTAACCTTTGCTTCTCAGCCTGCAACTTCTACTCTTAGCTTTGCCATA CCCATCAAACAAGACCCGTCAGATTATTGGACCAATATCCTTGGATACCAAAACACCACTACTATGAACAATGCCAAGAA CAGTAGCAGCAGCATTGTTGATCCAAGCACTTTACTTCAATCTTCCACAAGCGGTCCTGCTTTTCAAAGCCCAACAGTTT TCAAAATGGACTTCAATGCAAATTCATCTGTCAATGAAAGCAATAACAATGGGCTATTATTCAATGGTGGTTATACACAG CAGCAGATAAGTGGTATTGGTACATCATCACCAAGTTCAAATATCCCATTTGCTACACCCATCGCCTTCCATAGTAATGG TAATAGTTACGAGGGCAACCCAAGTTATAGTAGCTGGATTGCTCAACCTTTGCATTCTTTCCAATCTGCAAAGCCCAAAC TCTCAGTGTATCAGACTCCCATTTTTGGAATTGAATGA |
Pt_6:16754115-16754123:+ does not have available information here.