| Microexon ID | Pt_5:12484500-12484508:- |
| Species | Populus Trichocarpa | Coordinates | 5:12484500..12484508 |
| Microexon Cluster ID | MEP21 |
| Size | 9 |
| Phase | 1 |
| Pfam Domain Motif | AP2 |
| Structure of Microexon-tag (flanking exon, microexon, flanking exon sizes) | 49,9,50 |
| Microexon location in the Microexon-tag | 2 |
| Microexon-tag DNA Seq | TGGGAYAAYAGYWSYWGRARWGARRGYCARAVYARGAARGGAARRCAAGTTTAYYTRGGKGSWTATGAYRAKGARGARRMWGCWGCWMGRGCWTATGAYYTDGCWGCW |
| Logo of Microexon-tag DNA Seq |  |
| Alignment of exons |  |
| Microexon DNA seq | TTTATCTGG |
| Microexon Amino Acid seq | VYLG |
| Microexon-tag DNA Seq | TGGGACAATAGTTGTAAGAAGGAAGGCCAGACCAGGAAAGGAAGGCAAGTTTATCTGGGGGGTTATGATATGGAAGAGAAAGCTGCAAGGTCTTATGATCTTGCTGCC |
| Microexon-tag Amino Acid Seq | WDNSCKKEGQTRKGRQVYLGGYDMEEKAARSYDLAA |
| Microexon-tag spanning region | 12484359-12484711 |
| Microexon-tag prediction score | 0.9793 |
| Overlapped with the annotated transcript (%) | 100 |
| New Transcript ID | Potri.005G148400.1.v4.1x |
| Reference Transcript ID | Potri.005G148400.1.v4.1 |
| Gene ID | Potri.005G148400.v4.1 |
| Gene Name | NA |
| Transcript ID | Potri.005G148400.1.v4.1 |
| Protein ID | |
| Gene ID | Potri.005G148400.v4.1 |
| Gene Name | |
| Pfam domain motif | AP2 |
| Motif E-value | 2.40E-11 |
| Motif start | 327 |
| Motif end | 385 |
| Protein seq | >Potri.005G148400.1.v4.1 MKSMSNNNNGSNNNWLGFSLSPHMKMEAASDPQHHHQYHHQTQTHAPTADSVSAAVPTSFYLSTSLFNSSGICYGVGENG GFHSPLSVMPLKSDGSLCIMEALTRSQPEGMVSSPSPKLEDFLGGATMESHQYSSHEREAMALSLDSIYYQQSSEPETNR QHSLNLYEPYRQQDQQFSVQTHPYYSGIACQGLYQAPLEGETKGTQLADCNSPIPLMGDDELPCLKNWAARHYSSQNVLE QQINSGMVNDGGASCSASAVGCGDLQSLSLSMSPGSQSSCITAPRQISPAGTECVAIETKKRGPVKVGQKQPVHRKSIDT FGQRTSQYRGVTRHRWTGRYEAHLWDNSCKKEGQTRKGRQVYLGGYDMEEKAARSYDLAALKYWGPSTHINFPLENYQEE LEEMKNMGRQEYVAHLRRKSSGFSRGASIYRGVTRHHQHGRWQARIGRVAGNKDLYLGTFSTQEEAAEAYDIAAIKFRGV NAVTNFNITRYDVDRIMASNTLLAGELARRNRDKESSIEAIDYNTSTQNNCVLYQSPQEQPNASGESLNQKSMSAGNYRS TSFSVAVQDLMGIDHSVNSSQPVVDESAKLGGTHLSNPSSLVTSLSSSREASPDKTGTPVLFAKPPRASKFIGPTTSVTP WIQAAAQLRPAGISMAHLPVFAAWNDT* |
| CDS seq | >Potri.005G148400.1.v4.1 ATGAAATCTATGAGTAATAATAACAATGGAAGTAATAATAACTGGTTAGGCTTCTCTCTCTCGCCCCATATGAAAATGGA GGCTGCTTCTGACCCCCAACATCATCATCAGTACCATCATCAAACCCAAACTCATGCTCCTACTGCTGATTCTGTTTCTG CTGCCGTTCCAACAAGTTTCTATCTTTCTACTTCTCTCTTCAACAGTTCTGGAATCTGTTATGGAGTTGGAGAAAATGGT GGCTTTCACTCTCCTTTGTCTGTTATGCCCCTCAAGTCTGACGGCTCTCTTTGTATCATGGAAGCTCTCACTAGATCACA GCCTGAAGGAATGGTGTCGAGTCCATCACCAAAACTGGAGGACTTCCTAGGTGGTGCAACCATGGAAAGTCATCAGTACA GTAGCCATGAAAGGGAAGCCATGGCCTTAAGTCTAGACAGCATATATTACCAGCAAAGCTCAGAGCCAGAAACTAATAGA CAACATTCTCTCAACCTTTATGAACCATATAGGCAGCAAGACCAACAGTTTTCAGTTCAAACCCACCCATATTATTCTGG AATAGCATGCCAAGGATTGTATCAGGCTCCACTGGAGGGAGAAACCAAGGGTACTCAGCTTGCAGATTGTAATTCACCTA TTCCTCTAATGGGAGACGATGAGCTGCCTTGCTTGAAAAACTGGGCTGCTAGACACTATTCCTCGCAAAATGTACTGGAG CAGCAGATTAATAGTGGCATGGTTAATGATGGTGGGGCTTCTTGTTCTGCTAGTGCTGTAGGTTGTGGGGATTTACAGTC TCTCAGCTTGTCTATGAGCCCTGGTTCGCAGTCAAGCTGCATTACAGCTCCAAGGCAGATCTCACCTGCTGGCACTGAAT GTGTGGCCATAGAAACAAAGAAGAGAGGCCCTGTAAAAGTGGGTCAAAAACAGCCTGTTCATAGGAAGTCTATTGACACA TTTGGCCAAAGAACATCACAGTATAGAGGTGTTACAAGACACAGATGGACTGGTAGATATGAAGCCCATCTCTGGGACAA TAGTTGTAAGAAGGAAGGCCAGACCAGGAAAGGAAGGCAAGTTTATCTGGGGGGTTATGATATGGAAGAGAAAGCTGCAA GGTCTTATGATCTTGCTGCCCTTAAGTACTGGGGACCTTCAACTCATATAAATTTTCCGTTAGAAAATTACCAGGAAGAA CTTGAAGAAATGAAAAACATGGGCCGCCAGGAATATGTTGCACATTTACGGAGAAAAAGTAGTGGGTTTTCTAGGGGGGC CTCAATCTACAGAGGAGTAACAAGGCATCACCAGCATGGAAGATGGCAAGCAAGGATAGGCCGGGTTGCAGGGAACAAGG ACCTTTATCTCGGGACGTTCAGCACCCAAGAGGAAGCTGCTGAAGCTTATGATATTGCTGCGATCAAATTTCGGGGGGTT AATGCTGTGACAAACTTTAACATAACAAGATATGATGTTGATAGGATCATGGCCAGCAACACGCTTCTAGCTGGAGAACT AGCCAGGCGAAACCGAGACAAAGAATCTAGCATTGAGGCCATTGACTATAACACATCAACACAGAACAATTGTGTTTTAT ACCAGTCTCCGCAGGAACAGCCAAATGCCAGTGGAGAATCTCTTAATCAGAAGTCAATGAGTGCTGGGAATTATCGAAGC ACCTCTTTCTCAGTGGCAGTGCAAGATCTTATGGGTATAGATCATTCAGTGAACTCTAGCCAGCCAGTGGTAGATGAATC AGCCAAGCTAGGAGGAACTCATCTCTCGAACCCCTCATCTTTGGTGACCAGTTTGAGCAGCTCTAGAGAAGCTAGCCCTG ACAAGACCGGAACCCCTGTGCTCTTTGCTAAACCTCCACGGGCATCAAAGTTCATAGGCCCTACAACCAGCGTTACTCCT TGGATCCAAGCAGCAGCCCAATTGAGGCCAGCAGGAATCTCCATGGCTCACTTGCCAGTTTTTGCTGCATGGAATGATAC CTAA |
Pt_5:12484500-12484508:- does not have available information here.