| Microexon ID | Pt_3:20461187-20461195:- |
| Species | Populus Trichocarpa | Coordinates | 3:20461187..20461195 |
| Microexon Cluster ID | MEP21 |
| Size | 9 |
| Phase | 1 |
| Pfam Domain Motif | AP2 |
| Structure of Microexon-tag (flanking exon, microexon, flanking exon sizes) | 49,9,50 |
| Microexon location in the Microexon-tag | 2 |
| Microexon-tag DNA Seq | TGGGAYAAYAGYWSYWGRARWGARRGYCARAVYARGAARGGAARRCAAGTTTAYYTRGGKGSWTATGAYRAKGARGARRMWGCWGCWMGRGCWTATGAYYTDGCWGCW |
| Logo of Microexon-tag DNA Seq |  |
| Alignment of exons |  |
| Microexon DNA seq | TCTATTTAG |
| Microexon Amino Acid seq | VYLG |
| Microexon-tag DNA Seq | TGGGATAATAGTTGCAGAAGAGAAGGTCAATCTAGGAAAGGAAGACAGGTCTATTTAGGTGGCTATGACAAAGAAGAAAAGGCAGCTAGGGCTTATGATCTTGCTGCA |
| Microexon-tag Amino Acid Seq | WDNSCRREGQSRKGRQVYLGGYDKEEKAARAYDLAA |
| Microexon-tag spanning region | 20461043-20461372 |
| Microexon-tag prediction score | 0.9644 |
| Overlapped with the annotated transcript (%) | 100 |
| New Transcript ID | Potri.003G205700.1.v4.1x |
| Reference Transcript ID | Potri.003G205700.1.v4.1 |
| Gene ID | Potri.003G205700.v4.1 |
| Gene Name | NA |
| Transcript ID | Potri.003G205700.1.v4.1 |
| Protein ID | |
| Gene ID | Potri.003G205700.v4.1 |
| Gene Name | |
| Pfam domain motif | AP2 |
| Motif E-value | 4.10E-11 |
| Motif start | 168 |
| Motif end | 225 |
| Protein seq | >Potri.003G205700.1.v4.1 MNSNNWLSFPLSPTHPSLPAHLHASHPHQFSLGLVNDNMENPFQTQEWSLLNTHQGNNEVPKVADFLGVSKSENQSDLVA FNEIQANESDYLFSNNSLVPVQNAVVGATNTFEFQENASNLQSLTLSMGSASGKGSTCEPSGDNSTNTVEAAAPRRTLDT FGQRTSIYRGVTRHRWTGRYEAHLWDNSCRREGQSRKGRQVYLGGYDKEEKAARAYDLAALKYWGTSTTTNFPISNYEKE IEEMKHMTRQEFVASIRRKSSGFSRGASMYRGVTRHHQHGRWQARIGRVAGNKDLYLGTFSTEEEAAEAYDIAAIKFRGL NAVTNFDMNRYDVKSILESNTLPIGGGAAKRLKEAQAIESSRKREEMIALGSSFPYGSTSSSSRLQAYPLMQTPFEQPQP LLTLQNQDISQYTQDSSSFHQNFLQTQLHLHQQSTGSNFLHNQSNQNPQYYNSYIQNNPALLHGLWNMGSSSSVMENNGS SSGSYSTGGYLGNGLGMASNSTGSNAVGSAEELALVKVDYDMPSSGYGSWSGDSVQGSNPGVFTMWNE* |
| CDS seq | >Potri.003G205700.1.v4.1 ATGAATTCTAACAACTGGCTTTCATTTCCTCTTTCTCCTACTCATCCTTCCTTGCCTGCTCATCTACATGCATCCCACCC TCATCAATTCTCTCTAGGGTTAGTCAATGATAATATGGAAAACCCATTTCAAACTCAAGAGTGGAGTCTTCTTAACACTC ATCAAGGCAACAATGAAGTGCCAAAGGTTGCAGACTTTCTTGGTGTGAGCAAATCTGAGAATCAATCAGATCTTGTAGCC TTCAATGAAATTCAAGCTAATGAATCTGACTATCTCTTTTCAAACAATAGTCTAGTACCAGTCCAAAATGCTGTTGTAGG CGCCACTAATACCTTTGAGTTTCAAGAAAATGCTAGCAATTTGCAGTCATTAACATTGTCTATGGGCAGTGCTAGTGGTA AAGGTTCTACATGTGAACCCAGTGGGGATAATAGCACTAATACTGTTGAAGCTGCTGCACCAAGAAGAACTTTGGATACA TTTGGGCAAAGAACATCCATATATCGTGGTGTAACAAGGCATCGATGGACAGGAAGGTATGAAGCTCATTTATGGGATAA TAGTTGCAGAAGAGAAGGTCAATCTAGGAAAGGAAGACAGGTCTATTTAGGTGGCTATGACAAAGAAGAAAAGGCAGCTA GGGCTTATGATCTTGCTGCACTTAAGTACTGGGGAACATCCACCACTACCAATTTTCCAATCAGCAACTACGAGAAAGAA ATAGAGGAAATGAAGCACATGACCAGGCAAGAATTTGTGGCCTCCATTAGAAGGAAGAGTAGTGGCTTCTCTAGGGGTGC ATCCATGTATCGTGGAGTTACAAGGCATCACCAGCATGGTAGATGGCAAGCAAGGATAGGCAGAGTTGCAGGAAACAAAG ATCTCTACTTGGGAACTTTTAGCACTGAGGAGGAGGCTGCAGAAGCTTATGACATAGCAGCAATAAAGTTTAGAGGGCTT AATGCAGTGACTAACTTTGACATGAATCGATATGATGTGAAGAGCATTCTTGAAAGCAATACTTTGCCAATTGGAGGAGG GGCAGCCAAACGGCTAAAGGAGGCTCAAGCAATTGAATCATCACGAAAAAGAGAAGAAATGATTGCTCTTGGCTCAAGTT TTCCATATGGATCAACTTCAAGCTCTAGCAGGCTACAAGCTTACCCTCTAATGCAGACACCATTTGAGCAACCTCAACCT TTACTTACTCTACAAAATCAAGACATTTCTCAGTACACTCAGGATTCCTCATCATTCCACCAAAATTTCCTTCAAACACA GCTTCATTTGCACCAGCAATCTACAGGGTCTAATTTCCTGCATAACCAATCAAACCAAAACCCTCAATATTACAATAGTT ATATCCAAAACAATCCAGCTTTACTTCATGGATTGTGGAACATGGGTTCTTCATCATCTGTAATGGAGAATAATGGAAGT TCTAGTGGGAGCTATAGTACTGGAGGTTATCTGGGAAATGGGCTGGGAATGGCTTCCAATTCAACAGGGTCTAATGCAGT AGGATCAGCCGAGGAACTTGCACTTGTCAAAGTTGATTATGATATGCCTTCTAGTGGCTATGGAAGCTGGTCTGGGGACT CAGTCCAGGGATCCAATCCAGGTGTTTTCACTATGTGGAATGAGTGA |
Pt_3:20461187-20461195:- does not have available information here.