| Microexon ID | Pt_3:18959380-18959388:+ |
| Species | Populus Trichocarpa | Coordinates | 3:18959380..18959388 |
| Microexon Cluster ID | MEP21 |
| Size | 9 |
| Phase | 1 |
| Pfam Domain Motif | AP2 |
| Structure of Microexon-tag (flanking exon, microexon, flanking exon sizes) | 49,9,50 |
| Microexon location in the Microexon-tag | 2 |
| Microexon-tag DNA Seq | TGGGAYAAYAGYWSYWGRARWGARRGYCARAVYARGAARGGAARRCAAGTTTAYYTRGGKGSWTATGAYRAKGARGARRMWGCWGCWMGRGCWTATGAYYTDGCWGCW |
| Logo of Microexon-tag DNA Seq |  |
| Alignment of exons |  |
| Microexon DNA seq | TGTATTTAG |
| Microexon Amino Acid seq | VYLG |
| Microexon-tag DNA Seq | TGGGATAAGAACTGCTGGAATGAGTCACAGAACAAGAAAGGAAGACAAGTGTATTTAGGGGCCTACGATGACGAAGAAGCGGCTGGGCATGCCTATGACTTGGCAGCA |
| Microexon-tag Amino Acid Seq | WDKNCWNESQNKKGRQVYLGAYDDEEAAGHAYDLAA |
| Microexon-tag spanning region | 18959155-18959662 |
| Microexon-tag prediction score | 0.9563 |
| Overlapped with the annotated transcript (%) | 100 |
| New Transcript ID | Potri.003G185300.1.v4.1x |
| Reference Transcript ID | Potri.003G185300.1.v4.1 |
| Gene ID | Potri.003G185300.v4.1 |
| Gene Name | NA |
| Transcript ID | Potri.003G185300.1.v4.1 |
| Protein ID | |
| Gene ID | Potri.003G185300.v4.1 |
| Gene Name | |
| Pfam domain motif | AP2 |
| Motif E-value | 2.30E-10 |
| Motif start | 42 |
| Motif end | 99 |
| Protein seq | >Potri.003G185300.1.v4.1 MGKTSKQSLKNSANTSINPATKVKRTRKSVPRDSPPQRSSIYRGVTRHRWTGRYEAHLWDKNCWNESQNKKGRQVYLGAY DDEEAAGHAYDLAALKYWGQDTILNFPLSTYEEEFKEMEGHSKEEYIGSLRRKSSGFSRGVSKYRGVARHHHNGRWEARI GRVFGNKYLYLGTYATQEEAATAYDMAAIEYRGLNAVTNFDLSRYVKWLRPNNQNNINNPQQNPNGDANIPIQNLDQKLE LDFISHQQSSKVNDTEVAPTRPCGAGGSASSALGLLLQSSKFKEMLERTSASDCPLTPPESDRDPPRRSFPDDIQTYFDC QDSSSYTDGDDIIFGDLHSFASPIFHCELDG* |
| CDS seq | >Potri.003G185300.1.v4.1 ATGGGAAAAACATCAAAGCAAAGCCTAAAGAACTCTGCAAACACTAGCATTAATCCCGCAACCAAGGTGAAGCGGACTAG AAAGAGTGTTCCTCGAGACTCTCCTCCTCAACGCAGCTCCATCTATAGAGGCGTTACAAGGCATCGATGGACCGGACGTT ATGAGGCTCATTTGTGGGATAAGAACTGCTGGAATGAGTCACAGAACAAGAAAGGAAGACAAGTGTATTTAGGGGCCTAC GATGACGAAGAAGCGGCTGGGCATGCCTATGACTTGGCAGCATTAAAGTACTGGGGACAGGATACTATCCTCAATTTTCC TCTGTCAACTTACGAAGAAGAATTCAAAGAGATGGAGGGTCATTCGAAAGAAGAATATATTGGATCACTGAGGAGAAAAA GTAGTGGGTTTTCACGCGGTGTGTCCAAATATAGAGGTGTAGCCAGACACCATCATAATGGAAGATGGGAAGCTCGAATT GGCAGAGTTTTCGGCAACAAGTACCTCTACCTTGGAACATATGCCACTCAAGAAGAAGCAGCAACAGCATATGACATGGC AGCTATAGAGTACCGTGGACTTAATGCTGTGACAAACTTTGACCTAAGCCGCTACGTCAAATGGCTACGTCCCAATAACC AAAATAATATTAATAATCCTCAACAAAACCCTAATGGTGATGCTAATATTCCTATACAAAACCTTGATCAAAAGCTTGAA TTGGATTTCATATCACATCAACAAAGTTCGAAAGTTAATGACACAGAAGTGGCTCCAACACGGCCTTGTGGTGCTGGTGG CTCGGCGTCATCTGCATTAGGGCTTCTGTTGCAGTCCTCAAAGTTCAAGGAAATGTTGGAGAGAACATCAGCTTCTGATT GCCCTTTGACACCACCCGAATCCGACCGCGATCCGCCTCGTAGGAGCTTCCCAGATGACATCCAAACTTACTTCGATTGC CAAGACTCCAGTAGCTACACTGATGGTGATGACATTATTTTTGGAGACCTACATTCATTTGCTTCACCGATTTTTCATTG CGAATTGGATGGGTAG |
Pt_3:18959380-18959388:+ does not have available information here.