| Microexon ID | Pt_18:12198504-12198512:- |
| Species | Populus Trichocarpa | Coordinates | 18:12198504..12198512 |
| Microexon Cluster ID | MEP21 |
| Size | 9 |
| Phase | 1 |
| Pfam Domain Motif | AP2 |
| Structure of Microexon-tag (flanking exon, microexon, flanking exon sizes) | 49,9,50 |
| Microexon location in the Microexon-tag | 2 |
| Microexon-tag DNA Seq | TGGGAYAAYAGYWSYWGRARWGARRGYCARAVYARGAARGGAARRCAAGTTTAYYTRGGKGSWTATGAYRAKGARGARRMWGCWGCWMGRGCWTATGAYYTDGCWGCW |
| Logo of Microexon-tag DNA Seq |  |
| Alignment of exons |  |
| Microexon DNA seq | TTTACCTTG |
| Microexon Amino Acid seq | VYLG |
| Microexon-tag DNA Seq | TGGGATAAGAATTGCTGGAATGAATCACAGAACAAGAAAGGACGACAAGTTTACCTTGGTGCCTATGATGATGAAGAAGCGGCAGCGCATGCTTATGACTTAGCAGCA |
| Microexon-tag Amino Acid Seq | WDKNCWNESQNKKGRQVYLGAYDDEEAAAHAYDLAA |
| Microexon-tag spanning region | 12198320-12198710 |
| Microexon-tag prediction score | 0.9663 |
| Overlapped with the annotated transcript (%) | 100 |
| New Transcript ID | Potri.018G102200.1.v4.1x |
| Reference Transcript ID | Potri.018G102200.1.v4.1 |
| Gene ID | Potri.018G102200.v4.1 |
| Gene Name | NA |
| Transcript ID | Potri.018G102200.1.v4.1 |
| Protein ID | |
| Gene ID | Potri.018G102200.v4.1 |
| Gene Name | |
| Pfam domain motif | AP2 |
| Motif E-value | 1.00E-11 |
| Motif start | 45 |
| Motif end | 102 |
| Protein seq | >Potri.018G102200.1.v4.1 MAKLSQKNTKNTASNNNNTTNGVTKVKRTRRSVPRDSPPQRSSIYRGVTRHRWTGRYEAHLWDKNCWNESQNKKGRQVYL GAYDDEEAAAHAYDLAALKYWGPETILNFPLSTYQNELKEMEGQSREECIGSLRRKSSGFSRGVSKYRGVARHHHNGRWE ARIGRVFGNKYLYLGTYATQEEAATAYDMAAIEYRGLNAVTNFDLSRYIKWLKPNQNNTDNNNGLDLPNPIIGTDNSTHP NPNQELGTTFLQINQQTYQPSETTLTQPRPATNPSSALGLLLQSSKFKEMMEMTAVTDCPPTPPSGLDPTPCSFLEDVQT YFDCLDSSNYGDQGDDMIFGDLNSFVPPMFQCDFET* |
| CDS seq | >Potri.018G102200.1.v4.1 ATGGCGAAATTATCACAGAAGAACACAAAAAACACAGCAAGTAACAATAATAACACGACTAATGGCGTGACCAAGGTGAA ACGAACAAGGAGAAGTGTTCCAAGAGACTCTCCTCCTCAACGCAGCTCCATTTATCGTGGCGTTACTAGGCACCGGTGGA CCGGCCGATATGAAGCTCATTTGTGGGATAAGAATTGCTGGAATGAATCACAGAACAAGAAAGGACGACAAGTTTACCTT GGTGCCTATGATGATGAAGAAGCGGCAGCGCATGCTTATGACTTAGCAGCACTGAAGTACTGGGGTCCTGAGACAATTCT TAATTTTCCGTTGTCGACATACCAAAATGAACTGAAAGAAATGGAGGGTCAGTCGAGAGAAGAGTGCATTGGATCATTGA GAAGGAAAAGCAGTGGCTTTTCTCGTGGAGTTTCAAAATACCGAGGAGTTGCTAGGCATCATCACAACGGGAGGTGGGAA GCTCGGATTGGTAGAGTATTCGGCAACAAATACCTATATCTCGGGACATATGCTACTCAAGAAGAAGCTGCCACCGCTTA CGATATGGCGGCTATAGAGTACCGTGGCCTGAATGCTGTTACCAACTTCGATCTTAGCCGGTACATCAAATGGCTAAAAC CCAATCAAAATAACACTGATAACAATAATGGTCTGGATCTCCCTAACCCTATCATAGGCACTGATAATTCAACTCATCCT AACCCTAACCAAGAGCTTGGAACAACCTTCCTTCAAATTAACCAGCAAACCTACCAACCTAGTGAAACTACATTAACTCA ACCACGGCCAGCAACGAATCCTTCATCTGCCCTAGGGCTCTTACTTCAATCATCGAAGTTCAAGGAGATGATGGAAATGA CAGCAGTGACAGATTGCCCACCAACCCCACCGTCGGGCTTAGACCCGACACCATGTAGCTTCCTTGAAGACGTGCAGACA TATTTTGACTGTCTCGATTCAAGTAACTACGGGGATCAAGGTGACGACATGATTTTTGGCGACCTCAACTCGTTTGTGCC ACCCATGTTCCAGTGCGATTTCGAGACATAA |
Pt_18:12198504-12198512:- does not have available information here.