| Microexon ID | Pt_18:11222414-11222422:- |
| Species | Populus Trichocarpa | Coordinates | 18:11222414..11222422 |
| Microexon Cluster ID | MEP21 |
| Size | 9 |
| Phase | 1 |
| Pfam Domain Motif | AP2 |
| Structure of Microexon-tag (flanking exon, microexon, flanking exon sizes) | 49,9,50 |
| Microexon location in the Microexon-tag | 2 |
| Microexon-tag DNA Seq | TGGGAYAAYAGYWSYWGRARWGARRGYCARAVYARGAARGGAARRCAAGTTTAYYTRGGKGSWTATGAYRAKGARGARRMWGCWGCWMGRGCWTATGAYYTDGCWGCW |
| Logo of Microexon-tag DNA Seq |  |
| Alignment of exons |  |
| Microexon DNA seq | TTTATTTGG |
| Microexon Amino Acid seq | VYLG |
| Microexon-tag DNA Seq | TGGGATAATAGTTGCAGAAGGGAAGGCCAAAGTAGAAAAGGAAGGCAAGTTTATTTGGGTGGCTATGACAAGGAGGAGAAAGCAGCTAGAGCTTATGATCTTGCAGCT |
| Microexon-tag Amino Acid Seq | WDNSCRREGQSRKGRQVYLGGYDKEEKAARAYDLAA |
| Microexon-tag spanning region | 11222067-11222872 |
| Microexon-tag prediction score | 0.982 |
| Overlapped with the annotated transcript (%) | 100 |
| New Transcript ID | Potri.018G091600.1.v4.1x |
| Reference Transcript ID | Potri.018G091600.1.v4.1 |
| Gene ID | Potri.018G091600.v4.1 |
| Gene Name | NA |
| Transcript ID | Potri.018G091600.1.v4.1 |
| Protein ID | |
| Gene ID | Potri.018G091600.v4.1 |
| Gene Name | |
| Pfam domain motif | AP2 |
| Motif E-value | 1.60E-11 |
| Motif start | 170 |
| Motif end | 227 |
| Protein seq | >Potri.018G091600.1.v4.1 MDSTSHQNWLGFSLSNHHHMNNINIPSSSDSSNLCLFEAFNTTPTTTTSAQEDNAVAACRPTDISLFTTSGPKLEDFLGC CTTTPPSQQPLGGQFSAETPGTTATTVSDNSSSEIYDSELKTIAASFLRGYSSNDHQQTGSSQKHQQLLVQSEHAPKKTV DTFGQRTSIYRGVTRHRWTGRYEAHLWDNSCRREGQSRKGRQVYLGGYDKEEKAARAYDLAALKYWGPTTTTNFPVSNYE KELEGMKHMTRQEFVASLRRKSSGFSRGASIYRGVTRHHQHGRWQARIGRVAGNKDLYLGTFSTQEEAAEAYDIAAIKFR GLNAVTNFDMSRYDVKSIANSNLPIGGISGKSKNSSESVSDSKSIDVSRSDDRDLSSASSVTFASQPTTSTLSFAMPIKQ DPSDYWTNILGYQNSTTTMNNTKNSSSIVAPSTLLQSSTSFHAFQGPTAFSMDFNTNSSVNESNNSGLLFNGGYIQQQSG GDGISTSSSSSSIPFATPIALHGNGSSYEGNSSYGSWISQSLHSFQSAKPNLSVYQTPIFGME* |
| CDS seq | >Potri.018G091600.1.v4.1 ATGGATTCTACTTCTCATCAGAACTGGCTCGGTTTCTCTCTTTCCAACCATCATCACATGAATAATATTAACATCCCTTC CTCTTCTGATTCCTCTAACCTCTGTCTCTTTGAAGCCTTTAACACTACACCCACCACCACTACCTCAGCACAAGAAGATA ATGCAGTAGCTGCCTGTAGACCAACTGACATCTCTTTATTTACCACTTCTGGACCAAAACTAGAGGACTTCCTTGGTTGT TGCACCACTACACCGCCATCACAACAGCCACTGGGTGGTCAGTTCTCGGCTGAGACACCCGGGACTACGGCTACTACTGT ATCTGACAATAGTAGTTCTGAGATATATGATTCTGAGCTCAAAACTATAGCTGCTAGCTTCCTTCGTGGTTATTCCTCTA ATGATCACCAACAAACCGGTAGTTCTCAAAAACATCAACAGCTTCTTGTGCAGTCTGAACATGCACCAAAGAAAACTGTT GATACTTTTGGCCAACGTACTTCAATTTATCGAGGAGTCACCAGGCATAGATGGACTGGTAGATATGAAGCCCATTTGTG GGATAATAGTTGCAGAAGGGAAGGCCAAAGTAGAAAAGGAAGGCAAGTTTATTTGGGTGGCTATGACAAGGAGGAGAAAG CAGCTAGAGCTTATGATCTTGCAGCTCTCAAGTACTGGGGTCCGACCACCACTACAAACTTTCCGGTTTCTAACTATGAG AAGGAACTAGAAGGGATGAAGCACATGACAAGGCAAGAGTTTGTTGCGTCACTTCGAAGAAAAAGTAGTGGTTTCTCCAG AGGAGCCTCAATTTACAGGGGAGTGACAAGGCACCATCAACACGGTCGGTGGCAAGCAAGGATAGGAAGAGTTGCCGGCA ACAAAGATCTCTATCTTGGCACCTTTAGCACCCAAGAGGAAGCTGCCGAAGCTTATGACATTGCAGCAATCAAATTTAGA GGCCTAAATGCTGTAACCAACTTTGACATGAGTCGCTATGACGTAAAAAGCATAGCTAACAGCAATCTTCCCATTGGAGG AATATCTGGCAAATCAAAGAATTCATCAGAATCAGTTTCTGATAGCAAAAGCATTGATGTAAGCCGATCGGACGATCGGG ATCTCTCCTCGGCGTCCTCGGTAACCTTTGCTTCTCAGCCTACAACCTCTACTCTTAGCTTTGCCATGCCCATCAAACAA GACCCATCAGATTATTGGACAAATATCCTTGGATACCAAAACTCCACCACCACGATGAATAATACCAAGAACAGTAGCAG CATTGTCGCACCAAGCACTTTACTTCAATCTTCCACAAGTTTTCATGCTTTTCAAGGTCCAACAGCTTTCAGTATGGACT TCAACACGAATTCTTCAGTCAATGAAAGCAACAACAGTGGGCTATTATTCAATGGTGGTTATATACAGCAACAGAGTGGT GGTGATGGTATTAGTACATCATCATCAAGTTCGAGTATTCCATTTGCTACACCCATTGCCTTGCATGGTAATGGAAGCAG TTACGAGGGTAACTCAAGTTATGGCAGCTGGATTTCTCAATCTCTGCATTCTTTCCAATCTGCAAAGCCCAACCTCTCAG TGTACCAGACACCTATTTTTGGAATGGAATGA |
Pt_18:11222414-11222422:- does not have available information here.