| Microexon ID | Pt_17:8703062-8703070:+ |
| Species | Populus Trichocarpa | Coordinates | 17:8703062..8703070 |
| Microexon Cluster ID | MEP21 |
| Size | 9 |
| Phase | 1 |
| Pfam Domain Motif | AP2 |
| Structure of Microexon-tag (flanking exon, microexon, flanking exon sizes) | 49,9,50 |
| Microexon location in the Microexon-tag | 2 |
| Microexon-tag DNA Seq | TGGGAYAAYAGYWSYWGRARWGARRGYCARAVYARGAARGGAARRCAAGTTTAYYTRGGKGSWTATGAYRAKGARGARRMWGCWGCWMGRGCWTATGAYYTDGCWGCW |
| Logo of Microexon-tag DNA Seq |  |
| Alignment of exons |  |
| Microexon DNA seq | TATACCTCG |
| Microexon Amino Acid seq | VYLG |
| Microexon-tag DNA Seq | TGGGATAAGCTCTCATGGAATGTAACACAGAAGAAGAAAGGGAAACAAGTATACCTCGGAGCTTATGATGAAGAAGAATCCGCGGCGAGAGCATATGATTTGGCTGCT |
| Microexon-tag Amino Acid Seq | WDKLSWNVTQKKKGKQVYLGAYDEEESAARAYDLAA |
| Microexon-tag spanning region | 8702858-8703216 |
| Microexon-tag prediction score | 0.9286 |
| Overlapped with the annotated transcript (%) | 100 |
| New Transcript ID | Potri.017G078600.1.v4.1x |
| Reference Transcript ID | Potri.017G078600.1.v4.1 |
| Gene ID | Potri.017G078600.v4.1 |
| Gene Name | NA |
| Transcript ID | Potri.017G078600.1.v4.1 |
| Protein ID | |
| Gene ID | Potri.017G078600.v4.1 |
| Gene Name | |
| Pfam domain motif | AP2 |
| Motif E-value | 2.30E-12 |
| Motif start | 69 |
| Motif end | 128 |
| Protein seq | >Potri.017G078600.1.v4.1 MMMIKNEENPGRRRGCIADSEAQVARCVKRRRRDPAIVALGSDDNQSQQQMPQKQTDQTSAATTVKRSSRFRGVSRHRWT GRFEAHLWDKLSWNVTQKKKGKQVYLGAYDEEESAARAYDLAALKYWGTSTFTNFPISDYEKEIEIMQTVTKEEYLASLR RKSSGFSRGVSKYRGVARHHHNGRWEARIGRVFGNKYLYLGTYSTQEEAARAYDIAAIEYRGINAVTNFDLSTYIRWIKP GVAAQAAANELQTVTDPQTAATLTDTYTPREETKPSLFLPNQFTADYLNSPPKLDAFQNNIFVDSSNKTSSPTALSLLLR SSVFRELVEKNSNVCEEETDGNEIKNQPMAGSDDEYGGIFYDGIGDIPFVYSSNKYSLGLEERELQFVL* |
| CDS seq | >Potri.017G078600.1.v4.1 ATGATGATGATAAAGAATGAAGAAAACCCAGGAAGGCGCCGCGGATGCATTGCAGACAGTGAAGCTCAGGTAGCTCGGTG TGTCAAAAGGCGGCGAAGGGATCCTGCTATAGTTGCACTCGGAAGTGACGATAATCAAAGTCAGCAGCAGATGCCCCAGA AACAAACTGATCAAACTTCTGCTGCTACCACTGTGAAGAGAAGCTCAAGATTTCGTGGCGTCAGCAGACATAGATGGACA GGTCGGTTTGAAGCCCACCTGTGGGATAAGCTCTCATGGAATGTAACACAGAAGAAGAAAGGGAAACAAGTATACCTCGG AGCTTATGATGAAGAAGAATCCGCGGCGAGAGCATATGATTTGGCTGCTTTGAAGTATTGGGGAACATCAACTTTTACCA ATTTTCCGATATCAGATTATGAGAAAGAGATTGAGATAATGCAAACTGTAACGAAAGAGGAGTATTTAGCATCTCTAAGA AGAAAGAGCAGCGGTTTTTCAAGAGGTGTATCCAAGTATAGGGGAGTTGCAAGGCACCATCACAATGGGAGATGGGAAGC GAGAATAGGGAGAGTTTTCGGAAACAAATACCTTTACCTTGGCACATACAGCACGCAAGAGGAGGCTGCACGTGCTTATG ACATTGCAGCAATTGAGTACAGAGGGATCAATGCGGTGACGAACTTTGACTTGAGCACTTATATCAGATGGATAAAGCCA GGAGTAGCTGCTCAAGCTGCTGCAAATGAACTACAGACAGTCACAGATCCTCAGACAGCAGCGACATTGACTGATACCTA CACTCCAAGAGAGGAAACCAAACCCTCACTGTTTCTACCTAATCAGTTCACTGCAGATTACCTGAACTCCCCACCAAAGC TAGACGCATTTCAGAACAATATCTTTGTAGATTCTTCCAACAAGACTTCATCGCCCACTGCCCTCAGCCTCCTCCTACGG TCTTCGGTATTTAGAGAATTGGTTGAGAAGAATTCAAATGTTTGTGAGGAGGAAACTGATGGGAATGAGATAAAGAACCA ACCAATGGCAGGTAGTGATGATGAATATGGTGGGATATTTTATGATGGAATTGGAGATATTCCATTTGTTTACTCTTCTA ACAAATACAGCCTAGGGTTGGAAGAAAGAGAACTCCAGTTCGTCTTATAA |
Pt_17:8703062-8703070:+ does not have available information here.