| Microexon ID | Pt_10:11722353-11722361:- |
| Species | Populus Trichocarpa | Coordinates | 10:11722353..11722361 |
| Microexon Cluster ID | MEP21 |
| Size | 9 |
| Phase | 1 |
| Pfam Domain Motif | AP2 |
| Structure of Microexon-tag (flanking exon, microexon, flanking exon sizes) | 49,9,50 |
| Microexon location in the Microexon-tag | 2 |
| Microexon-tag DNA Seq | TGGGAYAAYAGYWSYWGRARWGARRGYCARAVYARGAARGGAARRCAAGTTTAYYTRGGKGSWTATGAYRAKGARGARRMWGCWGCWMGRGCWTATGAYYTDGCWGCW |
| Logo of Microexon-tag DNA Seq |  |
| Alignment of exons |  |
| Microexon DNA seq | TTTATCTTG |
| Microexon Amino Acid seq | VYLG |
| Microexon-tag DNA Seq | TGGGATAAAGGAACTTGGAATCCAACACAGAGAAAGAAGGGTAAACAAGTTTATCTTGGAGCTTATGATGAAGAAGAATCCGCTGCAAGAGCATATGATTTAGCTGCT |
| Microexon-tag Amino Acid Seq | WDKGTWNPTQRKKGKQVYLGAYDEEESAARAYDLAA |
| Microexon-tag spanning region | 11722187-11722547 |
| Microexon-tag prediction score | 0.9296 |
| Overlapped with the annotated transcript (%) | 100 |
| New Transcript ID | Potri.010G092800.1.v4.1x |
| Reference Transcript ID | Potri.010G092800.1.v4.1 |
| Gene ID | Potri.010G092800.v4.1 |
| Gene Name | NA |
| Transcript ID | Potri.010G092800.1.v4.1 |
| Protein ID | |
| Gene ID | Potri.010G092800.v4.1 |
| Gene Name | |
| Pfam domain motif | AP2 |
| Motif E-value | 9.70E-12 |
| Motif start | 79 |
| Motif end | 138 |
| Protein seq | >Potri.010G092800.1.v4.1 MEMTRNTGDQISLGRRRLCMIEEERRAGEAGKCIKRRRRDPSTFALSCNINDQQSDQQQQQQSLGDRTAAVATTVKRSSR FRGVSRHRWTGRFEAHLWDKGTWNPTQRKKGKQVYLGAYDEEESAARAYDLAALKYWGTSTFTNFPASDYEKEIEIMKTV TKEEYLASLRRRSSGFSRGVSKYRGVARHHHNGRWEARIGRVFGNKYLYLGTYSTQEEAAHAYDIAAIEYRGINAVTNFD LSTYIRWLKPEASLPAPQTQESKPASDPLPMATFSNHLPSEKPTQLSVLQMDPSLMDNLNTPKNEDIFHRKTLPVSPLTR SSSSTALSLLFKSSIFKELVEKNLNTTSEEIEENDSKNPHNGNNNAGEAFYDGLSPIPHTGTSTEDPFLCSEQGETNTLP PYSGMEQSLWNGALSMPSRFR* |
| CDS seq | >Potri.010G092800.1.v4.1 ATGGAGATGACAAGGAATACTGGCGATCAGATAAGCCTAGGAAGGCGTCGCTTGTGCATGATAGAAGAAGAAAGGAGAGC CGGGGAGGCTGGTAAGTGTATTAAAAGACGACGAAGAGACCCTTCCACATTTGCATTAAGCTGCAATATTAATGATCAAC AAAGTGACCAGCAGCAGCAGCAACAGTCACTTGGTGATCGAACTGCAGCTGTTGCCACTACTGTCAAGAGAAGTTCAAGA TTTCGGGGAGTTAGCAGGCACCGTTGGACCGGACGATTTGAAGCTCATTTATGGGATAAAGGAACTTGGAATCCAACACA GAGAAAGAAGGGTAAACAAGTTTATCTTGGAGCTTATGATGAAGAAGAATCCGCTGCAAGAGCATATGATTTAGCTGCTC TCAAGTACTGGGGAACGTCAACTTTCACAAATTTTCCGGCGTCTGACTACGAGAAAGAGATTGAAATAATGAAAACGGTA ACCAAAGAAGAATATCTAGCCTCCTTGAGAAGGAGAAGCAGTGGGTTTTCAAGAGGTGTATCCAAATACAGAGGAGTTGC TAGGCACCATCACAATGGGAGATGGGAAGCAAGGATAGGGAGAGTGTTTGGAAACAAATATCTTTATCTTGGCACGTACA GCACTCAAGAGGAAGCTGCTCATGCCTATGATATAGCAGCCATTGAATACAGAGGGATCAATGCTGTAACCAATTTCGAT TTAAGCACATACATCAGATGGCTGAAGCCAGAAGCCAGTCTTCCTGCACCTCAAACTCAAGAATCGAAGCCAGCTTCAGA CCCCCTGCCGATGGCAACCTTCTCCAATCACCTTCCGAGCGAGAAACCAACCCAGCTATCCGTTCTCCAGATGGACCCTT CTTTAATGGATAATTTAAACACCCCTAAAAACGAGGACATTTTTCACAGGAAGACGCTTCCCGTTAGCCCCCTCACTAGG TCATCCTCCTCGACTGCCCTTAGCCTCCTCTTTAAATCTTCAATATTCAAAGAGCTTGTGGAGAAGAACTTGAATACCAC CTCCGAAGAAATTGAAGAAAATGATTCGAAAAACCCGCATAATGGCAACAACAATGCTGGGGAGGCATTCTATGATGGAC TCAGCCCCATTCCTCACACAGGCACTTCAACCGAGGATCCGTTCTTGTGCTCAGAGCAAGGAGAGACAAATACATTGCCA CCATACAGTGGAATGGAGCAATCTCTTTGGAATGGAGCCTTGAGCATGCCTTCTCGTTTCCGTTAA |
Pt_10:11722353-11722361:- does not have available information here.