| Microexon ID | Pt_1:1365401-1365409:+ |
| Species | Populus Trichocarpa | Coordinates | 1:1365401..1365409 |
| Microexon Cluster ID | MEP21 |
| Size | 9 |
| Phase | 1 |
| Pfam Domain Motif | AP2 |
| Structure of Microexon-tag (flanking exon, microexon, flanking exon sizes) | 49,9,50 |
| Microexon location in the Microexon-tag | 2 |
| Microexon-tag DNA Seq | TGGGAYAAYAGYWSYWGRARWGARRGYCARAVYARGAARGGAARRCAAGTTTAYYTRGGKGSWTATGAYRAKGARGARRMWGCWGCWMGRGCWTATGAYYTDGCWGCW |
| Logo of Microexon-tag DNA Seq |  |
| Alignment of exons |  |
| Microexon DNA seq | TCTATTTAG |
| Microexon Amino Acid seq | VYLG |
| Microexon-tag DNA Seq | TGGGATAATAGTTGCAGAAGAGAAGGTCAATCCAGGAAAGGAAGACAAGTCTATTTAGGTGGCTATGACAAAGAAGACAAGGCTGCTAGGGCTTATGATCTTGCTGCA |
| Microexon-tag Amino Acid Seq | WDNSCRREGQSRKGRQVYLGGYDKEDKAARAYDLAA |
| Microexon-tag spanning region | 1365231-1365554 |
| Microexon-tag prediction score | 0.9695 |
| Overlapped with the annotated transcript (%) | 100 |
| New Transcript ID | Potri.001G018400.1.v4.1x |
| Reference Transcript ID | Potri.001G018400.1.v4.1 |
| Gene ID | Potri.001G018400.v4.1 |
| Gene Name | NA |
| Transcript ID | Potri.001G018400.1.v4.1 |
| Protein ID | |
| Gene ID | Potri.001G018400.v4.1 |
| Gene Name | |
| Pfam domain motif | AP2 |
| Motif E-value | 2.50E-10 |
| Motif start | 167 |
| Motif end | 224 |
| Protein seq | >Potri.001G018400.1.v4.1 MNSNNWLSFPLSPTHPTLPAHLHASHPHQFSLGLVNDNMENPFQTQEWSLLNTQGNNEVPKVADFLGVSKSENQSDLVAF NEIQASDSEYLFSSNSLLPVQNAVVAASTNYEFQENPSNLQSLTLSMGSASGKGSKCETSGDNITNSVEAAAPRRTLDTF GQRTSIYRGVTRHRWTGRYEAHLWDNSCRREGQSRKGRQVYLGGYDKEDKAARAYDLAALKYWGTSTTTNFPISNYEKEL EDMKNMTRQEFVASIRRKSSGFSRGASMYRGVTRHHQHGRWQARIGRVAGNKDLYLGTFSTEEEAAEAYDIAAIKFRGLN AVTNFDMNRYDVKSILESNSLPIGGGAAKRLKEAQAIESSQKREEMIALGSSYPYGSTSSSSRQQAYSLMQKPFEQPQPL LTLQNQDISQYTQDSSFQQNYLQTQLHLHQLSAGSNFLHNNQSSQNPQYYNSYIQNNPTLLHGLWNMGSSSSLMENNGSS SGSYSTVGYLGNGLGMATNSTGSNAVAEELPLVKIDYDMPSGGYGSWSGESVQGSNPGVFTMWNE* |
| CDS seq | >Potri.001G018400.1.v4.1 ATGAATTCGAACAACTGGCTTTCATTTCCTCTTTCTCCTACTCATCCTACCTTGCCTGCCCATCTACATGCATCTCACCC TCATCAATTCTCTCTAGGATTAGTCAATGATAATATGGAAAACCCATTTCAAACTCAAGAGTGGAGTCTTCTTAACACTC AAGGCAACAATGAAGTGCCAAAGGTTGCAGATTTTCTTGGTGTAAGTAAATCTGAGAATCAATCAGATCTCGTAGCCTTC AATGAAATTCAAGCCAGTGATTCTGAGTATCTCTTTTCAAGCAATAGTCTGTTGCCGGTCCAAAATGCTGTGGTAGCCGC CAGTACTAACTACGAATTTCAAGAAAATCCTAGCAATTTGCAGTCATTAACATTGTCTATGGGCAGTGCTAGTGGTAAGG GTTCTAAATGTGAAACCAGTGGTGATAATATTACTAATTCTGTCGAAGCTGCTGCTCCAAGAAGGACTTTGGATACATTT GGTCAAAGAACATCCATCTATCGTGGTGTAACAAGGCATCGATGGACAGGAAGGTATGAAGCTCATTTATGGGATAATAG TTGCAGAAGAGAAGGTCAATCCAGGAAAGGAAGACAAGTCTATTTAGGTGGCTATGACAAAGAAGACAAGGCTGCTAGGG CTTATGATCTTGCTGCACTTAAGTACTGGGGAACATCGACCACTACCAATTTTCCTATCAGCAACTATGAGAAAGAACTA GAGGACATGAAGAACATGACCAGACAAGAATTTGTGGCCTCCATTAGAAGGAAGAGTAGTGGCTTCTCTAGGGGTGCATC CATGTATCGTGGAGTCACAAGGCATCACCAACATGGAAGATGGCAAGCAAGAATTGGTAGAGTTGCAGGAAACAAAGATC TCTACTTGGGAACTTTTAGCACTGAGGAGGAGGCTGCAGAAGCTTATGACATAGCAGCAATAAAGTTTAGAGGGCTTAAT GCAGTGACTAATTTTGACATGAATCGATATGATGTGAAAAGCATTCTTGAGAGCAATAGTTTGCCAATTGGAGGAGGGGC AGCCAAAAGGCTAAAGGAGGCTCAAGCAATCGAATCGTCACAAAAACGAGAAGAAATGATTGCTCTTGGATCAAGTTATC CATATGGATCAACTTCAAGCTCTAGTCGACAACAAGCTTACTCTCTAATGCAGAAACCATTTGAGCAACCTCAACCTTTA CTTACTCTACAAAATCAAGACATTTCTCAGTACACTCAAGATTCTTCATTTCAGCAAAATTACCTTCAAACACAGCTTCA TTTGCACCAGCTATCTGCAGGGTCTAATTTCCTGCATAATAACCAATCAAGCCAAAATCCTCAGTATTACAACAGCTATA TCCAAAACAATCCCACTTTGCTTCATGGATTGTGGAACATGGGTTCTTCATCATCTCTAATGGAGAATAATGGCAGTTCT AGTGGGAGTTATAGTACTGTCGGTTATCTGGGAAATGGGTTGGGAATGGCTACCAATTCAACAGGGTCTAATGCAGTAGC TGAGGAACTTCCACTTGTTAAGATAGATTATGATATGCCTTCTGGTGGCTATGGAAGTTGGTCTGGGGAATCAGTTCAGG GATCCAACCCAGGTGTTTTTACAATGTGGAATGAGTGA |
Pt_1:1365401-1365409:+ does not have available information here.