
Microexon ID | Ps_NC_039368.1:64770913-64770921:- |
Species | Papaver somniferum | Coordinates | NC_039368.1:64770913..64770921 |
Microexon Cluster ID | MEP21 |
Size | 9 |
Phase | 1 |
Pfam Domain Motif | AP2 |
Structure of Microexon-tag (flanking exon, microexon, flanking exon sizes) | 49,9,50 |
Microexon location in the Microexon-tag | 2 |
Microexon-tag DNA Seq | TGGGAYAAYAGYWSYWGRARWGARRGYCARAVYARGAARGGAARRCAAGTTTAYYTRGGKGSWTATGAYRAKGARGARRMWGCWGCWMGRGCWTATGAYYTDGCWGCW |
Logo of Microexon-tag DNA Seq | ![]() |
Alignment of exons | ![]() |
Microexon DNA seq | TTTACTTGG |
Microexon Amino Acid seq | VYLG |
Microexon-tag DNA Seq | TGGGATAAAAGTACATGGAATCAAAATCAAAATAAGAAGGGAAAGCAAGTTTACTTGGGTGCATATGATGATGAGGAGGCTGCAGCTAGAGCGTATGATCTTGCTGCT |
Microexon-tag Amino Acid Seq | WDKSTWNQNQNKKGKQVYLGAYDDEEAAARAYDLAA |
Microexon-tag spanning region | 64770720-64771121 |
Microexon-tag prediction score | 0.9677 |
Overlapped with the annotated transcript (%) | 100 |
New Transcript ID | XM_026568978.1x |
Reference Transcript ID | XM_026568978.1 |
Gene ID | NA |
Gene Name | NA |
Transcript ID | XM_026568978.1 |
Protein ID | XP_026424763.1 |
Gene ID | LOC113321100 |
Gene Name | NA |
Pfam domain motif | AP2 |
Motif E-value | 1.2e-13 |
Motif start | 75 |
Motif end | 133 |
Protein seq | >XP_026424763.1 MATTSSSDLGSGLKAEGGEATETVPTTATIAMANNNYQKLLLYRGLKRSRKDRGCTAKERISKMPPCAAGKRSSIYRGVT RHRWTGRYEAHLWDKSTWNQNQNKKGKQVYLGAYDDEEAAARAYDLAALKYWGPGTLINFPVSDYSRDLDEMQNISREEY LASLRRKSSGFSRGMAKYRGLSRPCQSSRWESSLSQIGGLEQFSGSLHYGEGENAESEYPGRFCIERKVDLTGYIKWWGP NKTCRLSKSFDETKHGSLEDIGGGEWGLQPTEPYQMPRLGLSHGPAGKKKHQEVSSALNILSQSAAYKSLQEKASKQDND ENTNNENTNTEMPFRDPVPLESTSGDGVSGGGNERHLMRGATTLGMSWLPFQRTTLSPLRTPFLSAPLMTNYSTIDPLAD PILWSSLVSHPTPGLSHTSAEEVTKTETSSSYNCFNQEEH* |
CDS seq | >XM_026568978.1 ATGGCTACTACTTCATCTTCAGATCTTGGATCAGGATTGAAAGCTGAAGGAGGAGAAGCTACAGAAACAGTTCCAACAAC AGCAACTATAGCGATGGCAAATAATAATTATCAGAAACTTCTTCTTTACAGAGGATTAAAGAGATCAAGAAAAGATAGAG GGTGTACAGCTAAAGAAAGAATTAGTAAAATGCCACCTTGTGCAGCTGGAAAAAGGAGCTCCATTTATAGAGGTGTTACT AGGCATAGATGGACTGGGCGTTATGAAGCTCACCTTTGGGATAAAAGTACATGGAATCAAAATCAAAATAAGAAGGGAAA GCAAGTTTACTTGGGTGCATATGATGATGAGGAGGCTGCAGCTAGAGCGTATGATCTTGCTGCTCTAAAATACTGGGGTC CTGGCACACTCATTAATTTTCCAGTTAGTGATTATTCAAGAGATCTGGATGAGATGCAAAACATTTCAAGAGAGGAATAT CTTGCATCTCTAAGAAGAAAGAGCAGTGGTTTCTCAAGAGGGATGGCTAAATACCGTGGGCTTTCTAGACCATGTCAAAG TAGTCGGTGGGAATCTTCCCTTAGTCAAATAGGAGGTCTGGAGCAATTTAGTGGAAGCTTACACTATGGTGAGGGTGAGA ATGCAGAAAGTGAATATCCAGGGAGGTTTTGCATAGAAAGAAAAGTTGACCTGACGGGTTACATCAAGTGGTGGGGGCCG AACAAAACCTGCCGTCTAAGTAAATCTTTCGATGAAACAAAGCATGGCAGTTTGGAAGATATTGGTGGTGGTGAGTGGGG TCTCCAGCCTACAGAGCCATACCAGATGCCTCGTTTAGGGCTTTCTCATGGCCCTGCAGGAAAGAAGAAGCATCAAGAAG TTTCTTCAGCTTTGAATATTTTATCGCAGTCTGCTGCCTACAAGAGTTTGCAAGAGAAAGCCTCAAAACAAGATAATGAT GAAAATACGAACAACGAGAACACAAATACAGAGATGCCATTTCGTGATCCTGTCCCTTTGGAATCAACTAGTGGAGATGG TGTTAGTGGTGGTGGGAATGAGAGACACCTGATGAGAGGAGCAACAACACTAGGCATGAGCTGGTTGCCATTCCAAAGGA CTACTCTGTCTCCGTTGAGAACTCCTTTCCTATCAGCACCACTCATGACTAACTACAGCACGATTGATCCCTTGGCGGAT CCTATTCTTTGGTCATCACTTGTTTCTCATCCGACACCTGGACTTTCTCATACCTCAGCAGAAGAGGTTACCAAAACCGA GACCAGCTCAAGTTACAACTGTTTTAACCAGGAAGAACATTAG |
Microexon DNA seq | TTTACTTGG |
Microexon Amino Acid seq | VYLG |
Microexon-tag DNA Seq | TGGGATAAAAGTACATGGAATCAAAATCAAAATAAGAAGGGAAAGCAAGTTTACTTGGGTGCATATGATGATGAGGAGGCTGCAGCTAGAGCGTATGATCTTGCTGCT |
Microexon-tag Amino Acid seq | WDKSTWNQNQNKKGKQVYLGAYDDEEAAARAYDLAA |
Transcript ID | XM_026568978.1 |
Gene ID | Ps.66125 |
Gene Name | NA |
Pfam domain motif | AP2 |
Motif E-value | 1.2e-13 |
Motif start | 75 |
Motif end | 133 |
Protein seq | >XM_026568978.1 MATTSSSDLGSGLKAEGGEATETVPTTATIAMANNNYQKLLLYRGLKRSRKDRGCTAKERISKMPPCAAGKRSSIYRGVT RHRWTGRYEAHLWDKSTWNQNQNKKGKQVYLGAYDDEEAAARAYDLAALKYWGPGTLINFPVSDYSRDLDEMQNISREEY LASLRRKSSGFSRGMAKYRGLSRPCQSSRWESSLSQIGGLEQFSGSLHYGEGENAESEYPGRFCIERKVDLTGYIKWWGP NKTCRLSKSFDETKHGSLEDIGGGEWGLQPTEPYQMPRLGLSHGPAGKKKHQEVSSALNILSQSAAYKSLQEKASKQDND ENTNNENTNTEMPFRDPVPLESTSGDGVSGGGNERHLMRGATTLGMSWLPFQRTTLSPLRTPFLSAPLMTNYSTIDPLAD PILWSSLVSHPTPGLSHTSAEEVTKTETSSSYNCFNQEEH* |
CDS seq | >XM_026568978.1 ATGGCTACTACTTCATCTTCAGATCTTGGATCAGGATTGAAAGCTGAAGGAGGAGAAGCTACAGAAACAGTTCCAACAAC AGCAACTATAGCGATGGCAAATAATAATTATCAGAAACTTCTTCTTTACAGAGGATTAAAGAGATCAAGAAAAGATAGAG GGTGTACAGCTAAAGAAAGAATTAGTAAAATGCCACCTTGTGCAGCTGGAAAAAGGAGCTCCATTTATAGAGGTGTTACT AGGCATAGATGGACTGGGCGTTATGAAGCTCACCTTTGGGATAAAAGTACATGGAATCAAAATCAAAATAAGAAGGGAAA GCAAGTTTACTTGGGTGCATATGATGATGAGGAGGCTGCAGCTAGAGCGTATGATCTTGCTGCTCTAAAATACTGGGGTC CTGGCACACTCATTAATTTTCCAGTTAGTGATTATTCAAGAGATCTGGATGAGATGCAAAACATTTCAAGAGAGGAATAT CTTGCATCTCTAAGAAGAAAGAGCAGTGGTTTCTCAAGAGGGATGGCTAAATACCGTGGGCTTTCTAGACCATGTCAAAG TAGTCGGTGGGAATCTTCCCTTAGTCAAATAGGAGGTCTGGAGCAATTTAGTGGAAGCTTACACTATGGTGAGGGTGAGA ATGCAGAAAGTGAATATCCAGGGAGGTTTTGCATAGAAAGAAAAGTTGACCTGACGGGTTACATCAAGTGGTGGGGGCCG AACAAAACCTGCCGTCTAAGTAAATCTTTCGATGAAACAAAGCATGGCAGTTTGGAAGATATTGGTGGTGGTGAGTGGGG TCTCCAGCCTACAGAGCCATACCAGATGCCTCGTTTAGGGCTTTCTCATGGCCCTGCAGGAAAGAAGAAGCATCAAGAAG TTTCTTCAGCTTTGAATATTTTATCGCAGTCTGCTGCCTACAAGAGTTTGCAAGAGAAAGCCTCAAAACAAGATAATGAT GAAAATACGAACAACGAGAACACAAATACAGAGATGCCATTTCGTGATCCTGTCCCTTTGGAATCAACTAGTGGAGATGG TGTTAGTGGTGGTGGGAATGAGAGACACCTGATGAGAGGAGCAACAACACTAGGCATGAGCTGGTTGCCATTCCAAAGGA CTACTCTGTCTCCGTTGAGAACTCCTTTCCTATCAGCACCACTCATGACTAACTACAGCACGATTGATCCCTTGGCGGAT CCTATTCTTTGGTCATCACTTGTTTCTCATCCGACACCTGGACTTTCTCATACCTCAGCAGAAGAGGTTACCAAAACCGA GACCAGCTCAAGTTACAACTGTTTTAACCAGGAAGAACATTAG |