
Microexon ID | Ps_NC_039368.1:56956718-56956726:+ |
Species | Papaver somniferum | Coordinates | NC_039368.1:56956718..56956726 |
Microexon Cluster ID | MEP21 |
Size | 9 |
Phase | 1 |
Pfam Domain Motif | AP2 |
Structure of Microexon-tag (flanking exon, microexon, flanking exon sizes) | 49,9,50 |
Microexon location in the Microexon-tag | 2 |
Microexon-tag DNA Seq | TGGGAYAAYAGYWSYWGRARWGARRGYCARAVYARGAARGGAARRCAAGTTTAYYTRGGKGSWTATGAYRAKGARGARRMWGCWGCWMGRGCWTATGAYYTDGCWGCW |
Logo of Microexon-tag DNA Seq | ![]() |
Alignment of exons | ![]() |
Microexon DNA seq | TTTATTTGG |
Microexon Amino Acid seq | VYLG |
Microexon-tag DNA Seq | TGGGATAAGAACTCATGGAATCCTATTCAGAACAAGAAAGGACGACAAGTTTATTTGGGTGCATATGATGATGAAGAAGCTGCTGCTCATACTTATGATCTTGCGGCT |
Microexon-tag Amino Acid Seq | WDKNSWNPIQNKKGRQVYLGAYDDEEAAAHTYDLAA |
Microexon-tag spanning region | 56956481-56956959 |
Microexon-tag prediction score | 0.9499 |
Overlapped with the annotated transcript (%) | 100 |
New Transcript ID | XM_026570839.1x |
Reference Transcript ID | XM_026570839.1 |
Gene ID | NA |
Gene Name | NA |
Transcript ID | XM_026570839.1 |
Protein ID | XP_026426624.1 |
Gene ID | LOC113322699 |
Gene Name | NA |
Pfam domain motif | AP2 |
Motif E-value | 1.4e-11 |
Motif start | 93 |
Motif end | 151 |
Protein seq | >XP_026426624.1 MMLMMMKRSPHSSDSCSSSSSSSSSSTNSSEIKPLTSLISTTNQLLVPLSPLPPPHTLPSKLKPVKPKTKRTRRTSNPEK AKFAACPGRRSSIYRGVTRHRWTGRYEAHLWDKNSWNPIQNKKGRQVYLGAYDDEEAAAHTYDLAALKYWGPDTILNFPF ITYQKDFDDMQLVTKEEYLASLRRRSSGFSRGVSKYRGVARHHHNGRWEARIGRVLGNKYLYLGTYSTQEEAAAAYDIAA IEHRGMNAVTNFDISHYSGLIKCTQPSPSPSPSPPQQLCQQYQQSPSCSYFAESHEMTSRILTPELPQSVNDHSPVMVDP MEDNAWSLCMDSGFNPLPVPNIDLEKSGELPDLFNDSGFEDNIECLFEGINATKEEFGSLEEKDNALNFDTFFNSSIDFD SGDLLGSLGVEGEENLNSNGTSARNASASVPYPFPIRICS* |
CDS seq | >XM_026570839.1 ATGATGTTGATGATGATGAAGAGGTCTCCTCATAGTTCTGATTCTTGTTCTTCATCTTCTTCTTCCTCCTCTTCTAGTAC AAATTCATCTGAAATTAAACCTCTTACTTCTCTTATTAGTACTACTAATCAGTTATTAGTACCATTATCTCCTCTTCCTC CTCCTCATACTCTTCCATCAAAACTAAAACCAGTCAAACCCAAGACCAAACGCACTAGAAGAACTTCTAATCCTGAAAAG GCTAAGTTTGCTGCTTGCCCTGGCAGAAGAAGCTCCATTTACAGAGGAGTTACCAGGCATAGATGGACAGGAAGATATGA AGCTCATCTATGGGATAAGAACTCATGGAATCCTATTCAGAACAAGAAAGGACGACAAGTTTATTTGGGTGCATATGATG ATGAAGAAGCTGCTGCTCATACTTATGATCTTGCGGCTCTCAAATACTGGGGCCCTGATACTATCCTCAATTTCCCGTTC ATCACATATCAAAAGGATTTCGATGACATGCAACTAGTGACCAAGGAAGAGTATTTAGCTTCACTGCGTCGTCGCAGTAG TGGATTTTCAAGGGGTGTATCTAAATATCGTGGCGTCGCAAGGCACCACCACAATGGGCGCTGGGAAGCAAGAATTGGGC GTGTTTTGGGCAACAAATATCTCTACTTGGGAACATATAGTACACAAGAAGAAGCTGCAGCTGCTTATGACATTGCGGCA ATAGAGCATAGAGGAATGAATGCAGTGACTAATTTCGATATTAGTCATTACAGTGGCCTAATAAAATGCACACAACCATC ACCATCACCGTCTCCATCTCCGCCACAACAACTGTGTCAACAATATCAACAGTCACCCTCTTGTTCATATTTTGCTGAAT CACATGAAATGACATCTAGAATCCTTACACCTGAATTACCCCAATCTGTCAATGATCACTCTCCGGTAATGGTAGACCCG ATGGAGGATAACGCATGGAGTCTTTGCATGGATTCAGGATTCAACCCACTACCAGTGCCCAACATTGATCTTGAAAAATC AGGCGAGCTACCTGATTTGTTTAATGATAGCGGGTTTGAAGATAACATTGAGTGTCTATTTGAAGGGATTAACGCTACTA AGGAGGAATTCGGAAGTCTTGAAGAGAAAGATAATGCACTTAATTTTGATACTTTCTTTAACAGCTCAATTGATTTTGAT AGTGGAGATTTATTGGGAAGTCTAGGAGTGGAAGGAGAAGAGAATCTGAACAGTAATGGTACTTCAGCAAGGAATGCATC AGCATCAGTTCCATATCCTTTTCCTATCAGAATTTGTTCTTAA |
Microexon DNA seq | TTTATTTGG |
Microexon Amino Acid seq | VYLG |
Microexon-tag DNA Seq | TGGGATAAGAACTCATGGAATCCTATTCAGAACAAGAAAGGACGACAAGTTTATTTGGGTGCATATGATGATGAAGAAGCTGCTGCTCATACTTATGATCTTGCGGCT |
Microexon-tag Amino Acid seq | WDKNSWNPIQNKKGRQVYLGAYDDEEAAAHTYDLAA |
Transcript ID | XM_026570839.1 |
Gene ID | Ps.65900 |
Gene Name | NA |
Pfam domain motif | AP2 |
Motif E-value | 1.4e-11 |
Motif start | 93 |
Motif end | 151 |
Protein seq | >XM_026570839.1 MMLMMMKRSPHSSDSCSSSSSSSSSSTNSSEIKPLTSLISTTNQLLVPLSPLPPPHTLPSKLKPVKPKTKRTRRTSNPEK AKFAACPGRRSSIYRGVTRHRWTGRYEAHLWDKNSWNPIQNKKGRQVYLGAYDDEEAAAHTYDLAALKYWGPDTILNFPF ITYQKDFDDMQLVTKEEYLASLRRRSSGFSRGVSKYRGVARHHHNGRWEARIGRVLGNKYLYLGTYSTQEEAAAAYDIAA IEHRGMNAVTNFDISHYSGLIKCTQPSPSPSPSPPQQLCQQYQQSPSCSYFAESHEMTSRILTPELPQSVNDHSPVMVDP MEDNAWSLCMDSGFNPLPVPNIDLEKSGELPDLFNDSGFEDNIECLFEGINATKEEFGSLEEKDNALNFDTFFNSSIDFD SGDLLGSLGVEGEENLNSNGTSARNASASVPYPFPIRICS* |
CDS seq | >XM_026570839.1 ATGATGTTGATGATGATGAAGAGGTCTCCTCATAGTTCTGATTCTTGTTCTTCATCTTCTTCTTCCTCCTCTTCTAGTAC AAATTCATCTGAAATTAAACCTCTTACTTCTCTTATTAGTACTACTAATCAGTTATTAGTACCATTATCTCCTCTTCCTC CTCCTCATACTCTTCCATCAAAACTAAAACCAGTCAAACCCAAGACCAAACGCACTAGAAGAACTTCTAATCCTGAAAAG GCTAAGTTTGCTGCTTGCCCTGGCAGAAGAAGCTCCATTTACAGAGGAGTTACCAGGCATAGATGGACAGGAAGATATGA AGCTCATCTATGGGATAAGAACTCATGGAATCCTATTCAGAACAAGAAAGGACGACAAGTTTATTTGGGTGCATATGATG ATGAAGAAGCTGCTGCTCATACTTATGATCTTGCGGCTCTCAAATACTGGGGCCCTGATACTATCCTCAATTTCCCGTTC ATCACATATCAAAAGGATTTCGATGACATGCAACTAGTGACCAAGGAAGAGTATTTAGCTTCACTGCGTCGTCGCAGTAG TGGATTTTCAAGGGGTGTATCTAAATATCGTGGCGTCGCAAGGCACCACCACAATGGGCGCTGGGAAGCAAGAATTGGGC GTGTTTTGGGCAACAAATATCTCTACTTGGGAACATATAGTACACAAGAAGAAGCTGCAGCTGCTTATGACATTGCGGCA ATAGAGCATAGAGGAATGAATGCAGTGACTAATTTCGATATTAGTCATTACAGTGGCCTAATAAAATGCACACAACCATC ACCATCACCGTCTCCATCTCCGCCACAACAACTGTGTCAACAATATCAACAGTCACCCTCTTGTTCATATTTTGCTGAAT CACATGAAATGACATCTAGAATCCTTACACCTGAATTACCCCAATCTGTCAATGATCACTCTCCGGTAATGGTAGACCCG ATGGAGGATAACGCATGGAGTCTTTGCATGGATTCAGGATTCAACCCACTACCAGTGCCCAACATTGATCTTGAAAAATC AGGCGAGCTACCTGATTTGTTTAATGATAGCGGGTTTGAAGATAACATTGAGTGTCTATTTGAAGGGATTAACGCTACTA AGGAGGAATTCGGAAGTCTTGAAGAGAAAGATAATGCACTTAATTTTGATACTTTCTTTAACAGCTCAATTGATTTTGAT AGTGGAGATTTATTGGGAAGTCTAGGAGTGGAAGGAGAAGAGAATCTGAACAGTAATGGTACTTCAGCAAGGAATGCATC AGCATCAGTTCCATATCCTTTTCCTATCAGAATTTGTTCTTAA |